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The map label for this gene is abnA [H]

Identifier: 150004769

GI number: 150004769

Start: 2890275

End: 2891276

Strand: Direct

Name: abnA [H]

Synonym: BVU_2231

Alternate gene names: 150004769

Gene position: 2890275-2891276 (Clockwise)

Preceding gene: 150004768

Following gene: 150004770

Centisome position: 55.98

GC content: 40.62

Gene sequence:

>1002_bases
ATGAGAAAAAATTTGATCCTGTCTATCTGCTTTTGTTTGGTGTCTTGCTCATCATCGTCTGCGCAAGAAGAAATATCTGA
TGGTGATAAAACCAGCTATTACTGGAATCCGGTGATAGATTATAGTCTGCCCGATCCTACTATTATAGAAGGTGGTGATG
GTTATTATTATTTGTATGCAACCGAAGATATTCGTAATTTGCCGATCCATCGTTCCAAGGATTTGATTAATTGGGAATGG
GTAGGTACAGCATTCACGGATCGAACGCGTCCTGATTTTGAACCGGGTGGAGGCTTATGGGCTCCGGATATCAATAAGAT
AGGTGATACGTATGTACTTTATTATTCTATGTCTAAATGGGGAGGTGAGTGGACCTGTGGTATCGGTTGCGCTACGGCAG
ACAAACTTTCGGGGCCATTTAAAGACCATGGTCTGATGTTTCGGAGTAACGAGATTAATGTACAGAATTCTATTGACCCT
TTCTATATAGAAGATGCCGGAAAGAAATTTTTGTTTTGGGGCAGCTTTCGGGGCATTTATGGCATTGAATTAAGTGAGGA
CGGTCTTTCAATAAAACAAGGGAAGAAGCCTCGGCAGGTGGCTGGTACAGCTTATGAAGGAACTTATATTCATAAAAAAG
AAGGTTTTTACTATTTTTTTGCTTCCATAGGGACTTGCTGTGAAGGATTGAATAGCACTTACACTACTGTAGTTGCTCGT
TCAGAAAATTTGTTTGGACCTTATGTTGATAAGAACGGGAGGACAATGATGGATAACCAACATGAAGTGTTGATTCATAA
GAATAGTTCGTTTGTGGGAACAGGACACAATTCGGAGATTGTGACTGATAAAGTGGGTAATGATTGGGTATTTTATCATG
CAGTGGCCACAAAGCATCCTGAAGGGCGTGTTTTGATGATGGATAAAATAAGTTGGAAAGACGGATGGCCTGTGGTAGCT
ACGGATTCTCCCTCATTGAAATCGGAAAAACCTGTATTGTAA

Upstream 100 bases:

>100_bases
ATCCGCGTGCTATGTATATTGGTACGGTAAATTTTGAGAATGTGAATGGAACAGACCGTATGAGAATCAGTAAAGAATAT
ATAACTCCTAAATTACTGCA

Downstream 100 bases:

>100_bases
TTAATAAATACATAAAAATATGAATTGGAAAAACTTTGTATGTAGTGTGGTGTGTCTGGCAGGAATGACTTGTGCGGAAG
CTGTGAACTATACACCGGAA

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Endo-1,5-alpha-L-arabinanase; ABN; Endo-arabinanase [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MRKNLILSICFCLVSCSSSSAQEEISDGDKTSYYWNPVIDYSLPDPTIIEGGDGYYYLYATEDIRNLPIHRSKDLINWEW
VGTAFTDRTRPDFEPGGGLWAPDINKIGDTYVLYYSMSKWGGEWTCGIGCATADKLSGPFKDHGLMFRSNEINVQNSIDP
FYIEDAGKKFLFWGSFRGIYGIELSEDGLSIKQGKKPRQVAGTAYEGTYIHKKEGFYYFFASIGTCCEGLNSTYTTVVAR
SENLFGPYVDKNGRTMMDNQHEVLIHKNSSFVGTGHNSEIVTDKVGNDWVFYHAVATKHPEGRVLMMDKISWKDGWPVVA
TDSPSLKSEKPVL

Sequences:

>Translated_333_residues
MRKNLILSICFCLVSCSSSSAQEEISDGDKTSYYWNPVIDYSLPDPTIIEGGDGYYYLYATEDIRNLPIHRSKDLINWEW
VGTAFTDRTRPDFEPGGGLWAPDINKIGDTYVLYYSMSKWGGEWTCGIGCATADKLSGPFKDHGLMFRSNEINVQNSIDP
FYIEDAGKKFLFWGSFRGIYGIELSEDGLSIKQGKKPRQVAGTAYEGTYIHKKEGFYYFFASIGTCCEGLNSTYTTVVAR
SENLFGPYVDKNGRTMMDNQHEVLIHKNSSFVGTGHNSEIVTDKVGNDWVFYHAVATKHPEGRVLMMDKISWKDGWPVVA
TDSPSLKSEKPVL
>Mature_333_residues
MRKNLILSICFCLVSCSSSSAQEEISDGDKTSYYWNPVIDYSLPDPTIIEGGDGYYYLYATEDIRNLPIHRSKDLINWEW
VGTAFTDRTRPDFEPGGGLWAPDINKIGDTYVLYYSMSKWGGEWTCGIGCATADKLSGPFKDHGLMFRSNEINVQNSIDP
FYIEDAGKKFLFWGSFRGIYGIELSEDGLSIKQGKKPRQVAGTAYEGTYIHKKEGFYYFFASIGTCCEGLNSTYTTVVAR
SENLFGPYVDKNGRTMMDNQHEVLIHKNSSFVGTGHNSEIVTDKVGNDWVFYHAVATKHPEGRVLMMDKISWKDGWPVVA
TDSPSLKSEKPVL

Specific function: Catalyzes the hydrolysis of the alpha-1,5-linked L- arabinofuranoside backbone. Its preferred substrate is linear 1,5- alpha-L-arabinan. It is also active towards branched sugar beet arabinan, but inactive towards larch wood arabinogalactan, wheat arabino

COG id: COG3507

COG function: function code G; Beta-xylosidase

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 43 family [H]

Homologues:

Organism=Escherichia coli, GI1786467, Length=321, Percent_Identity=25.8566978193146, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006710
- InterPro:   IPR016840 [H]

Pfam domain/function: PF04616 Glyco_hydro_43 [H]

EC number: =3.2.1.99 [H]

Molecular weight: Translated: 37460; Mature: 37460

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKNLILSICFCLVSCSSSSAQEEISDGDKTSYYWNPVIDYSLPDPTIIEGGDGYYYLYA
CCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCEEECCCCCCCEEECCCCEEEEEE
TEDIRNLPIHRSKDLINWEWVGTAFTDRTRPDFEPGGGLWAPDINKIGDTYVLYYSMSKW
ECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCC
GGEWTCGIGCATADKLSGPFKDHGLMFRSNEINVQNSIDPFYIEDAGKKFLFWGSFRGIY
CCCEEEEEECCCHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCEE
GIELSEDGLSIKQGKKPRQVAGTAYEGTYIHKKEGFYYFFASIGTCCEGLNSTYTTVVAR
EEEECCCCCCHHCCCCCHHHCCCEECCEEEEECCCEEEEEEHHHHHHHCCCCCEEEEEEE
SENLFGPYVDKNGRTMMDNQHEVLIHKNSSFVGTGHNSEIVTDKVGNDWVFYHAVATKHP
CCCCCCCEECCCCCEECCCCEEEEEECCCCEEECCCCCEEEEECCCCCEEEEEEEECCCC
EGRVLMMDKISWKDGWPVVATDSPSLKSEKPVL
CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRKNLILSICFCLVSCSSSSAQEEISDGDKTSYYWNPVIDYSLPDPTIIEGGDGYYYLYA
CCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEECCEEECCCCCCCEEECCCCEEEEEE
TEDIRNLPIHRSKDLINWEWVGTAFTDRTRPDFEPGGGLWAPDINKIGDTYVLYYSMSKW
ECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEECCC
GGEWTCGIGCATADKLSGPFKDHGLMFRSNEINVQNSIDPFYIEDAGKKFLFWGSFRGIY
CCCEEEEEECCCHHHCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCEE
GIELSEDGLSIKQGKKPRQVAGTAYEGTYIHKKEGFYYFFASIGTCCEGLNSTYTTVVAR
EEEECCCCCCHHCCCCCHHHCCCEECCEEEEECCCEEEEEEHHHHHHHCCCCCEEEEEEE
SENLFGPYVDKNGRTMMDNQHEVLIHKNSSFVGTGHNSEIVTDKVGNDWVFYHAVATKHP
CCCCCCCEECCCCCEECCCCEEEEEECCCCEEECCCCCEEEEECCCCCEEEEEEEECCCC
EGRVLMMDKISWKDGWPVVATDSPSLKSEKPVL
CCCEEEEEECCCCCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]