| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150004768
Identifier: 150004768
GI number: 150004768
Start: 2889310
End: 2890278
Strand: Direct
Name: 150004768
Synonym: BVU_2230
Alternate gene names: NA
Gene position: 2889310-2890278 (Clockwise)
Preceding gene: 150004767
Following gene: 150004769
Centisome position: 55.96
GC content: 37.05
Gene sequence:
>969_bases ATGAAAAAAAAAATGATTTTTATTTGGTTATTGATGTTGGGGACATTGACTTCTTGTCAGTCATGTTCCTCAGAATATAA GAATGTGAATGAAATAATTGTGGAAGAGCTGGAAATACCTGTTCCACTGGGTGACCCGTTTATATTGTTGCACAATGGGA CTTATTATGCTTATGGTACTCACTCGGATGAAGGAATAGAGGTTTATATCTCGGATAATTTAAAAACGTGGAAATATAAA GGGCTGGCTTTGAATAAGAAGGATTCATGGGCAGACCGTTGGTTTTGGGCACCGGAAGTATATGAAGTGAATGGTAAATT TTATATGTATTATTCGGCAGATGAGCATATTTGTGTAGCAGTGGCAGATTCCCCTGTAGGACCATTTATACAAAATAAGC AAGAACCTATGATTGTTGAGGAGAAATGTATTGATAATTCTTTTTTCATGGATGATGACGGTACTCCTTATTTGTCATTT GTCCGTTTTAATGATGGGAATAATGTATGGATAGCCGAGTTGGAAAAAGATTTGATAACCCTTAAGAAAGAAACGATGCG TCCTTGTATTCATGTTTCACAGGCTTGGGAGGAAGTGTGGCCTCGAGTCAATGAAGGTTCTTATATTCTCAAACACAATG GAATTTATTATATGACTTATTCTGCGAATAGTTATGAAAGTCCATTCTATGGTGTAGGTTGTGCTACAGCTACCGATATA ATGGGGGAATGGGCTAAATACGACGAAAATCCATTATTGCAAAATCCTGGTGGGTTGGTAGGTGTAGGGCATAGCGCCAT GTTCACTGATAAAGAGGGAAAACTTCGTATTGTATTCCATGCCCACAAAGATAAAAGTAATATTCATCCGCGTGCTATGT ATATTGGTACGGTAAATTTTGAGAATGTGAATGGAACAGACCGTATGAGAATCAGTAAAGAATATATAACTCCTAAATTA CTGCAATGA
Upstream 100 bases:
>100_bases ATATTCATTATCCTGCTTCTTGTGTAGGATTTTGTTCTGGAAATTATTCTCCGGTATATAAAGGAATATTGTATTATCAT ATAGGAAACTGACTAGTATT
Downstream 100 bases:
>100_bases GAAAAAATTTGATCCTGTCTATCTGCTTTTGTTTGGTGTCTTGCTCATCATCGTCTGCGCAAGAAGAAATATCTGATGGT GATAAAACCAGCTATTACTG
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Endo-1 4-Beta-Xylanase; Glycoside Hydrolase Family Protein; Beta-Xylosidase; Glycosyl Hydrolase Family; Glycoside Hydrolase; Endo-1 4-Beta-Xylanase D; Arabinan Endo-1 5-Alpha-L-Arabinosidase A; Arabinan Endo-1 5-Alpha-L-Arabinosidase; Family; Alpha-N-Arabinofuranosidase; Glycoside Hydrolase Family Beta-Glycosidase; Glycosyl Hydrolase; Xylosidase/Arabinofuranosidase; Endo-Arabinase; Methionine Biosynthesis MetW; Glycosy Hydrolase Family Protein; SecY Protein; Glycosyl Hydrolases; Beta-Xylosidase/Alpha-L-Arabinfuranosidase; Exported Endo-Arabinase; Beta-Fructosidase Superfamily Protein; Alpha-Arabinofuranosidase; Aldose 1-Epimerase; Hydrolase; Exported Glycosylhydrolase; LPXTG-Motif Cell Wall Anchor Domain Protein; F5/8 Type C Domain-Containing Protein; Glycosyl Hydrolases Family; Coagulation Factor 5/8 Type Domain Protein; Xylosidase; Alpha-L-Arabinfuranosidase
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKKKMIFIWLLMLGTLTSCQSCSSEYKNVNEIIVEELEIPVPLGDPFILLHNGTYYAYGTHSDEGIEVYISDNLKTWKYK GLALNKKDSWADRWFWAPEVYEVNGKFYMYYSADEHICVAVADSPVGPFIQNKQEPMIVEEKCIDNSFFMDDDGTPYLSF VRFNDGNNVWIAELEKDLITLKKETMRPCIHVSQAWEEVWPRVNEGSYILKHNGIYYMTYSANSYESPFYGVGCATATDI MGEWAKYDENPLLQNPGGLVGVGHSAMFTDKEGKLRIVFHAHKDKSNIHPRAMYIGTVNFENVNGTDRMRISKEYITPKL LQ
Sequences:
>Translated_322_residues MKKKMIFIWLLMLGTLTSCQSCSSEYKNVNEIIVEELEIPVPLGDPFILLHNGTYYAYGTHSDEGIEVYISDNLKTWKYK GLALNKKDSWADRWFWAPEVYEVNGKFYMYYSADEHICVAVADSPVGPFIQNKQEPMIVEEKCIDNSFFMDDDGTPYLSF VRFNDGNNVWIAELEKDLITLKKETMRPCIHVSQAWEEVWPRVNEGSYILKHNGIYYMTYSANSYESPFYGVGCATATDI MGEWAKYDENPLLQNPGGLVGVGHSAMFTDKEGKLRIVFHAHKDKSNIHPRAMYIGTVNFENVNGTDRMRISKEYITPKL LQ >Mature_322_residues MKKKMIFIWLLMLGTLTSCQSCSSEYKNVNEIIVEELEIPVPLGDPFILLHNGTYYAYGTHSDEGIEVYISDNLKTWKYK GLALNKKDSWADRWFWAPEVYEVNGKFYMYYSADEHICVAVADSPVGPFIQNKQEPMIVEEKCIDNSFFMDDDGTPYLSF VRFNDGNNVWIAELEKDLITLKKETMRPCIHVSQAWEEVWPRVNEGSYILKHNGIYYMTYSANSYESPFYGVGCATATDI MGEWAKYDENPLLQNPGGLVGVGHSAMFTDKEGKLRIVFHAHKDKSNIHPRAMYIGTVNFENVNGTDRMRISKEYITPKL LQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37041; Mature: 37041
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKMIFIWLLMLGTLTSCQSCSSEYKNVNEIIVEELEIPVPLGDPFILLHNGTYYAYGT CCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEC HSDEGIEVYISDNLKTWKYKGLALNKKDSWADRWFWAPEVYEVNGKFYMYYSADEHICVA CCCCCEEEEEECCCEEEEEECEEECCCCCCHHHEEECCEEEEECCEEEEEEECCCEEEEE VADSPVGPFIQNKQEPMIVEEKCIDNSFFMDDDGTPYLSFVRFNDGNNVWIAELEKDLIT EECCCCCHHHCCCCCCEEEHHHHCCCCEEECCCCCCEEEEEEECCCCEEEEEEECHHHHH LKKETMRPCIHVSQAWEEVWPRVNEGSYILKHNGIYYMTYSANSYESPFYGVGCATATDI HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCEEECCHHHHHHH MGEWAKYDENPLLQNPGGLVGVGHSAMFTDKEGKLRIVFHAHKDKSNIHPRAMYIGTVNF HHHHHHCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEEE ENVNGTDRMRISKEYITPKLLQ CCCCCCCCEEEEHHHCCHHHCC >Mature Secondary Structure MKKKMIFIWLLMLGTLTSCQSCSSEYKNVNEIIVEELEIPVPLGDPFILLHNGTYYAYGT CCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEC HSDEGIEVYISDNLKTWKYKGLALNKKDSWADRWFWAPEVYEVNGKFYMYYSADEHICVA CCCCCEEEEEECCCEEEEEECEEECCCCCCHHHEEECCEEEEECCEEEEEEECCCEEEEE VADSPVGPFIQNKQEPMIVEEKCIDNSFFMDDDGTPYLSFVRFNDGNNVWIAELEKDLIT EECCCCCHHHCCCCCCEEEHHHHCCCCEEECCCCCCEEEEEEECCCCEEEEEEECHHHHH LKKETMRPCIHVSQAWEEVWPRVNEGSYILKHNGIYYMTYSANSYESPFYGVGCATATDI HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEECCCCCCCEEECCHHHHHHH MGEWAKYDENPLLQNPGGLVGVGHSAMFTDKEGKLRIVFHAHKDKSNIHPRAMYIGTVNF HHHHHHCCCCCCCCCCCCEEEECCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEEE ENVNGTDRMRISKEYITPKLLQ CCCCCCCCEEEEHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA