Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

Click here to switch to the map view.

The map label for this gene is 150004357

Identifier: 150004357

GI number: 150004357

Start: 2329437

End: 2330984

Strand: Direct

Name: 150004357

Synonym: BVU_1803

Alternate gene names: NA

Gene position: 2329437-2330984 (Clockwise)

Preceding gene: 150004356

Following gene: 150004358

Centisome position: 45.12

GC content: 40.89

Gene sequence:

>1548_bases
ATGGTTACATTAAAATCGTTTTTAGGTATGATTGCCGCAGTTCCTTTTATAATGGCGTGTAATCAGACAGGGCAGGTCAA
TGCAACACTTTTTCCTGCTTCCGGTTCGGAAAATGTCAATCCGGACACTCATTTGGTTCTTACTTTTTCCGAAACTCCTG
TCCTTGGAGATTCCGGTATGATACGGGTTTATGACGCAGTTACTGACCAAGTGGTGGACAGTTTGGATTTGAGTATTCCG
TCTGGTCCTACGGAGAGCCGTACGTATGGTCCGGAATGTGATTATACAAAAGTGCCTTATGACTATACTCGTACCGTTAT
GCCTACCAATAAAGATACTCGTCCGGGTACTCCTTCGGGAACGGCGGAACCTACTCCTCCTGTGTACCAGCTTACTATTA
TAGGGGGATTTACGGATGCCTTTCATTTTTATCCCGTCATCGTGCGTGATTCTATAGCTACTATTTATCTACACAATAAT
ATGCTGGAATATGGGCATACTTACTATGTGACTATAGATAATGGTGTGTTAAATTTAGCTGATGGCAGTTTTCAAGGAGT
CACTAAAGAAGATGAGTGGATTTTCACTACTAAATCTGACATGCCGGAACTTTCAGATACATTGATTGTGGATGTTGCAG
GAAAAGGAGACTTTAATACAGTTCAGGGAGCCTTGGATTTTATTCCTGATTTTAATGAACAACAGACTGTGATTTTAGTT
AATCCCGGTGATTATGAAGAATTGGTCTATACAAGAAATAAATGGAATGTTAAAATTAAAGGAGCAGGAATGACCGATAC
TAAAGTACATTATGCAAATAATGAAGTCTTTAATCCTCATCCGCTGACTGTGAAAACCAATGAGTGGCCCGGTACATTTC
CTTCCCGTCGGGCGGCTTTCATGCTTGATAATTGCAAGGATATAGTCATTGAGGATATGACCATTGCTACAGATTTAAAA
GGTCAGGCAGAAGGGTTGTTGATTAATGGAGAAAGGATTGCTTTATACCGTGTACATATTATAGGTTCAGGAGATGCATT
GCAGGCGAATGGAACAATCTATATGGAATCTTGTGAGTTGGATGGTGGTGGTGATACTATTTTAGGACGTGGCAGCTTGT
TTGCTTATAAAAGTAATTTCCGTAATGGTGGCGGCCCTTTCTCATGGGTAAGAAATACGGCGGGCAATCATGGTAATGTG
TTTGTTGAATGCACTTTTTCTACGGAGGATGGTAAACAGGCGGATTACGGACGTACTAAAAGTAACCACGGTTCGGCCTA
TCCTGATGCAGAGTTTGTCTTGATAGATTGTAAAGTGAAAAATATAATTCCTGAAGGCTGGAGTTCTATTGGAGCGAAGA
CTGCTAAAATGTACGAGTATAATACTTGTGATATGGTGACAGGAAATCCGGTTGATGTATCCAAACGTCATCCATATTCC
CGCCAGCTGACAAAAGATAAAGATACAGAGCTGATTAACAATTATCGGAACCCTGCTTTTGTTTTGAAAGGCTGGGTGCC
GGATAGTTGTATAAATGGGACGAAGTAA

Upstream 100 bases:

>100_bases
AGCATACGGGCAGTTGTGGTGAAAGTACAACGATGCTGCATTATATGAAGGTGGAATGGGAATAGAATGATTAAGACTTG
AATTTAATACTGATGAATCT

Downstream 100 bases:

>100_bases
TAATTAGTGGAGATAAGTTTGCGCATCGAATATTGAGGTATCTAATTAAATATCGGAAACAGATATGGATGATCTATTAA
AGTTGGAAACAGAAACTTTT

Product: carbohydrate esterase family 8 protein

Products: NA

Alternate protein names: Carbohydrate Esterase Family 8 Protein; Pectin Methylesterase Pme8A; Alpha/Beta Superfamily Hydrolase; Pectin Methylesterase-Like

Number of amino acids: Translated: 515; Mature: 515

Protein sequence:

>515_residues
MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGMIRVYDAVTDQVVDSLDLSIP
SGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSGTAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNN
MLEYGHTYYVTIDNGVLNLADGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV
NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAFMLDNCKDIVIEDMTIATDLK
GQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCELDGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNV
FVECTFSTEDGKQADYGRTKSNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS
RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK

Sequences:

>Translated_515_residues
MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGMIRVYDAVTDQVVDSLDLSIP
SGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSGTAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNN
MLEYGHTYYVTIDNGVLNLADGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV
NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAFMLDNCKDIVIEDMTIATDLK
GQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCELDGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNV
FVECTFSTEDGKQADYGRTKSNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS
RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK
>Mature_515_residues
MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGMIRVYDAVTDQVVDSLDLSIP
SGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSGTAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNN
MLEYGHTYYVTIDNGVLNLADGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV
NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAFMLDNCKDIVIEDMTIATDLK
GQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCELDGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNV
FVECTFSTEDGKQADYGRTKSNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS
RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56681; Mature: 56681

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGM
CEEHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEECCCCE
IRVYDAVTDQVVDSLDLSIPSGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSG
EEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCC
TAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNNMLEYGHTYYVTIDNGVLNLA
CCCCCCCEEEEEEEECCCCCHHEEEEEEECCEEEEEEECCEECCCCEEEEEECCCEEEEC
DGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV
CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEE
NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAF
CCCCCHHEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEE
MLDNCKDIVIEDMTIATDLKGQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCEL
EECCCCEEEEECEEEEECCCCCCCEEEEECCEEEEEEEEEEECCCEEEECCEEEEEEEEC
DGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNVFVECTFSTEDGKQADYGRTK
CCCCCEEEECCEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC
SNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS
CCCCCCCCCCEEEEEEEEEECCCCCCHHHHCCCEEEEEEECCCCEECCCCCCCCCCCCCH
RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK
HCCCCCCCHHHHHCCCCCEEEEECCCCCHHCCCCC
>Mature Secondary Structure
MVTLKSFLGMIAAVPFIMACNQTGQVNATLFPASGSENVNPDTHLVLTFSETPVLGDSGM
CEEHHHHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCEECCCCE
IRVYDAVTDQVVDSLDLSIPSGPTESRTYGPECDYTKVPYDYTRTVMPTNKDTRPGTPSG
EEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCC
TAEPTPPVYQLTIIGGFTDAFHFYPVIVRDSIATIYLHNNMLEYGHTYYVTIDNGVLNLA
CCCCCCCEEEEEEEECCCCCHHEEEEEEECCEEEEEEECCEECCCCEEEEEECCCEEEEC
DGSFQGVTKEDEWIFTTKSDMPELSDTLIVDVAGKGDFNTVQGALDFIPDFNEQQTVILV
CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEE
NPGDYEELVYTRNKWNVKIKGAGMTDTKVHYANNEVFNPHPLTVKTNEWPGTFPSRRAAF
CCCCCHHEEEECCCEEEEEEECCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEE
MLDNCKDIVIEDMTIATDLKGQAEGLLINGERIALYRVHIIGSGDALQANGTIYMESCEL
EECCCCEEEEECEEEEECCCCCCCEEEEECCEEEEEEEEEEECCCEEEECCEEEEEEEEC
DGGGDTILGRGSLFAYKSNFRNGGGPFSWVRNTAGNHGNVFVECTFSTEDGKQADYGRTK
CCCCCEEEECCEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC
SNHGSAYPDAEFVLIDCKVKNIIPEGWSSIGAKTAKMYEYNTCDMVTGNPVDVSKRHPYS
CCCCCCCCCCEEEEEEEEEECCCCCCHHHHCCCEEEEEEECCCCEECCCCCCCCCCCCCH
RQLTKDKDTELINNYRNPAFVLKGWVPDSCINGTK
HCCCCCCCHHHHHCCCCCEEEEECCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA