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The map label for this gene is xerC [H]

Identifier: 150003856

GI number: 150003856

Start: 1735775

End: 1736893

Strand: Reverse

Name: xerC [H]

Synonym: BVU_1288

Alternate gene names: 150003856

Gene position: 1736893-1735775 (Counterclockwise)

Preceding gene: 150003861

Following gene: 150003855

Centisome position: 33.64

GC content: 39.05

Gene sequence:

>1119_bases
ATGGGAATTACATTAGGAAAGAAACAATTGAACAAAGGAAGAGTTTCGCTTTATTTGAATTACAGTTATAACGGGAAACG
CCGCAAAGAGTATTTGGGCATCATCCTGGACGCTCCTACCAGTGCAGAGCGAAGAGCGGAAAACAGAAACAAGGTACTAA
TTGCCAGGCAGATAAAAGCAAAGAAGGAACTAGAATTCTTATCTGTTGAATATCATCTGAACGATATAGAAAATACATTC
GATGATATACTTCCAACAGATAAAAGCAATGTTCCCGATTTCTATATTCTGATAGGACAATACCTGGATACCTATCACAA
AAAAGACAAGAAAATGGTCAGGGCATGTATCACCCATCTGCGACTGTTTACAAGAAAGAAAAGCTTACCTATAACCCTTC
TCACAAAAGATTTTTGTATAAATTTTCTTGAGTATCTCAGGGATCATCTCCGAGGTAACACTCCCATCGGATATTTCAAG
AAATTCAAAATGTGCATCAATAAATGTATAGAAAAAAAGTTAATGACCTCTAACCCTACAGATGGTATCCGCCTGATGCA
GTTTGATGAGGTAACCAAAGCAATCCTCAGCTTAAAAGAGATTCAGAAACTTGCTATCACTCCATGCCCCAACAACGAAG
TAAAAAGGGCATTCTTGTTCTCTTGCTATTGCGGGCTGCGCTGGTGTGATGTGCACCAACTGCAATATAAAGACATAGAT
TTCTCATCAAACCGCCTTACTATTCTACAACAGAAAGTACAGTCACACTCCAAAAACGCAATCTTGCATCTAAACTTAAA
CCACACTGCCATCAAGCTCCTGCAAAGACATAAAGGCATTAACGAGGAGTTGGTATTCGGGCTCCCCTCCTATTCTTACA
CACTAAGAATTTTAAACAAATGGGTCAAAAGGGCTAATATACACAAGCACATCACCTTCCACTGTGCCCGGCACTCATTT
ATCACCAACATTATGGCAAATGGAGCTAATATCAAGACCGCCGCCAGCCTTGCAGGACATTCTACTACCCGGCACACTGA
AAAATATGTTCATATCATAGATGAACTCAAACAAAAAGCAGTAGATAGTTTACCGGATATTATTGTCAATTATAAATAA

Upstream 100 bases:

>100_bases
AAAGATATTATTATTATAGAAAGAAAGATGGAGGAATTCATTTTCAGTCCCTCTCTGGTCCTTCTTTTCAACATTATTAT
TGTATTAATTATTATTCATT

Downstream 100 bases:

>100_bases
AAAAGGACCTGAAACGGCCCTTGCATCATTAAAGTTGTCACACATATAACTGGTGTTCAAACAATTAGTATTACTGTATA
GTATCCGGCACGAATACGAC

Product: putative integrase, tyrosine type site-specific recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MGITLGKKQLNKGRVSLYLNYSYNGKRRKEYLGIILDAPTSAERRAENRNKVLIARQIKAKKELEFLSVEYHLNDIENTF
DDILPTDKSNVPDFYILIGQYLDTYHKKDKKMVRACITHLRLFTRKKSLPITLLTKDFCINFLEYLRDHLRGNTPIGYFK
KFKMCINKCIEKKLMTSNPTDGIRLMQFDEVTKAILSLKEIQKLAITPCPNNEVKRAFLFSCYCGLRWCDVHQLQYKDID
FSSNRLTILQQKVQSHSKNAILHLNLNHTAIKLLQRHKGINEELVFGLPSYSYTLRILNKWVKRANIHKHITFHCARHSF
ITNIMANGANIKTAASLAGHSTTRHTEKYVHIIDELKQKAVDSLPDIIVNYK

Sequences:

>Translated_372_residues
MGITLGKKQLNKGRVSLYLNYSYNGKRRKEYLGIILDAPTSAERRAENRNKVLIARQIKAKKELEFLSVEYHLNDIENTF
DDILPTDKSNVPDFYILIGQYLDTYHKKDKKMVRACITHLRLFTRKKSLPITLLTKDFCINFLEYLRDHLRGNTPIGYFK
KFKMCINKCIEKKLMTSNPTDGIRLMQFDEVTKAILSLKEIQKLAITPCPNNEVKRAFLFSCYCGLRWCDVHQLQYKDID
FSSNRLTILQQKVQSHSKNAILHLNLNHTAIKLLQRHKGINEELVFGLPSYSYTLRILNKWVKRANIHKHITFHCARHSF
ITNIMANGANIKTAASLAGHSTTRHTEKYVHIIDELKQKAVDSLPDIIVNYK
>Mature_371_residues
GITLGKKQLNKGRVSLYLNYSYNGKRRKEYLGIILDAPTSAERRAENRNKVLIARQIKAKKELEFLSVEYHLNDIENTFD
DILPTDKSNVPDFYILIGQYLDTYHKKDKKMVRACITHLRLFTRKKSLPITLLTKDFCINFLEYLRDHLRGNTPIGYFKK
FKMCINKCIEKKLMTSNPTDGIRLMQFDEVTKAILSLKEIQKLAITPCPNNEVKRAFLFSCYCGLRWCDVHQLQYKDIDF
SSNRLTILQQKVQSHSKNAILHLNLNHTAIKLLQRHKGINEELVFGLPSYSYTLRILNKWVKRANIHKHITFHCARHSFI
TNIMANGANIKTAASLAGHSTTRHTEKYVHIIDELKQKAVDSLPDIIVNYK

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 43255; Mature: 43124

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGITLGKKQLNKGRVSLYLNYSYNGKRRKEYLGIILDAPTSAERRAENRNKVLIARQIKA
CCCCCCHHHCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHCCCCEEEEEEHHHH
KKELEFLSVEYHLNDIENTFDDILPTDKSNVPDFYILIGQYLDTYHKKDKKMVRACITHL
HHHHHEEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLFTRKKSLPITLLTKDFCINFLEYLRDHLRGNTPIGYFKKFKMCINKCIEKKLMTSNPT
HHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
DGIRLMQFDEVTKAILSLKEIQKLAITPCPNNEVKRAFLFSCYCGLRWCDVHQLQYKDID
CCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECHHHCEEECCC
FSSNRLTILQQKVQSHSKNAILHLNLNHTAIKLLQRHKGINEELVFGLPSYSYTLRILNK
CCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHH
WVKRANIHKHITFHCARHSFITNIMANGANIKTAASLAGHSTTRHTEKYVHIIDELKQKA
HHHHCCCHHHHEEHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VDSLPDIIVNYK
HHCCCHHHCCCC
>Mature Secondary Structure 
GITLGKKQLNKGRVSLYLNYSYNGKRRKEYLGIILDAPTSAERRAENRNKVLIARQIKA
CCCCCHHHCCCCEEEEEEEECCCCCCCCEEEEEEEECCCCHHHHHCCCCEEEEEEHHHH
KKELEFLSVEYHLNDIENTFDDILPTDKSNVPDFYILIGQYLDTYHKKDKKMVRACITHL
HHHHHEEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLFTRKKSLPITLLTKDFCINFLEYLRDHLRGNTPIGYFKKFKMCINKCIEKKLMTSNPT
HHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
DGIRLMQFDEVTKAILSLKEIQKLAITPCPNNEVKRAFLFSCYCGLRWCDVHQLQYKDID
CCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCEEECHHHCEEECCC
FSSNRLTILQQKVQSHSKNAILHLNLNHTAIKLLQRHKGINEELVFGLPSYSYTLRILNK
CCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHH
WVKRANIHKHITFHCARHSFITNIMANGANIKTAASLAGHSTTRHTEKYVHIIDELKQKA
HHHHCCCHHHHEEHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VDSLPDIIVNYK
HHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA