Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150006048

Identifier: 150006048

GI number: 150006048

Start: 4405069

End: 4406427

Strand: Reverse

Name: 150006048

Synonym: BVU_3552

Alternate gene names: NA

Gene position: 4406427-4405069 (Counterclockwise)

Preceding gene: 150006049

Following gene: 150006045

Centisome position: 85.34

GC content: 46.28

Gene sequence:

>1359_bases
ATGGCAAAGATAGTGAATATTTCAGAAATTCACCCTACTTTGGGTTTTACAGAATTTGATATTCTGGAAAAATACCGCAA
GAGTTTTAATGAGAGTGAGCTTGGCAAGCTTCATTCGGTCTTTCCGTTTGAATGTATGGCAAAAGCCGCCGGCCTGTCGG
ACCGGCGCCTGGGACGCAGGAACAGATTCAGTCCTTCCGCAAAGATCGCCCTTATGGTCCTGAAGGCATACACCGGATTC
TCCGACAGGCAACTGGTGGAACATCTGAACGGGAACATACACTACCAGATTTTCTGTGGAATTATGATTCCCCCGTCCCT
TCCCATAACCAACTTCAAGATAGTCAGTGCCATCCGTAATGAGATAGCATCCCGCCTTGACATTGATTCTTTCCAGGAGC
TCCTGGCTTCACACTGGAAACCTTATCTTGATAACCTTCACGTCTGCATGACCGATGCCACATGCTATGAAAGCCACATG
CGTTTTCCTACGGACATGAAACTCCTTTGGGAAAGCCTCGAATGGCTCTACAGGCATATATGCCGGCATTGCAGGGAGCT
GGGCATAAGGCGTCCGCGCAACAAATACAGGAATGTGGCGGAATCCTATCTGTCCTACTGCAAGAAAAGAAAGAGGAGAG
CTTCAAGGGCAAGAATGCTTAAGCGCCGTATGATCAAGCTTCTTGAAAAGCTCCTCAGTCAAAGGGATGGGATCCATAGC
GAGTACGGTGCTTTACTCCGATATACCCAGGATTATCATAAGCGTCTTTCCATCATCAGAAAGGTGCTTGTACAAGAAAA
GGAAATGTTTGAAGGGCGGAAAGTCAGTGACCGCATCGTCAGCATTGACCGTCATTATGTACGTCCCATCGTCAGAGGCA
AGGAAACCAAGTCCGTCGAGTTCGGTGCAAAGGTCAATAATATACAGATAGACGGCATATCGTTCATCGAACACCTCTCG
TTCAAGGCATTCAATGAGGGTATACGCTTGAAGGACTGTATCCGCATGCAGCAGAAGCTTATGAATGTAAGGGTAAGATG
TGTGGCTGCCGATTCCATATATGCCAATAATGCCAACAGAAAGTTCTGTACAAAATATGGGATATCCACATCCTTTGTGC
GCAAGGGAAGGGCGGCCAAAGATGAGCCTTTGAGGAAGGTGCTTAGAAGCGAACTCTCAAAAGAAAGGGCAACACGGCTT
GAAGGAAGCTTCGGCACTCAAAAGCAACATTACTCGCTCTCAAGGATAAAGGCCAGAAACAGGAAGACGGAAATACTGTG
GATTTTCTTTGGAATACATACGGCAAATGCCATACTGATAATAGAAAAAATCAGAAACAAAACAGCTAAAGCAGCATGA

Upstream 100 bases:

>100_bases
CAAAGTATTGCGAATTAGTTGGCTTTTTTGTATCTTTAGGTATTCCCCCGAAAATAAGATTTGACGGCCAAAACGGGGGA
AATATCCAAACTAATAAGAT

Downstream 100 bases:

>100_bases
TATGATTTTACTCACAGAATCAGAAGAGGTCATCAGACTTCTTCCGGAACGTCATGTCCTGTCGGATAGAATTATGTGAG
AAAGCACGGAAAAATGACAA

Product: putative transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; LOW QUALITY PROTEIN Transposase; Transposase IS5 Family; IS5 Family Transposase; Transposase IS5 Family Protein

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MAKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRRNRFSPSAKIALMVLKAYTGF
SDRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRNEIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHM
RFPTDMKLLWESLEWLYRHICRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHS
EYGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVEFGAKVNNIQIDGISFIEHLS
FKAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANRKFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRL
EGSFGTQKQHYSLSRIKARNRKTEILWIFFGIHTANAILIIEKIRNKTAKAA

Sequences:

>Translated_452_residues
MAKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRRNRFSPSAKIALMVLKAYTGF
SDRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRNEIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHM
RFPTDMKLLWESLEWLYRHICRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHS
EYGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVEFGAKVNNIQIDGISFIEHLS
FKAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANRKFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRL
EGSFGTQKQHYSLSRIKARNRKTEILWIFFGIHTANAILIIEKIRNKTAKAA
>Mature_451_residues
AKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRRNRFSPSAKIALMVLKAYTGFS
DRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRNEIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHMR
FPTDMKLLWESLEWLYRHICRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHSE
YGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVEFGAKVNNIQIDGISFIEHLSF
KAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANRKFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRLE
GSFGTQKQHYSLSRIKARNRKTEILWIFFGIHTANAILIIEKIRNKTAKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52857; Mature: 52725

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRR
CCCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHCCCC
NRFSPSAKIALMVLKAYTGFSDRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRN
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHH
EIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHMRFPTDMKLLWESLEWLYRHI
HHHHHCCHHHHHHHHHHHCCHHHCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHH
CRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EYGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
FGAKVNNIQIDGISFIEHLSFKAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANR
CCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECHHEECCCCC
KFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRLEGSFGTQKQHYSLSRIKARN
HHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
RKTEILWIFFGIHTANAILIIEKIRNKTAKAA
CCCEEEEEEEEHHHCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKIVNISEIHPTLGFTEFDILEKYRKSFNESELGKLHSVFPFECMAKAAGLSDRRLGRR
CCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCHHHCCCC
NRFSPSAKIALMVLKAYTGFSDRQLVEHLNGNIHYQIFCGIMIPPSLPITNFKIVSAIRN
CCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHH
EIASRLDIDSFQELLASHWKPYLDNLHVCMTDATCYESHMRFPTDMKLLWESLEWLYRHI
HHHHHCCHHHHHHHHHHHCCHHHCCCEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHH
CRHCRELGIRRPRNKYRNVAESYLSYCKKRKRRASRARMLKRRMIKLLEKLLSQRDGIHS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
EYGALLRYTQDYHKRLSIIRKVLVQEKEMFEGRKVSDRIVSIDRHYVRPIVRGKETKSVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
FGAKVNNIQIDGISFIEHLSFKAFNEGIRLKDCIRMQQKLMNVRVRCVAADSIYANNANR
CCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECHHEECCCCC
KFCTKYGISTSFVRKGRAAKDEPLRKVLRSELSKERATRLEGSFGTQKQHYSLSRIKARN
HHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
RKTEILWIFFGIHTANAILIIEKIRNKTAKAA
CCCEEEEEEEEHHHCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA