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The map label for this gene is yijO [C]

Identifier: 150005600

GI number: 150005600

Start: 3903991

End: 3904899

Strand: Direct

Name: yijO [C]

Synonym: BVU_3088

Alternate gene names: 150005600

Gene position: 3903991-3904899 (Clockwise)

Preceding gene: 150005591

Following gene: 150005601

Centisome position: 75.61

GC content: 44.99

Gene sequence:

>909_bases
ATGGATAAGATATTAAATTTAGACAGTGTGGACCAATATAACAGTCTATACGGACTTGAAACACTGAATCCGTTGGTCAG
TGTCATTGATTTGAACAAGGCTACCCGGCAGATGGACTATGTGCACTGGAACTATGGCGTTTATGCACTTTATCTGAAAT
TGGAGAAAGCTTGTGATATCAAATACGGGCGTCGGAGTTATGACTATCAGGAGGGAACCGTGGTATGTTTTGCTCCGGGA
CAAACAACGGAAACCACATTGACCACCGACCGTGTGCAGTTGAATGTGCTTGGCATTCTTTTTCATCCGGATTTGTTACG
GGGGACCACGCTTGGAAAAACAATAAAGAAATATACCTTCTTTTCGTATGAAGTGAGCGAGGCGCTGCACCTTTCGGAAG
ATGAGCGCAATATTATGACAGATTGCCTGAAGATTATCCGTATGGAACTGGAACGGGGGGTGGACAAGCACAGTAAGACC
TTGCTGGTAAACTATATAGAACTGCTTCTTAATTACTGTATGCGTTTTTATGAACGTCAGTTCGCCACCCGCAGTCATTC
GAACCGTGATGTGTTGACACGCTTTGAAGGGTTGCTTGACGATTATTTTGAGGGCGAACTTGCCGAGCGTGACGGATTAC
CTACCGTGAAATACTTTGCTGACAAACTGTGCCTTTCATCCAACTACTTCGGGGATATGTTCAAGAAGGAAACCGGCAAG
ACTCCACAGGAATATATTCAGGAAAAAGTGATAGAACTGGCAAAGGAACGGATGTCCGACAGGAGAGAAACCGTCAGCAG
GGTAGCCTATTCACTGGGATTTCAATATCCGCAGCATTTCTGCCGGTTGTTCAAGAAGCGTGTGGGCTGTACACCGAATG
AATATCGGGCACAAAACCTTCTTTTATAG

Upstream 100 bases:

>100_bases
AGGTTATAACCTTGTCCGGATAACTTCTTATTTTTGTGACCGGAATATTTCAAATAACTGAAAAAGCTGTATTTTAGCAG
ACATTAAACAAGTTAGAATG

Downstream 100 bases:

>100_bases
TATTCTGTCGTAACAAGCAATGCAAGAGACTATGTTGGACTTGAGGACTGTATATGAATGTAACCGCTGTCTGGGTTGCA
AGACATTGCATCCGCAGGTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcriptional Regulator; Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Family Protein; Two Component Transcriptional Regulator AraC Family; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcription Regulator; Bacterial Regulatory Helix-Turn-Helix Protein; Two Component Transcriptional Regulator Arac Family; Transcriptional Regulator AraC Type; Transcriptional Regulatory Protein; AraC-Family Transcriptional Regulator

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MDKILNLDSVDQYNSLYGLETLNPLVSVIDLNKATRQMDYVHWNYGVYALYLKLEKACDIKYGRRSYDYQEGTVVCFAPG
QTTETTLTTDRVQLNVLGILFHPDLLRGTTLGKTIKKYTFFSYEVSEALHLSEDERNIMTDCLKIIRMELERGVDKHSKT
LLVNYIELLLNYCMRFYERQFATRSHSNRDVLTRFEGLLDDYFEGELAERDGLPTVKYFADKLCLSSNYFGDMFKKETGK
TPQEYIQEKVIELAKERMSDRRETVSRVAYSLGFQYPQHFCRLFKKRVGCTPNEYRAQNLLL

Sequences:

>Translated_302_residues
MDKILNLDSVDQYNSLYGLETLNPLVSVIDLNKATRQMDYVHWNYGVYALYLKLEKACDIKYGRRSYDYQEGTVVCFAPG
QTTETTLTTDRVQLNVLGILFHPDLLRGTTLGKTIKKYTFFSYEVSEALHLSEDERNIMTDCLKIIRMELERGVDKHSKT
LLVNYIELLLNYCMRFYERQFATRSHSNRDVLTRFEGLLDDYFEGELAERDGLPTVKYFADKLCLSSNYFGDMFKKETGK
TPQEYIQEKVIELAKERMSDRRETVSRVAYSLGFQYPQHFCRLFKKRVGCTPNEYRAQNLLL
>Mature_302_residues
MDKILNLDSVDQYNSLYGLETLNPLVSVIDLNKATRQMDYVHWNYGVYALYLKLEKACDIKYGRRSYDYQEGTVVCFAPG
QTTETTLTTDRVQLNVLGILFHPDLLRGTTLGKTIKKYTFFSYEVSEALHLSEDERNIMTDCLKIIRMELERGVDKHSKT
LLVNYIELLLNYCMRFYERQFATRSHSNRDVLTRFEGLLDDYFEGELAERDGLPTVKYFADKLCLSSNYFGDMFKKETGK
TPQEYIQEKVIELAKERMSDRRETVSRVAYSLGFQYPQHFCRLFKKRVGCTPNEYRAQNLLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35395; Mature: 35395

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKILNLDSVDQYNSLYGLETLNPLVSVIDLNKATRQMDYVHWNYGVYALYLKLEKACDI
CCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEEEEHHHHHCC
KYGRRSYDYQEGTVVCFAPGQTTETTLTTDRVQLNVLGILFHPDLLRGTTLGKTIKKYTF
CCCCCCCCCCCCEEEEECCCCCCCCEEEECEEEEEEEEEEECCHHHHCCHHHHHHHHHHE
FSYEVSEALHLSEDERNIMTDCLKIIRMELERGVDKHSKTLLVNYIELLLNYCMRFYERQ
EHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FATRSHSNRDVLTRFEGLLDDYFEGELAERDGLPTVKYFADKLCLSSNYFGDMFKKETGK
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
TPQEYIQEKVIELAKERMSDRRETVSRVAYSLGFQYPQHFCRLFKKRVGCTPNEYRAQNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHC
LL
CC
>Mature Secondary Structure
MDKILNLDSVDQYNSLYGLETLNPLVSVIDLNKATRQMDYVHWNYGVYALYLKLEKACDI
CCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCEEEECCCEEEEEEEHHHHHCC
KYGRRSYDYQEGTVVCFAPGQTTETTLTTDRVQLNVLGILFHPDLLRGTTLGKTIKKYTF
CCCCCCCCCCCCEEEEECCCCCCCCEEEECEEEEEEEEEEECCHHHHCCHHHHHHHHHHE
FSYEVSEALHLSEDERNIMTDCLKIIRMELERGVDKHSKTLLVNYIELLLNYCMRFYERQ
EHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FATRSHSNRDVLTRFEGLLDDYFEGELAERDGLPTVKYFADKLCLSSNYFGDMFKKETGK
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
TPQEYIQEKVIELAKERMSDRRETVSRVAYSLGFQYPQHFCRLFKKRVGCTPNEYRAQNL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHC
LL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA