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The map label for this gene is yebA [H]

Identifier: 150004209

GI number: 150004209

Start: 2131986

End: 2132843

Strand: Direct

Name: yebA [H]

Synonym: BVU_1650

Alternate gene names: 150004209

Gene position: 2131986-2132843 (Clockwise)

Preceding gene: 150004208

Following gene: 150004210

Centisome position: 41.29

GC content: 41.26

Gene sequence:

>858_bases
ATGAAGAAAAAAGGAAGGAAAGCATTTTGGCATAATTTCAAGTTTAAGTATAAACTGACCATTACCAATGAAAATACGTT
GGAGGAGATTGTGGGACTGCACGTTTCCAAACTCAATGGTGTGTCTGTATTGCTGTCTGCCGTAACGGTAATTTTCCTGA
TTTCGGCAACTATCATTGTTTTTACTCCTTTACGTAACTATTTGCCGGGATATATGAACAGTGAGGTACGTGCGCAGGTG
GTGACCAATGCCTTGCGGGCCGATTCATTACAACAAGTGGTGACGAGGCAGAATATGTATATCATGAACATTCAGGATAT
ATTTAGCGGGAAAGTAAAAGCTGATACAGTCCAATCTATCGACTCTCTGACCATTCTTCGTTCTGATTCTTTGATGGAAC
GTACCAGGCAGGAAGAAGAGTTTCGCAAGCAATATGAAGAATCGGAACGATATAATCTGACGGCTGTTGATGATAATAAT
GCCGCTTCCGGATTGATATTCTATCGTCCTACACGGGGCATGATGTCATCTAATTTTGACTTGGAGAACAGGCATTACGG
TGTGGACATTGCCGCTAATCCAAATGAAAGTGTGTTGGCAACATTGGATGGGACAGTGATTTTGTCTACTTATACGGCAG
AAACCGGTTATGTTATTCAGATACAGCATGGACAGGATTTTGTGTCGGTGTATAAACATTGTGGTTCGTTATTAAAGAAA
GAAGGAGATCCGGTGAAAGGTGGTGAAGCTATTGCATTGGTAGGAAATACCGGTGAAAAAACTACCGGACCGCATCTGCA
TTTCGAATTATGGCATAAGGGACGTGCGATTGATCCCTCAAAATACATTGTATTTTAA

Upstream 100 bases:

>100_bases
GCCTGCCCACGAGGAATTTATCACCAAATTGGATAAGAAAAAGCGTTTGCTGACGGTCGAAGTACCTGATGGCTTGATAT
AAATATAGAAGGTGCGCACG

Downstream 100 bases:

>100_bases
CAACATTATGAAAAAACAAATAGCGATATTAGGTTCTACCGGCTCTATCGGTACACAAGCTTTACAGGTAATAGAGGAAC
ATCCAGATTTATATGAGGTC

Product: putative membrane peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKKKGRKAFWHNFKFKYKLTITNENTLEEIVGLHVSKLNGVSVLLSAVTVIFLISATIIVFTPLRNYLPGYMNSEVRAQV
VTNALRADSLQQVVTRQNMYIMNIQDIFSGKVKADTVQSIDSLTILRSDSLMERTRQEEEFRKQYEESERYNLTAVDDNN
AASGLIFYRPTRGMMSSNFDLENRHYGVDIAANPNESVLATLDGTVILSTYTAETGYVIQIQHGQDFVSVYKHCGSLLKK
EGDPVKGGEAIALVGNTGEKTTGPHLHFELWHKGRAIDPSKYIVF

Sequences:

>Translated_285_residues
MKKKGRKAFWHNFKFKYKLTITNENTLEEIVGLHVSKLNGVSVLLSAVTVIFLISATIIVFTPLRNYLPGYMNSEVRAQV
VTNALRADSLQQVVTRQNMYIMNIQDIFSGKVKADTVQSIDSLTILRSDSLMERTRQEEEFRKQYEESERYNLTAVDDNN
AASGLIFYRPTRGMMSSNFDLENRHYGVDIAANPNESVLATLDGTVILSTYTAETGYVIQIQHGQDFVSVYKHCGSLLKK
EGDPVKGGEAIALVGNTGEKTTGPHLHFELWHKGRAIDPSKYIVF
>Mature_285_residues
MKKKGRKAFWHNFKFKYKLTITNENTLEEIVGLHVSKLNGVSVLLSAVTVIFLISATIIVFTPLRNYLPGYMNSEVRAQV
VTNALRADSLQQVVTRQNMYIMNIQDIFSGKVKADTVQSIDSLTILRSDSLMERTRQEEEFRKQYEESERYNLTAVDDNN
AASGLIFYRPTRGMMSSNFDLENRHYGVDIAANPNESVLATLDGTVILSTYTAETGYVIQIQHGQDFVSVYKHCGSLLKK
EGDPVKGGEAIALVGNTGEKTTGPHLHFELWHKGRAIDPSKYIVF

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=180, Percent_Identity=32.7777777777778, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789099, Length=117, Percent_Identity=36.7521367521368, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87082297, Length=158, Percent_Identity=32.2784810126582, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 32092; Mature: 32092

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKGRKAFWHNFKFKYKLTITNENTLEEIVGLHVSKLNGVSVLLSAVTVIFLISATIIV
CCCCCCCHHHCCEEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHE
FTPLRNYLPGYMNSEVRAQVVTNALRADSLQQVVTRQNMYIMNIQDIFSGKVKADTVQSI
EECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCCCHHHHHHH
DSLTILRSDSLMERTRQEEEFRKQYEESERYNLTAVDDNNAASGLIFYRPTRGMMSSNFD
HHEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCC
LENRHYGVDIAANPNESVLATLDGTVILSTYTAETGYVIQIQHGQDFVSVYKHCGSLLKK
CCCCEEEEEEECCCCCCEEEEECCEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHC
EGDPVKGGEAIALVGNTGEKTTGPHLHFELWHKGRAIDPSKYIVF
CCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEC
>Mature Secondary Structure
MKKKGRKAFWHNFKFKYKLTITNENTLEEIVGLHVSKLNGVSVLLSAVTVIFLISATIIV
CCCCCCCHHHCCEEEEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHE
FTPLRNYLPGYMNSEVRAQVVTNALRADSLQQVVTRQNMYIMNIQDIFSGKVKADTVQSI
EECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHCCCCCHHHHHHH
DSLTILRSDSLMERTRQEEEFRKQYEESERYNLTAVDDNNAASGLIFYRPTRGMMSSNFD
HHEEEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCC
LENRHYGVDIAANPNESVLATLDGTVILSTYTAETGYVIQIQHGQDFVSVYKHCGSLLKK
CCCCEEEEEEECCCCCCEEEEECCEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHC
EGDPVKGGEAIALVGNTGEKTTGPHLHFELWHKGRAIDPSKYIVF
CCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]