| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is metA
Identifier: 150004585
GI number: 150004585
Start: 2644423
End: 2645340
Strand: Direct
Name: metA
Synonym: BVU_2042
Alternate gene names: 150004585
Gene position: 2644423-2645340 (Clockwise)
Preceding gene: 150004582
Following gene: 150004586
Centisome position: 51.22
GC content: 40.63
Gene sequence:
>918_bases ATGCCGTTAAATTTACCCGATAAACTACCTGCTATTGAATTGCTGAAGGAGGAAAATATCTTCGTCATAGACAATTCACG TGCCAGTGCACAGGATATTCGTCCGTTAAAAATCGTGATATTGAATTTGATGCCGTTGAAGATAACGACAGAAACGGATT TGGTACGTTTGCTTTCCAACACTCCCTTGCAGTTGGAAATATCATTTATGAAGTTGAAAAGCCATACATCGAAAAATACG CCGGTAGAACATATGAAAGCATTCTATCATGACTTTGATTTGATGCGCGACGAGAAATATGACGGGATGATTATTACGGG AGCTCCGGTAGAGCAGATGCCGTATGAGGATGTGAATTATTGGGATGAGATTACTACTATTTTTGATTGGGCGCGTACTC ATGTTACCTCAACTCTTTATATTTGTTGGGCGGCCCAAGCCGGGCTTTATCATTTCTATGGAGTTCCCAAATATCCGCTG AAACAAAAAATGTTTGGTATTTTCCGTCATCATATCAATGTACAGGGATTGCCCATATTCCGTGGTTTTGATGATGAGTT TTTTGTACCACATAGCCGTCATACCGAAATACACCGTGAGGATATTCTGAAAGTAAAAGAGTTGGCTTTAATAGCTGAGT CTGATGAGTCTGGGGTTTATATGGCTATGGCTCGTAATGGGCGTGAATTCTTTATTACCGGGCATTCGGAGTATTCTCCT TATACGCTTGATACGGAATATAAGCGTGATTTGGCGAAAGGGTTGCCTATTGAAATGCCTGTAAATTATTATAAGGACGA TAATCCGGACAATGCCCCGGTGGTGCGTTGGCGCGGACATGCCAATTTGTTGTTTTCTAATTGGTTGAACTATTATGTAT ATCAGGAAACCCCGTTTGATATAAATCAGATACGATGA
Upstream 100 bases:
>100_bases ATCAGGGAAAGGAAATAATTTAGTTCAAAAGATCGTTTAATAAGGAGAATTGGCGGGATTTTTTTAATTTTGCACTTACA ACTAATTAACAGATAAGAAA
Downstream 100 bases:
>100_bases TCAGACAACGAAAAATAGAATTATTAGCTCCTGCTAAAAATCTGGAGTGCGGTATTGCAGCTGTTGATCACGGTGCTGAT GCCATTTATATTGGTGCTCC
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MPLNLPDKLPAIELLKEENIFVIDNSRASAQDIRPLKIVILNLMPLKITTETDLVRLLSNTPLQLEISFMKLKSHTSKNT PVEHMKAFYHDFDLMRDEKYDGMIITGAPVEQMPYEDVNYWDEITTIFDWARTHVTSTLYICWAAQAGLYHFYGVPKYPL KQKMFGIFRHHINVQGLPIFRGFDDEFFVPHSRHTEIHREDILKVKELALIAESDESGVYMAMARNGREFFITGHSEYSP YTLDTEYKRDLAKGLPIEMPVNYYKDDNPDNAPVVRWRGHANLLFSNWLNYYVYQETPFDINQIR
Sequences:
>Translated_305_residues MPLNLPDKLPAIELLKEENIFVIDNSRASAQDIRPLKIVILNLMPLKITTETDLVRLLSNTPLQLEISFMKLKSHTSKNT PVEHMKAFYHDFDLMRDEKYDGMIITGAPVEQMPYEDVNYWDEITTIFDWARTHVTSTLYICWAAQAGLYHFYGVPKYPL KQKMFGIFRHHINVQGLPIFRGFDDEFFVPHSRHTEIHREDILKVKELALIAESDESGVYMAMARNGREFFITGHSEYSP YTLDTEYKRDLAKGLPIEMPVNYYKDDNPDNAPVVRWRGHANLLFSNWLNYYVYQETPFDINQIR >Mature_304_residues PLNLPDKLPAIELLKEENIFVIDNSRASAQDIRPLKIVILNLMPLKITTETDLVRLLSNTPLQLEISFMKLKSHTSKNTP VEHMKAFYHDFDLMRDEKYDGMIITGAPVEQMPYEDVNYWDEITTIFDWARTHVTSTLYICWAAQAGLYHFYGVPKYPLK QKMFGIFRHHINVQGLPIFRGFDDEFFVPHSRHTEIHREDILKVKELALIAESDESGVYMAMARNGREFFITGHSEYSPY TLDTEYKRDLAKGLPIEMPVNYYKDDNPDNAPVVRWRGHANLLFSNWLNYYVYQETPFDINQIR
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family
Homologues:
Organism=Escherichia coli, GI1790443, Length=304, Percent_Identity=46.7105263157895, Blast_Score=320, Evalue=6e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): META_BACV8 (A6L1Z3)
Other databases:
- EMBL: CP000139 - RefSeq: YP_001299329.1 - ProteinModelPortal: A6L1Z3 - SMR: A6L1Z3 - STRING: A6L1Z3 - GeneID: 5303007 - GenomeReviews: CP000139_GR - KEGG: bvu:BVU_2042 - NMPDR: fig|435590.6.peg.1917 - eggNOG: COG1897 - HOGENOM: HBG362506 - OMA: QAGLYYH - ProtClustDB: PRK05368 - GO: GO:0005737 - HAMAP: MF_00295 - InterPro: IPR005697 - PANTHER: PTHR20919 - PIRSF: PIRSF000450 - ProDom: PD037892 - TIGRFAMs: TIGR01001
Pfam domain/function: PF04204 HTS
EC number: =2.3.1.46
Molecular weight: Translated: 35759; Mature: 35628
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: ACT_SITE 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLNLPDKLPAIELLKEENIFVIDNSRASAQDIRPLKIVILNLMPLKITTETDLVRLLSN CCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEEECHHHHHHHHCC TPLQLEISFMKLKSHTSKNTPVEHMKAFYHDFDLMRDEKYDGMIITGAPVEQMPYEDVNY CCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCH WDEITTIFDWARTHVTSTLYICWAAQAGLYHFYGVPKYPLKQKMFGIFRHHINVQGLPIF HHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE RGFDDEFFVPHSRHTEIHREDILKVKELALIAESDESGVYMAMARNGREFFITGHSEYSP ECCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCEEEEECCCCCCC YTLDTEYKRDLAKGLPIEMPVNYYKDDNPDNAPVVRWRGHANLLFSNWLNYYVYQETPFD EEECHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEEECCCCC INQIR HHCCC >Mature Secondary Structure PLNLPDKLPAIELLKEENIFVIDNSRASAQDIRPLKIVILNLMPLKITTETDLVRLLSN CCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEEEEEEEEECHHHHHHHHCC TPLQLEISFMKLKSHTSKNTPVEHMKAFYHDFDLMRDEKYDGMIITGAPVEQMPYEDVNY CCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCH WDEITTIFDWARTHVTSTLYICWAAQAGLYHFYGVPKYPLKQKMFGIFRHHINVQGLPIF HHHHHHHHHHHHHHHHEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEEE RGFDDEFFVPHSRHTEIHREDILKVKELALIAESDESGVYMAMARNGREFFITGHSEYSP ECCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCEEEEECCCCCCC YTLDTEYKRDLAKGLPIEMPVNYYKDDNPDNAPVVRWRGHANLLFSNWLNYYVYQETPFD EEECHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEECCCCCEEEECCCEEEEEECCCCC INQIR HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA