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The map label for this gene is yqhC [C]

Identifier: 150005601

GI number: 150005601

Start: 3904919

End: 3905818

Strand: Direct

Name: yqhC [C]

Synonym: BVU_3089

Alternate gene names: 150005601

Gene position: 3904919-3905818 (Clockwise)

Preceding gene: 150005600

Following gene: 150005602

Centisome position: 75.63

GC content: 46.11

Gene sequence:

>900_bases
ATGCAAGAGACTATGTTGGACTTGAGGACTGTATATGAATGTAACCGCTGTCTGGGTTGCAAGACATTGCATCCGCAGGT
GGGCATCATCAATCTGGAGAATCCTTCATTGGAAGAGGATGCGGTGAAGTTTGAATTCTATGCTGTCTTGCTGATTGAGG
ATTGTCCGGGCGGTTGTTGCTGCTGCGGACGGAAATACTATGATTACTCCAATGCTACCATGGTGTTTCTCACTCCCGGC
GAGATCTTTCGTATGAGTAAGGAGAATACGTTGCCGGATAAAGGATATCTTTTGGCATTTCATCCTGACCTGTTGTTCCG
CACCTCACTGAAGAATCATATTAAAAATTATACCTTTTTCCATTATCGCAAGGAAGAAGCGCTGCATCTTTCGCGGCGTG
AGACAGAGAAAGTGACGTGTTGCCTCTCGAATATAGAGGATGAGTTGCATCATCCCATTGATACTCATAGCAGTATTATT
CTTTCCCGGCATATAGAACTTCTGTTGGATTATTGCACCCGGTATTACGAACGCCAGTTTATTACCCGTGAGAATAAGAA
CAAGGCTCTTTTGGAAAACATGGAACGTTTGTTTGTGGAATATATCGCATCCGGAAGGTTGCAAGGCGGCAAGTTGCCCA
CATCCGGCTATATGGCGGGAGAGCTTGATTTGTCTGTCGCTTACTTCGATGATCTGCTGAAGTTTGAAACCGGCAAGACT
TTGGAGGAATATTTGCAACTGAAGCGGCTGGATATAGCCAGGCACATGTTGTTGCAGGACGGTCATACGCCTGCTGCTGT
GGCACGGAAGTTAGGCTATCCTAATGTGCAGTGCTTCAGTGTGCTTTTCAAGAAAATAACAGGTGTCGCCCCCAGTGATT
ACCGGCTCTCGCAGAATTGA

Upstream 100 bases:

>100_bases
CCGCAGCATTTCTGCCGGTTGTTCAAGAAGCGTGTGGGCTGTACACCGAATGAATATCGGGCACAAAACCTTCTTTTATA
GTATTCTGTCGTAACAAGCA

Downstream 100 bases:

>100_bases
TAACCGGGTTGCAGTACCATGTTTTTGTGATACAGTTCCCTTCTGTAAAAATGGTAATTCTATCTGTAATTTATCTACAA
AGAATGAATGGGGCCTGGCT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcriptional Regulator; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; Transcriptional Regulator AraC Type

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MQETMLDLRTVYECNRCLGCKTLHPQVGIINLENPSLEEDAVKFEFYAVLLIEDCPGGCCCCGRKYYDYSNATMVFLTPG
EIFRMSKENTLPDKGYLLAFHPDLLFRTSLKNHIKNYTFFHYRKEEALHLSRRETEKVTCCLSNIEDELHHPIDTHSSII
LSRHIELLLDYCTRYYERQFITRENKNKALLENMERLFVEYIASGRLQGGKLPTSGYMAGELDLSVAYFDDLLKFETGKT
LEEYLQLKRLDIARHMLLQDGHTPAAVARKLGYPNVQCFSVLFKKITGVAPSDYRLSQN

Sequences:

>Translated_299_residues
MQETMLDLRTVYECNRCLGCKTLHPQVGIINLENPSLEEDAVKFEFYAVLLIEDCPGGCCCCGRKYYDYSNATMVFLTPG
EIFRMSKENTLPDKGYLLAFHPDLLFRTSLKNHIKNYTFFHYRKEEALHLSRRETEKVTCCLSNIEDELHHPIDTHSSII
LSRHIELLLDYCTRYYERQFITRENKNKALLENMERLFVEYIASGRLQGGKLPTSGYMAGELDLSVAYFDDLLKFETGKT
LEEYLQLKRLDIARHMLLQDGHTPAAVARKLGYPNVQCFSVLFKKITGVAPSDYRLSQN
>Mature_299_residues
MQETMLDLRTVYECNRCLGCKTLHPQVGIINLENPSLEEDAVKFEFYAVLLIEDCPGGCCCCGRKYYDYSNATMVFLTPG
EIFRMSKENTLPDKGYLLAFHPDLLFRTSLKNHIKNYTFFHYRKEEALHLSRRETEKVTCCLSNIEDELHHPIDTHSSII
LSRHIELLLDYCTRYYERQFITRENKNKALLENMERLFVEYIASGRLQGGKLPTSGYMAGELDLSVAYFDDLLKFETGKT
LEEYLQLKRLDIARHMLLQDGHTPAAVARKLGYPNVQCFSVLFKKITGVAPSDYRLSQN

Specific function: Unknown

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34614; Mature: 34614

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQETMLDLRTVYECNRCLGCKTLHPQVGIINLENPSLEEDAVKFEFYAVLLIEDCPGGCC
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHEEEEEEEEEEEECCCCCEE
CCGRKYYDYSNATMVFLTPGEIFRMSKENTLPDKGYLLAFHPDLLFRTSLKNHIKNYTFF
ECCCCEEECCCCEEEEECCHHHEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEE
HYRKEEALHLSRRETEKVTCCLSNIEDELHHPIDTHSSIILSRHIELLLDYCTRYYERQF
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITRENKNKALLENMERLFVEYIASGRLQGGKLPTSGYMAGELDLSVAYFDDLLKFETGKT
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECEEEEHHHHHHHHHHHCCCCH
LEEYLQLKRLDIARHMLLQDGHTPAAVARKLGYPNVQCFSVLFKKITGVAPSDYRLSQN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEECCC
>Mature Secondary Structure
MQETMLDLRTVYECNRCLGCKTLHPQVGIINLENPSLEEDAVKFEFYAVLLIEDCPGGCC
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHEEEEEEEEEEEECCCCCEE
CCGRKYYDYSNATMVFLTPGEIFRMSKENTLPDKGYLLAFHPDLLFRTSLKNHIKNYTFF
ECCCCEEECCCCEEEEECCHHHEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCEEE
HYRKEEALHLSRRETEKVTCCLSNIEDELHHPIDTHSSIILSRHIELLLDYCTRYYERQF
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ITRENKNKALLENMERLFVEYIASGRLQGGKLPTSGYMAGELDLSVAYFDDLLKFETGKT
HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECEEEEHHHHHHHHHHHCCCCH
LEEYLQLKRLDIARHMLLQDGHTPAAVARKLGYPNVQCFSVLFKKITGVAPSDYRLSQN
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA