Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is cshA [H]

Identifier: 150003861

GI number: 150003861

Start: 1743316

End: 1745190

Strand: Reverse

Name: cshA [H]

Synonym: BVU_1293

Alternate gene names: 150003861

Gene position: 1745190-1743316 (Counterclockwise)

Preceding gene: 150003862

Following gene: 150003856

Centisome position: 33.8

GC content: 42.45

Gene sequence:

>1875_bases
ATGAAGACATTTGAAGAGTTAGGCGTTTCCCCGGAAATACTAAAAGCGATTAAAGAAATGGGATATGAGAATCCCATGCC
GGTACAAGAAGAAGTAATACCGTATTTATTGGGAAACGGCAACGATGTAGTAGCCCTAGCACAAACAGGGACTGGAAAAA
CAGCCGCATTTGGTCTGCCGCTTATCCAAAAAGTTGACGTAAAACACCGTGCACCTCAAGCACTAATTTTATGCCCCACA
CGCGAATTGTGCTTGCAGATTGCAGGCGATCTGAACGATTACTCCAAGTACATTGACGGGCTGAAAATCCTTCCCGTATA
TGGTGGTTCATCCATCGAAAGCCAAATACGCATGTTGAAAACAGGCGTACATATTATTGTGGCTACTCCCGGACGACTGA
TTGATCTAATAGAAAGAAAGGTTGCCAAACTAGAAACAATTACAGATGTAGTAATGGACGAAGCCGATGAAATGCTGAAT
ATGGGATTTACTGATAGCATAAATGCTATCCTTGAAAAAGTTCCTGAAGATCGGAATACCTTGATGTTCTCGGCTACCAT
GAGTCCGGAAATCTCACGCATCGCCAAAAAATATCTGCATGACGCAAAAGAAATCACTATCGGTACCAAAAATGAGGGCA
GTAAAAACGTCAATCACATAGCCTATTTAGTACACGCTAAAGACAAATATGCCGCATTGAAACGTATCGCGGATTATTAT
CCACAGATTTATGGCATCATTTTCTGTCGTACCCGTAAAGAAACTCAGGAAATTGCAGATAAATTAATACAAGACGGTTA
TAACGCAGACTCTTTGCACGGTGAGCTCTCACAAGCCCAGCGCGACTTAGTGATGCAAAAATTCCGCCAACGCCATTTAC
AGCTTTTAGTTGCTACCGACGTAGCAGCCCGTGGCCTAGATGTAAATGACCTTACTCATGTCATTAATTATGGCTTGCCC
GATGATATAGAAAGCTATACTCATCGTAGTGGTCGTACAGGACGTGCCGGAAAAACAGGTATTTCTATTGCCATCATCAA
CCTGCGCGAAAAAGGCAAGATGCGTGAGATAGAACGAATCATCAACAAAAAATTTATCATGGGTGAGATGCCCAGTGGTA
AACAAATTTGCGAGCAGCAATTGATTAAATTGATAGATGACATAGAAAAGGTAAAAGTAAACGATGAAGAAATTGAATCC
TTCCTACCCGGAATCTATCGTAAACTGGAATGGCTTTCAAAGGAAGATCTGATAAAGCGCGTGGTGTCAATGGAATTTAA
CCGCTTCTTGGAATACTATAGTAACGCTCCGGAAATAGAAATTCCCAGCACAAATGACCGTCGCAGCGAACGTGGCTCCA
AAGAACGCAAGGATCATGGCAGTGCTCGTGAAAAGACAGAGCGTAAAGCAGAAAAAGGATACACCCGTCTATTCCTGAAT
GTAGGAAAGACAGACGGTTTCTATGCCAACCAAATCATAGAACTGATTAACCGCAACATGAAGAAGCAACGTACTACCAT
CGGACGAATAGACCTGATGCAGAATTTCTCTTTCTTCGAAGTAGCAGAAAATCAGGCACAGGACGTGATTAAAGCATTGA
ACAAGGTTAATCTGAATGGCGGCCGGAAAATTGTAGTAGAAGTTGCCGGTGACAATAATGGCAAAAACGACAATGGCGAA
CGCAGAAGCAGTGCAGCAAGGAATGCTTCATTCGGCAAAAAAAGTGACAGGTCCAATAAAAAAACGACCTCAAAAGAAGG
AAGACCCAGCCGTGCGGAACGTGGCTACATTGAAGAACGCGGTCCCAAAACGAAAGACGACTGGAAACAATTCTTTAACA
GCGATAACAATAAGAAAAAGAAATCCAAGAAATGA

Upstream 100 bases:

>100_bases
TCCCTAAAAATACACTACTGATAAAAACAAATATTGCATAAGCACCATATAATCCCATGATTATCCGTATCTTTGCAGCG
AATTAGATATTTGAAAATAA

Downstream 100 bases:

>100_bases
GGAAGCCAACTTCATGAAAGAGAATTGAGCATAGTAGAAATATGCAAATAACATCCACTTCTCTCGAATAATAGCGGAGC
AGGCAGAATTGAAACAACCT

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 624; Mature: 624

Protein sequence:

>624_residues
MKTFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLPLIQKVDVKHRAPQALILCPT
RELCLQIAGDLNDYSKYIDGLKILPVYGGSSIESQIRMLKTGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLN
MGFTDSINAILEKVPEDRNTLMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAALKRIADYY
PQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRHLQLLVATDVAARGLDVNDLTHVINYGLP
DDIESYTHRSGRTGRAGKTGISIAIINLREKGKMREIERIINKKFIMGEMPSGKQICEQQLIKLIDDIEKVKVNDEEIES
FLPGIYRKLEWLSKEDLIKRVVSMEFNRFLEYYSNAPEIEIPSTNDRRSERGSKERKDHGSAREKTERKAEKGYTRLFLN
VGKTDGFYANQIIELINRNMKKQRTTIGRIDLMQNFSFFEVAENQAQDVIKALNKVNLNGGRKIVVEVAGDNNGKNDNGE
RRSSAARNASFGKKSDRSNKKTTSKEGRPSRAERGYIEERGPKTKDDWKQFFNSDNNKKKKSKK

Sequences:

>Translated_624_residues
MKTFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLPLIQKVDVKHRAPQALILCPT
RELCLQIAGDLNDYSKYIDGLKILPVYGGSSIESQIRMLKTGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLN
MGFTDSINAILEKVPEDRNTLMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAALKRIADYY
PQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRHLQLLVATDVAARGLDVNDLTHVINYGLP
DDIESYTHRSGRTGRAGKTGISIAIINLREKGKMREIERIINKKFIMGEMPSGKQICEQQLIKLIDDIEKVKVNDEEIES
FLPGIYRKLEWLSKEDLIKRVVSMEFNRFLEYYSNAPEIEIPSTNDRRSERGSKERKDHGSAREKTERKAEKGYTRLFLN
VGKTDGFYANQIIELINRNMKKQRTTIGRIDLMQNFSFFEVAENQAQDVIKALNKVNLNGGRKIVVEVAGDNNGKNDNGE
RRSSAARNASFGKKSDRSNKKTTSKEGRPSRAERGYIEERGPKTKDDWKQFFNSDNNKKKKSKK
>Mature_624_residues
MKTFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLPLIQKVDVKHRAPQALILCPT
RELCLQIAGDLNDYSKYIDGLKILPVYGGSSIESQIRMLKTGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLN
MGFTDSINAILEKVPEDRNTLMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAALKRIADYY
PQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRHLQLLVATDVAARGLDVNDLTHVINYGLP
DDIESYTHRSGRTGRAGKTGISIAIINLREKGKMREIERIINKKFIMGEMPSGKQICEQQLIKLIDDIEKVKVNDEEIES
FLPGIYRKLEWLSKEDLIKRVVSMEFNRFLEYYSNAPEIEIPSTNDRRSERGSKERKDHGSAREKTERKAEKGYTRLFLN
VGKTDGFYANQIIELINRNMKKQRTTIGRIDLMQNFSFFEVAENQAQDVIKALNKVNLNGGRKIVVEVAGDNNGKNDNGE
RRSSAARNASFGKKSDRSNKKTTSKEGRPSRAERGYIEERGPKTKDDWKQFFNSDNNKKKKSKK

Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=37.1830985915493, Blast_Score=254, Evalue=2e-67,
Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=37.1830985915493, Blast_Score=254, Evalue=2e-67,
Organism=Homo sapiens, GI50659095, Length=413, Percent_Identity=36.8038740920097, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI41327771, Length=398, Percent_Identity=35.929648241206, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI13129006, Length=424, Percent_Identity=34.1981132075472, Blast_Score=247, Evalue=2e-65,
Organism=Homo sapiens, GI41327773, Length=359, Percent_Identity=38.7186629526462, Blast_Score=247, Evalue=3e-65,
Organism=Homo sapiens, GI222352149, Length=354, Percent_Identity=38.4180790960452, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=36.8279569892473, Blast_Score=237, Evalue=3e-62,
Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=36.8279569892473, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=36.8279569892473, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=37.2972972972973, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=37.2972972972973, Blast_Score=236, Evalue=4e-62,
Organism=Homo sapiens, GI164664518, Length=355, Percent_Identity=34.3661971830986, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=33.5135135135135, Blast_Score=234, Evalue=3e-61,
Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=36.1643835616438, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI21071032, Length=363, Percent_Identity=36.0881542699724, Blast_Score=228, Evalue=1e-59,
Organism=Homo sapiens, GI4758138, Length=384, Percent_Identity=36.1979166666667, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI148613856, Length=388, Percent_Identity=34.7938144329897, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI38201710, Length=388, Percent_Identity=34.7938144329897, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI55749865, Length=365, Percent_Identity=36.4383561643836, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI224593278, Length=398, Percent_Identity=33.6683417085427, Blast_Score=217, Evalue=3e-56,
Organism=Homo sapiens, GI216548263, Length=362, Percent_Identity=36.4640883977901, Blast_Score=215, Evalue=1e-55,
Organism=Homo sapiens, GI13518015, Length=362, Percent_Identity=36.4640883977901, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI262231852, Length=362, Percent_Identity=36.4640883977901, Blast_Score=214, Evalue=2e-55,
Organism=Homo sapiens, GI262118318, Length=362, Percent_Identity=36.4640883977901, Blast_Score=214, Evalue=3e-55,
Organism=Homo sapiens, GI188035877, Length=349, Percent_Identity=35.8166189111748, Blast_Score=213, Evalue=6e-55,
Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=32.620320855615, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=32.4396782841823, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI51094101, Length=348, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI164419743, Length=348, Percent_Identity=33.3333333333333, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI8922886, Length=378, Percent_Identity=33.5978835978836, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI6005743, Length=378, Percent_Identity=33.3333333333333, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=31.7142857142857, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI164419732, Length=372, Percent_Identity=34.9462365591398, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=34.4736842105263, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=32.2857142857143, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=32.2857142857143, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI41327776, Length=365, Percent_Identity=32.0547945205479, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI62241022, Length=358, Percent_Identity=33.2402234636872, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI41327779, Length=391, Percent_Identity=31.7135549872123, Blast_Score=179, Evalue=9e-45,
Organism=Homo sapiens, GI256223453, Length=385, Percent_Identity=29.8701298701299, Blast_Score=172, Evalue=1e-42,
Organism=Homo sapiens, GI62241024, Length=336, Percent_Identity=33.3333333333333, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI13514831, Length=406, Percent_Identity=29.064039408867, Blast_Score=166, Evalue=9e-41,
Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=29.6296296296296, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=29.6296296296296, Blast_Score=164, Evalue=3e-40,
Organism=Homo sapiens, GI38327634, Length=369, Percent_Identity=31.7073170731707, Blast_Score=155, Evalue=1e-37,
Organism=Homo sapiens, GI17505907, Length=410, Percent_Identity=28.5365853658537, Blast_Score=146, Evalue=7e-35,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=28.9940828402367, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI9506931, Length=538, Percent_Identity=23.2342007434944, Blast_Score=144, Evalue=3e-34,
Organism=Homo sapiens, GI256773275, Length=372, Percent_Identity=27.6881720430108, Blast_Score=130, Evalue=4e-30,
Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=26.7156862745098, Blast_Score=127, Evalue=4e-29,
Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=29.9065420560748, Blast_Score=121, Evalue=2e-27,
Organism=Homo sapiens, GI20336298, Length=228, Percent_Identity=32.8947368421053, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI4557365, Length=369, Percent_Identity=26.8292682926829, Blast_Score=90, Evalue=5e-18,
Organism=Escherichia coli, GI87082221, Length=388, Percent_Identity=40.7216494845361, Blast_Score=326, Evalue=2e-90,
Organism=Escherichia coli, GI1787016, Length=369, Percent_Identity=42.5474254742547, Blast_Score=300, Evalue=3e-82,
Organism=Escherichia coli, GI1787605, Length=408, Percent_Identity=37.7450980392157, Blast_Score=263, Evalue=2e-71,
Organism=Escherichia coli, GI1790214, Length=351, Percent_Identity=35.8974358974359, Blast_Score=218, Evalue=8e-58,
Organism=Escherichia coli, GI1788930, Length=375, Percent_Identity=33.0666666666667, Blast_Score=185, Evalue=7e-48,
Organism=Escherichia coli, GI48994977, Length=388, Percent_Identity=22.9381443298969, Blast_Score=69, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=37.5328083989501, Blast_Score=255, Evalue=6e-68,
Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=34.2245989304813, Blast_Score=245, Evalue=4e-65,
Organism=Caenorhabditis elegans, GI17555296, Length=365, Percent_Identity=37.2602739726027, Blast_Score=243, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=35.4330708661417, Blast_Score=240, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI71995724, Length=372, Percent_Identity=34.6774193548387, Blast_Score=238, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17507121, Length=372, Percent_Identity=34.4086021505376, Blast_Score=238, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17510309, Length=382, Percent_Identity=37.9581151832461, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17510307, Length=382, Percent_Identity=37.9581151832461, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI86570094, Length=364, Percent_Identity=36.2637362637363, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI71995514, Length=382, Percent_Identity=37.9581151832461, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI71995718, Length=384, Percent_Identity=36.71875, Blast_Score=230, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI17552114, Length=356, Percent_Identity=33.7078651685393, Blast_Score=229, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17510559, Length=404, Percent_Identity=32.6732673267327, Blast_Score=224, Evalue=8e-59,
Organism=Caenorhabditis elegans, GI115533224, Length=351, Percent_Identity=34.7578347578348, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI115532548, Length=378, Percent_Identity=35.7142857142857, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=35.7142857142857, Blast_Score=219, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=34.1880341880342, Blast_Score=216, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=33.2369942196532, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI71999644, Length=348, Percent_Identity=33.6206896551724, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17507945, Length=361, Percent_Identity=35.4570637119114, Blast_Score=206, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17536099, Length=378, Percent_Identity=32.2751322751323, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17536101, Length=378, Percent_Identity=32.2751322751323, Blast_Score=192, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17536103, Length=378, Percent_Identity=32.2751322751323, Blast_Score=191, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71982858, Length=347, Percent_Identity=30.2593659942363, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=34.7593582887701, Blast_Score=182, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI17507881, Length=375, Percent_Identity=32.8, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17507877, Length=375, Percent_Identity=33.6, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17509811, Length=360, Percent_Identity=30.5555555555556, Blast_Score=175, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=31.5926892950392, Blast_Score=166, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17507641, Length=382, Percent_Identity=29.8429319371728, Blast_Score=161, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17505370, Length=382, Percent_Identity=32.4607329842932, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17556951, Length=365, Percent_Identity=30.1369863013699, Blast_Score=155, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI193206561, Length=347, Percent_Identity=27.9538904899135, Blast_Score=155, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI71990816, Length=380, Percent_Identity=31.3157894736842, Blast_Score=148, Evalue=8e-36,
Organism=Caenorhabditis elegans, GI17508543, Length=381, Percent_Identity=27.8215223097113, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI32564046, Length=372, Percent_Identity=29.0322580645161, Blast_Score=146, Evalue=4e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=415, Percent_Identity=25.7831325301205, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17553716, Length=362, Percent_Identity=24.8618784530387, Blast_Score=139, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=33.6585365853659, Blast_Score=131, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI25148291, Length=368, Percent_Identity=26.6304347826087, Blast_Score=131, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI71997889, Length=373, Percent_Identity=27.3458445040214, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=37.2727272727273, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI25145561, Length=342, Percent_Identity=22.8070175438596, Blast_Score=72, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324217, Length=361, Percent_Identity=37.9501385041551, Blast_Score=247, Evalue=3e-66,
Organism=Saccharomyces cerevisiae, GI6324778, Length=370, Percent_Identity=37.027027027027, Blast_Score=246, Evalue=8e-66,
Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=34.5744680851064, Blast_Score=246, Evalue=9e-66,
Organism=Saccharomyces cerevisiae, GI6325138, Length=370, Percent_Identity=37.2972972972973, Blast_Score=243, Evalue=6e-65,
Organism=Saccharomyces cerevisiae, GI6320041, Length=357, Percent_Identity=36.4145658263305, Blast_Score=231, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6321856, Length=367, Percent_Identity=35.4223433242507, Blast_Score=223, Evalue=5e-59,
Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=36.6666666666667, Blast_Score=218, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6320449, Length=391, Percent_Identity=34.2710997442455, Blast_Score=215, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6322912, Length=370, Percent_Identity=33.2432432432432, Blast_Score=209, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6322323, Length=370, Percent_Identity=33.2432432432432, Blast_Score=209, Evalue=8e-55,
Organism=Saccharomyces cerevisiae, GI6323021, Length=355, Percent_Identity=34.9295774647887, Blast_Score=206, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6324620, Length=361, Percent_Identity=34.6260387811634, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6320119, Length=352, Percent_Identity=31.5340909090909, Blast_Score=191, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6319714, Length=374, Percent_Identity=30.4812834224599, Blast_Score=189, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=32.3684210526316, Blast_Score=186, Evalue=8e-48,
Organism=Saccharomyces cerevisiae, GI6320400, Length=387, Percent_Identity=33.0749354005168, Blast_Score=174, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=374, Percent_Identity=32.620320855615, Blast_Score=169, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6322427, Length=370, Percent_Identity=31.6216216216216, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6323947, Length=373, Percent_Identity=32.7077747989276, Blast_Score=165, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6319618, Length=432, Percent_Identity=27.5462962962963, Blast_Score=162, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6321267, Length=346, Percent_Identity=31.2138728323699, Blast_Score=155, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6320173, Length=234, Percent_Identity=33.7606837606838, Blast_Score=141, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=27.7251184834123, Blast_Score=136, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6322876, Length=235, Percent_Identity=29.7872340425532, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6321374, Length=465, Percent_Identity=22.5806451612903, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=38.2022471910112, Blast_Score=250, Evalue=2e-66,
Organism=Drosophila melanogaster, GI21355075, Length=371, Percent_Identity=37.466307277628, Blast_Score=248, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=37.1508379888268, Blast_Score=246, Evalue=4e-65,
Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=36.4829396325459, Blast_Score=244, Evalue=2e-64,
Organism=Drosophila melanogaster, GI18857967, Length=387, Percent_Identity=36.4341085271318, Blast_Score=238, Evalue=7e-63,
Organism=Drosophila melanogaster, GI28574962, Length=389, Percent_Identity=36.5038560411311, Blast_Score=238, Evalue=8e-63,
Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=35.9249329758713, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24584399, Length=345, Percent_Identity=37.3913043478261, Blast_Score=229, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24645031, Length=378, Percent_Identity=33.3333333333333, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI24583281, Length=356, Percent_Identity=34.2696629213483, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24583279, Length=356, Percent_Identity=34.2696629213483, Blast_Score=227, Evalue=2e-59,
Organism=Drosophila melanogaster, GI28575014, Length=424, Percent_Identity=32.311320754717, Blast_Score=224, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24582080, Length=373, Percent_Identity=33.5120643431635, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24582078, Length=373, Percent_Identity=33.5120643431635, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI17136248, Length=373, Percent_Identity=33.5120643431635, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24582075, Length=373, Percent_Identity=33.5120643431635, Blast_Score=222, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24585582, Length=366, Percent_Identity=34.6994535519126, Blast_Score=222, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24644479, Length=361, Percent_Identity=35.7340720221607, Blast_Score=219, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24644483, Length=361, Percent_Identity=35.7340720221607, Blast_Score=219, Evalue=6e-57,
Organism=Drosophila melanogaster, GI281361218, Length=361, Percent_Identity=35.7340720221607, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644481, Length=361, Percent_Identity=35.7340720221607, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644487, Length=361, Percent_Identity=35.7340720221607, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI45551833, Length=361, Percent_Identity=35.7340720221607, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI24644485, Length=361, Percent_Identity=35.7340720221607, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI17977678, Length=361, Percent_Identity=34.0720221606648, Blast_Score=218, Evalue=1e-56,
Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=36.5079365079365, Blast_Score=196, Evalue=5e-50,
Organism=Drosophila melanogaster, GI21356161, Length=368, Percent_Identity=32.6086956521739, Blast_Score=195, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24581954, Length=348, Percent_Identity=31.0344827586207, Blast_Score=188, Evalue=9e-48,
Organism=Drosophila melanogaster, GI24581952, Length=348, Percent_Identity=31.0344827586207, Blast_Score=188, Evalue=9e-48,
Organism=Drosophila melanogaster, GI24581956, Length=348, Percent_Identity=31.0344827586207, Blast_Score=188, Evalue=9e-48,
Organism=Drosophila melanogaster, GI17136814, Length=396, Percent_Identity=32.5757575757576, Blast_Score=184, Evalue=2e-46,
Organism=Drosophila melanogaster, GI21355559, Length=362, Percent_Identity=31.767955801105, Blast_Score=169, Evalue=7e-42,
Organism=Drosophila melanogaster, GI28571808, Length=376, Percent_Identity=30.8510638297872, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI28571809, Length=376, Percent_Identity=30.8510638297872, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=29.4444444444444, Blast_Score=159, Evalue=8e-39,
Organism=Drosophila melanogaster, GI17647335, Length=381, Percent_Identity=26.7716535433071, Blast_Score=155, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24642822, Length=381, Percent_Identity=29.9212598425197, Blast_Score=148, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=28.1345565749235, Blast_Score=142, Evalue=5e-34,
Organism=Drosophila melanogaster, GI24643725, Length=434, Percent_Identity=26.9585253456221, Blast_Score=139, Evalue=8e-33,
Organism=Drosophila melanogaster, GI20130173, Length=308, Percent_Identity=29.8701298701299, Blast_Score=136, Evalue=5e-32,
Organism=Drosophila melanogaster, GI19920478, Length=398, Percent_Identity=27.8894472361809, Blast_Score=132, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=26.1494252873563, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI18859659, Length=212, Percent_Identity=29.2452830188679, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28571338, Length=212, Percent_Identity=29.2452830188679, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24646066, Length=361, Percent_Identity=26.8698060941828, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17136666, Length=196, Percent_Identity=29.0816326530612, Blast_Score=73, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 70713; Mature: 70713

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MKTFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLP
CCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCC
LIQKVDVKHRAPQALILCPTRELCLQIAGDLNDYSKYIDGLKILPVYGGSSIESQIRMLK
HHHHHCHHHCCCCEEEECCCHHHHHHHHCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHH
TGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLNMGFTDSINAILEKVPEDRNT
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCE
LMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAALKRIADYY
EEEEECCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHH
PQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRHLQLLVATD
HHHHHHEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAARGLDVNDLTHVINYGLPDDIESYTHRSGRTGRAGKTGISIAIINLREKGKMREIERI
HHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH
INKKFIMGEMPSGKQICEQQLIKLIDDIEKVKVNDEEIESFLPGIYRKLEWLSKEDLIKR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
VVSMEFNRFLEYYSNAPEIEIPSTNDRRSERGSKERKDHGSAREKTERKAEKGYTRLFLN
HHHHHHHHHHHHHCCCCCEECCCCCCHHHHCCCHHHHHCCCHHHHHHHHHHCCCEEEEEE
VGKTDGFYANQIIELINRNMKKQRTTIGRIDLMQNFSFFEVAENQAQDVIKALNKVNLNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
GRKIVVEVAGDNNGKNDNGERRSSAARNASFGKKSDRSNKKTTSKEGRPSRAERGYIEER
CCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHC
GPKTKDDWKQFFNSDNNKKKKSKK
CCCCHHHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure
MKTFEELGVSPEILKAIKEMGYENPMPVQEEVIPYLLGNGNDVVALAQTGTGKTAAFGLP
CCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCC
LIQKVDVKHRAPQALILCPTRELCLQIAGDLNDYSKYIDGLKILPVYGGSSIESQIRMLK
HHHHHCHHHCCCCEEEECCCHHHHHHHHCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHH
TGVHIIVATPGRLIDLIERKVAKLETITDVVMDEADEMLNMGFTDSINAILEKVPEDRNT
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCE
LMFSATMSPEISRIAKKYLHDAKEITIGTKNEGSKNVNHIAYLVHAKDKYAALKRIADYY
EEEEECCCHHHHHHHHHHHCCHHHEEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHH
PQIYGIIFCRTRKETQEIADKLIQDGYNADSLHGELSQAQRDLVMQKFRQRHLQLLVATD
HHHHHHEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAARGLDVNDLTHVINYGLPDDIESYTHRSGRTGRAGKTGISIAIINLREKGKMREIERI
HHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHH
INKKFIMGEMPSGKQICEQQLIKLIDDIEKVKVNDEEIESFLPGIYRKLEWLSKEDLIKR
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
VVSMEFNRFLEYYSNAPEIEIPSTNDRRSERGSKERKDHGSAREKTERKAEKGYTRLFLN
HHHHHHHHHHHHHCCCCCEECCCCCCHHHHCCCHHHHHCCCHHHHHHHHHHCCCEEEEEE
VGKTDGFYANQIIELINRNMKKQRTTIGRIDLMQNFSFFEVAENQAQDVIKALNKVNLNG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
GRKIVVEVAGDNNGKNDNGERRSSAARNASFGKKSDRSNKKTTSKEGRPSRAERGYIEER
CCEEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHC
GPKTKDDWKQFFNSDNNKKKKSKK
CCCCHHHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA