| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is thrS [H]
Identifier: 150003988
GI number: 150003988
Start: 1900121
End: 1901785
Strand: Reverse
Name: thrS [H]
Synonym: BVU_1422
Alternate gene names: 150003988
Gene position: 1901785-1900121 (Counterclockwise)
Preceding gene: 150003991
Following gene: 150003987
Centisome position: 36.83
GC content: 40.9
Gene sequence:
>1665_bases ATGTTACAAATCTGTTGCAAAAATAACAATATTTCAAAGAACTTCCCAATCGGAAGCTCACTTTTGGATATTTATAATGG TTTTAATCTAGATATCCCATACGGACCGGTCAGTGCCAAAGTCAATAACAAAGTAGAAGGACTCAATTACCGGGCCTATA ATAATAAGGATGTAGAGTTCCTGAACATACTGAATCCTTCAGGAATGCGTACCTATGTCCGTTCTCTCTGCTTCATCTTG TGCAAAGCGGTGGAGGACTTATACCCTGATGGAAAAATCATGCTTGAACATCCCGTATCTAAAGGATATTATTGCGCCTT GCAGATAGGACGCGAAACCGGGCTGGATGATGTTTCCCGTATTAAGCAGCGAATGAAAGAGATTGTGGAAGCCAACATCC CTTTCCACCGTTTTGAATGTCACACAACTGAAGTAGTAGAACTATTCCGCCGGAAAGGAATGATGGACAAAGTTAGACTG CTTGAAACTTCAGGGGAACTTTACTCCTATTATTATACTTTAGAAGATACCATTGACTACTACTATGGCAGTCTGTTGCC CAGCACCGGATATATCCGCAAATTCGACATTGTTAAATACTATGACGGCTTGTTGCTGCGAGTCCCCAACCGTCAGAATC CGGAAATATTGGAGGAAGTAGTAAAACAAGAAAAAATGCTGGAAGTATTCAAAGAGCACCGACGCTGGAATCAGATTTTA GGTGTGGGTACTGTAGGAGATTTCAATGTGGCCTGTAATGAAGGTTATGCCACCGATCTGATTAATGTGTCTGAAGCCTT GCAGGAAAAAAAAATTTCCAATATTGCTGATGAGATATACCACAGAGGAAAAAACGGTCAAAGAGTAAAACTGGTTCTTA TCTCCGGTCCATCCTCTTCTGGTAAAACGACTTTCAGCAAACGACTCAGTATCCAGTTGATGGCAAACGGGCTGAAACCT TACCCCATCTCCCTGGACAATTACTTTGTTGACCGAGAAAAGACACCAAAAGATGAAAAAGGTGATTATGATTACGAATC ATTGTATGCATTGGATTTGGAGTTCTTCAACAAGCAATTACAAGATCTGCTTCATGGAAAGGAAGTAGAGTTACCACGTT TCAACTTCACCACAGGAAGAAGGGAATTTAAAGGTGACAAACTTAAGATTGACGATAACATGATATTGATTCTCGAAGGG ATTCATGCACTTAACCCCGAATTAACCCCTCATATTCCCGCCGAGAATAAATATAAAATATATGTATCGGCATTAACCAC TATTCTGCTGGACAATCATAATTATATTCCGACTACCGACAACCGTTTGTTGCGCCGTATTATCCGCGATTACAAATACC GTGGCTATTCCGCAGAGGAAACAATCAGAAGATGGCCCAGCGTACGCGCCGGAGAAGAAAAATGGATCTTCCCATATCAG GAAAATGCAGATGCCATGTTCAATTCTGCCCTGTTGTTTGAACTGGCCATTATGAAGGATTATGCCATTCCTATTCTAAG GAATGTTCCCAATAACAAACCGGAATATTCAGAAGCATACCGTTTACGCAAATTCTTGGAATATTTCGCTTCGGTACAAG ATAAAGAATTGCCTCCCACTTCTTTACTGAGAGAGTTTTTAGGAGGAAGCAGTTTCCGGTATTAA
Upstream 100 bases:
>100_bases AATACTCCATCTTTAATTAATTTGGTAGGAATTGGCTAATCTCCCTTTTATTCAGTAAATTTCAAGCCGTTTCACTACAT TAGTAATAATTATTACGATT
Downstream 100 bases:
>100_bases CCTGTTATTAAACAGTATATAAGTTTTGTTTATGTGCAAAACAAACAGTAATTTCGGCCATTATTAAACAAGTATAAGTG AATGCACTCCAAAGGCTATA
Product: uridine kinase
Products: NA
Alternate protein names: Threonine--tRNA ligase; ThrRS [H]
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MLQICCKNNNISKNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNILNPSGMRTYVRSLCFIL CKAVEDLYPDGKIMLEHPVSKGYYCALQIGRETGLDDVSRIKQRMKEIVEANIPFHRFECHTTEVVELFRRKGMMDKVRL LETSGELYSYYYTLEDTIDYYYGSLLPSTGYIRKFDIVKYYDGLLLRVPNRQNPEILEEVVKQEKMLEVFKEHRRWNQIL GVGTVGDFNVACNEGYATDLINVSEALQEKKISNIADEIYHRGKNGQRVKLVLISGPSSSGKTTFSKRLSIQLMANGLKP YPISLDNYFVDREKTPKDEKGDYDYESLYALDLEFFNKQLQDLLHGKEVELPRFNFTTGRREFKGDKLKIDDNMILILEG IHALNPELTPHIPAENKYKIYVSALTTILLDNHNYIPTTDNRLLRRIIRDYKYRGYSAEETIRRWPSVRAGEEKWIFPYQ ENADAMFNSALLFELAIMKDYAIPILRNVPNNKPEYSEAYRLRKFLEYFASVQDKELPPTSLLREFLGGSSFRY
Sequences:
>Translated_554_residues MLQICCKNNNISKNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNILNPSGMRTYVRSLCFIL CKAVEDLYPDGKIMLEHPVSKGYYCALQIGRETGLDDVSRIKQRMKEIVEANIPFHRFECHTTEVVELFRRKGMMDKVRL LETSGELYSYYYTLEDTIDYYYGSLLPSTGYIRKFDIVKYYDGLLLRVPNRQNPEILEEVVKQEKMLEVFKEHRRWNQIL GVGTVGDFNVACNEGYATDLINVSEALQEKKISNIADEIYHRGKNGQRVKLVLISGPSSSGKTTFSKRLSIQLMANGLKP YPISLDNYFVDREKTPKDEKGDYDYESLYALDLEFFNKQLQDLLHGKEVELPRFNFTTGRREFKGDKLKIDDNMILILEG IHALNPELTPHIPAENKYKIYVSALTTILLDNHNYIPTTDNRLLRRIIRDYKYRGYSAEETIRRWPSVRAGEEKWIFPYQ ENADAMFNSALLFELAIMKDYAIPILRNVPNNKPEYSEAYRLRKFLEYFASVQDKELPPTSLLREFLGGSSFRY >Mature_554_residues MLQICCKNNNISKNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEFLNILNPSGMRTYVRSLCFIL CKAVEDLYPDGKIMLEHPVSKGYYCALQIGRETGLDDVSRIKQRMKEIVEANIPFHRFECHTTEVVELFRRKGMMDKVRL LETSGELYSYYYTLEDTIDYYYGSLLPSTGYIRKFDIVKYYDGLLLRVPNRQNPEILEEVVKQEKMLEVFKEHRRWNQIL GVGTVGDFNVACNEGYATDLINVSEALQEKKISNIADEIYHRGKNGQRVKLVLISGPSSSGKTTFSKRLSIQLMANGLKP YPISLDNYFVDREKTPKDEKGDYDYESLYALDLEFFNKQLQDLLHGKEVELPRFNFTTGRREFKGDKLKIDDNMILILEG IHALNPELTPHIPAENKYKIYVSALTTILLDNHNYIPTTDNRLLRRIIRDYKYRGYSAEETIRRWPSVRAGEEKWIFPYQ ENADAMFNSALLFELAIMKDYAIPILRNVPNNKPEYSEAYRLRKFLEYFASVQDKELPPTSLLREFLGGSSFRY
Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]
COG id: COG0572
COG function: function code F; Uridine kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]
Homologues:
None
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002314 - InterPro: IPR006195 - InterPro: IPR004154 - InterPro: IPR012675 - InterPro: IPR004095 - InterPro: IPR012676 - InterPro: IPR002320 - InterPro: IPR018163 - InterPro: IPR012947 [H]
Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]
EC number: =6.1.1.3 [H]
Molecular weight: Translated: 64376; Mature: 64376
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQICCKNNNISKNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEF CEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEE LNILNPSGMRTYVRSLCFILCKAVEDLYPDGKIMLEHPVSKGYYCALQIGRETGLDDVSR EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHH IKQRMKEIVEANIPFHRFECHTTEVVELFRRKGMMDKVRLLETSGELYSYYYTLEDTIDY HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEHHHHHHH YYGSLLPSTGYIRKFDIVKYYDGLLLRVPNRQNPEILEEVVKQEKMLEVFKEHRRWNQIL HHHHHCCCCCCEEEEHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHE GVGTVGDFNVACNEGYATDLINVSEALQEKKISNIADEIYHRGKNGQRVKLVLISGPSSS EECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC GKTTFSKRLSIQLMANGLKPYPISLDNYFVDREKTPKDEKGDYDYESLYALDLEFFNKQL CCCHHHHHEEEEEEECCCCCCEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QDLLHGKEVELPRFNFTTGRREFKGDKLKIDDNMILILEGIHALNPELTPHIPAENKYKI HHHHCCCCCCCCCCCCCCCCHHCCCCEEEECCCEEEEEECHHHCCCCCCCCCCCCCCEEE YVSALTTILLDNHNYIPTTDNRLLRRIIRDYKYRGYSAEETIRRWPSVRAGEEKWIFPYQ EHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEECCCC ENADAMFNSALLFELAIMKDYAIPILRNVPNNKPEYSEAYRLRKFLEYFASVQDKELPPT CCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH SLLREFLGGSSFRY HHHHHHHCCCCCCC >Mature Secondary Structure MLQICCKNNNISKNFPIGSSLLDIYNGFNLDIPYGPVSAKVNNKVEGLNYRAYNNKDVEF CEEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEE LNILNPSGMRTYVRSLCFILCKAVEDLYPDGKIMLEHPVSKGYYCALQIGRETGLDDVSR EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCCHHHHH IKQRMKEIVEANIPFHRFECHTTEVVELFRRKGMMDKVRLLETSGELYSYYYTLEDTIDY HHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEEHHHHHHH YYGSLLPSTGYIRKFDIVKYYDGLLLRVPNRQNPEILEEVVKQEKMLEVFKEHRRWNQIL HHHHHCCCCCCEEEEHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHE GVGTVGDFNVACNEGYATDLINVSEALQEKKISNIADEIYHRGKNGQRVKLVLISGPSSS EECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC GKTTFSKRLSIQLMANGLKPYPISLDNYFVDREKTPKDEKGDYDYESLYALDLEFFNKQL CCCHHHHHEEEEEEECCCCCCEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QDLLHGKEVELPRFNFTTGRREFKGDKLKIDDNMILILEGIHALNPELTPHIPAENKYKI HHHHCCCCCCCCCCCCCCCCHHCCCCEEEECCCEEEEEECHHHCCCCCCCCCCCCCCEEE YVSALTTILLDNHNYIPTTDNRLLRRIIRDYKYRGYSAEETIRRWPSVRAGEEKWIFPYQ EHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEECCCC ENADAMFNSALLFELAIMKDYAIPILRNVPNNKPEYSEAYRLRKFLEYFASVQDKELPPT CCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHH SLLREFLGGSSFRY HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA