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The map label for this gene is trmE [C]

Identifier: 148828173

GI number: 148828173

Start: 1598641

End: 1600197

Strand: Direct

Name: trmE [C]

Synonym: CGSHiGG_08625

Alternate gene names: 148828173

Gene position: 1598641-1600197 (Clockwise)

Preceding gene: 148828172

Following gene: 148828174

Centisome position: 84.71

GC content: 31.47

Gene sequence:

>1557_bases
ATGTTCGGGAAAAAAATAATTCATTCCAAAACAATATGGTTTTATTTTTTATTGTTTCTCTTTTCCATATTTACCAATAT
GGGATTAGGCAATGTATTAAGTGAGAATATTCCCGTTTCAGATTACGCAATTTTATTTGCTATCACGGCGATTTCTTTTT
ATTTTACCCCTTGGGTTGGGCGAATATTAATTACTGTATTATTTCTCAGTGCGCTATTTTATTGCTCTGCTGGTTTTTTC
TATGGTATTCCATCTTTGGGGATTATCGCTTCTGTTTATGAAACGAATATTAATGAAACCTTAGAATATTACACAACCAT
TCCTTTTTGGATATTTTTATTTCAAGTTAGTTATATCATTTTATTTGTTGCTTTAATGAAATTAAGTTTTTATGTTAAAC
AACAAGCATTTAAATGGCTAAATATGGCTGTTATCAGCCTATTATTAGTTTTTTCTTATAATCAATTTTCTAATTGGAAC
TACGCCTATAAATTCCGTTTTTATCCCGTTCTTTTTTATTCTGAATTTGATCGAATGAATGATCTGTATTTAGAACAACG
AGATTTTCTAAATCAATCCGCTAATGCACCTTCTCAATGGGATATTCAATCTTTTACTCCAAAATATAAAAATTATATTT
TAATTATTGGTGAAAGTATGCGAAAAGATTATATGTCGTTATATGGCTTTCCACTGAAAACCACGCCATTTTTAGAGCGT
GTGAAAGGCACAGTTTTTGAAAATTATTATTCTGCAGCACCGAATACGCAACCGTCTTTACAACACACCCTATATCGAGC
AGAAAAAGGGGAAACGGTTTATACGGATAATATTATTTCTTTAGCCAAAAAAGCGGGCGTGAAAACTTATTGGATTTCTA
ATCAAGGCAAAATTGGGGAATTTGATACGATGGCATCTCGTATTGGTCAAAGTGCGGATGAAACGGTTTTTATGAAGCCG
TTAGGTTACAATTCTAAAAAAGTTTATGACGATGAAATGTTGCCTGTATTAGATAAAGCCTTAAAAGAAAATATTACGAA
TCCAAAATTAATTGTGATTCATTTAATGGGCTCACATCCAGCCTTTTGTGAGCGTCTTCCGTACGAAGTTAAAAATTATT
TTATTAATCAATCTATGTCTTGTTATTTAGAATCGATTAAATATACGGATCAGTTTTTAGAAAAATTAAATTCGCAGTTA
GTATCGCAAAATGAACCCTATTCGGTGATTTACTTTTCTGATCATGGGCTTGCTCATTATGAGGATTCTGAAGGTTTATC
ATTGCATCCAAATAATCTTTATAAACAAAATTATGAAATTCCTTTCGTTATGTTTTCGAGTGATAGTAAAAAGCTAGAAA
AAATAAAAACGCCACAATCGGCATTTAATTTTGTTTATGGTTTTGCTGATTGGATGGGAATTAAGGAAAAGCATTTACAA
GGCGTGGATTTCTTCCATCCTGAAAAACAGGAAATTAAAGTATTTGATTGGAATAACGTTGTAAATGTTAAAGAGTTGGC
TGATGATCCAGCAAAATTACCAGAAGCCGTTCAGTAA

Upstream 100 bases:

>100_bases
GCAACAATAACAGGTTAAATGATAATTTGAGATAAATTTTGCTCAAAAGTGCGGTAAATTTCACCGCACTTTTTTACTTT
TGTGCAAAAGGAAGTTAATG

Downstream 100 bases:

>100_bases
ATAAGATCCTGCTTTATCATTTATCGGCTTGTGCTAGAATGAGCGGAATTTTTTTAAAAGGGAAATAGTATGTCCAAAAA
ATCAGGGCTTTCGTTTTTAT

Product: tRNA modification GTPase TrmE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MFGKKIIHSKTIWFYFLLFLFSIFTNMGLGNVLSENIPVSDYAILFAITAISFYFTPWVGRILITVLFLSALFYCSAGFF
YGIPSLGIIASVYETNINETLEYYTTIPFWIFLFQVSYIILFVALMKLSFYVKQQAFKWLNMAVISLLLVFSYNQFSNWN
YAYKFRFYPVLFYSEFDRMNDLYLEQRDFLNQSANAPSQWDIQSFTPKYKNYILIIGESMRKDYMSLYGFPLKTTPFLER
VKGTVFENYYSAAPNTQPSLQHTLYRAEKGETVYTDNIISLAKKAGVKTYWISNQGKIGEFDTMASRIGQSADETVFMKP
LGYNSKKVYDDEMLPVLDKALKENITNPKLIVIHLMGSHPAFCERLPYEVKNYFINQSMSCYLESIKYTDQFLEKLNSQL
VSQNEPYSVIYFSDHGLAHYEDSEGLSLHPNNLYKQNYEIPFVMFSSDSKKLEKIKTPQSAFNFVYGFADWMGIKEKHLQ
GVDFFHPEKQEIKVFDWNNVVNVKELADDPAKLPEAVQ

Sequences:

>Translated_518_residues
MFGKKIIHSKTIWFYFLLFLFSIFTNMGLGNVLSENIPVSDYAILFAITAISFYFTPWVGRILITVLFLSALFYCSAGFF
YGIPSLGIIASVYETNINETLEYYTTIPFWIFLFQVSYIILFVALMKLSFYVKQQAFKWLNMAVISLLLVFSYNQFSNWN
YAYKFRFYPVLFYSEFDRMNDLYLEQRDFLNQSANAPSQWDIQSFTPKYKNYILIIGESMRKDYMSLYGFPLKTTPFLER
VKGTVFENYYSAAPNTQPSLQHTLYRAEKGETVYTDNIISLAKKAGVKTYWISNQGKIGEFDTMASRIGQSADETVFMKP
LGYNSKKVYDDEMLPVLDKALKENITNPKLIVIHLMGSHPAFCERLPYEVKNYFINQSMSCYLESIKYTDQFLEKLNSQL
VSQNEPYSVIYFSDHGLAHYEDSEGLSLHPNNLYKQNYEIPFVMFSSDSKKLEKIKTPQSAFNFVYGFADWMGIKEKHLQ
GVDFFHPEKQEIKVFDWNNVVNVKELADDPAKLPEAVQ
>Mature_518_residues
MFGKKIIHSKTIWFYFLLFLFSIFTNMGLGNVLSENIPVSDYAILFAITAISFYFTPWVGRILITVLFLSALFYCSAGFF
YGIPSLGIIASVYETNINETLEYYTTIPFWIFLFQVSYIILFVALMKLSFYVKQQAFKWLNMAVISLLLVFSYNQFSNWN
YAYKFRFYPVLFYSEFDRMNDLYLEQRDFLNQSANAPSQWDIQSFTPKYKNYILIIGESMRKDYMSLYGFPLKTTPFLER
VKGTVFENYYSAAPNTQPSLQHTLYRAEKGETVYTDNIISLAKKAGVKTYWISNQGKIGEFDTMASRIGQSADETVFMKP
LGYNSKKVYDDEMLPVLDKALKENITNPKLIVIHLMGSHPAFCERLPYEVKNYFINQSMSCYLESIKYTDQFLEKLNSQL
VSQNEPYSVIYFSDHGLAHYEDSEGLSLHPNNLYKQNYEIPFVMFSSDSKKLEKIKTPQSAFNFVYGFADWMGIKEKHLQ
GVDFFHPEKQEIKVFDWNNVVNVKELADDPAKLPEAVQ

Specific function: Unknown

COG id: COG2194

COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoethanolamine transferase family [H]

Homologues:

Organism=Escherichia coli, GI1787035, Length=473, Percent_Identity=33.1923890063425, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI87082223, Length=360, Percent_Identity=30.2777777777778, Blast_Score=128, Evalue=8e-31,
Organism=Escherichia coli, GI1790392, Length=287, Percent_Identity=27.8745644599303, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI87082286, Length=321, Percent_Identity=25.8566978193146, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI87082372, Length=244, Percent_Identity=25.4098360655738, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 60361; Mature: 60361

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGKKIIHSKTIWFYFLLFLFSIFTNMGLGNVLSENIPVSDYAILFAITAISFYFTPWVG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RILITVLFLSALFYCSAGFFYGIPSLGIIASVYETNINETLEYYTTIPFWIFLFQVSYII
HHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LFVALMKLSFYVKQQAFKWLNMAVISLLLVFSYNQFSNWNYAYKFRFYPVLFYSEFDRMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEHHHHHHH
DLYLEQRDFLNQSANAPSQWDIQSFTPKYKNYILIIGESMRKDYMSLYGFPLKTTPFLER
HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHH
VKGTVFENYYSAAPNTQPSLQHTLYRAEKGETVYTDNIISLAKKAGVKTYWISNQGKIGE
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCCH
FDTMASRIGQSADETVFMKPLGYNSKKVYDDEMLPVLDKALKENITNPKLIVIHLMGSHP
HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCC
AFCERLPYEVKNYFINQSMSCYLESIKYTDQFLEKLNSQLVSQNEPYSVIYFSDHGLAHY
HHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
EDSEGLSLHPNNLYKQNYEIPFVMFSSDSKKLEKIKTPQSAFNFVYGFADWMGIKEKHLQ
CCCCCCEECCCCHHHCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCC
GVDFFHPEKQEIKVFDWNNVVNVKELADDPAKLPEAVQ
CCCCCCCCCCCEEEECCCCCCCHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MFGKKIIHSKTIWFYFLLFLFSIFTNMGLGNVLSENIPVSDYAILFAITAISFYFTPWVG
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
RILITVLFLSALFYCSAGFFYGIPSLGIIASVYETNINETLEYYTTIPFWIFLFQVSYII
HHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LFVALMKLSFYVKQQAFKWLNMAVISLLLVFSYNQFSNWNYAYKFRFYPVLFYSEFDRMN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEHHHHHHH
DLYLEQRDFLNQSANAPSQWDIQSFTPKYKNYILIIGESMRKDYMSLYGFPLKTTPFLER
HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHH
VKGTVFENYYSAAPNTQPSLQHTLYRAEKGETVYTDNIISLAKKAGVKTYWISNQGKIGE
HHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEEECCCCCCCH
FDTMASRIGQSADETVFMKPLGYNSKKVYDDEMLPVLDKALKENITNPKLIVIHLMGSHP
HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCC
AFCERLPYEVKNYFINQSMSCYLESIKYTDQFLEKLNSQLVSQNEPYSVIYFSDHGLAHY
HHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
EDSEGLSLHPNNLYKQNYEIPFVMFSSDSKKLEKIKTPQSAFNFVYGFADWMGIKEKHLQ
CCCCCCEECCCCHHHCCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCC
GVDFFHPEKQEIKVFDWNNVVNVKELADDPAKLPEAVQ
CCCCCCCCCCCEEEECCCCCCCHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]