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The map label for this gene is yffB [C]

Identifier: 148827244

GI number: 148827244

Start: 557794

End: 558138

Strand: Reverse

Name: yffB [C]

Synonym: CGSHiGG_03060

Alternate gene names: 148827244

Gene position: 558138-557794 (Counterclockwise)

Preceding gene: 148827245

Following gene: 148827243

Centisome position: 29.58

GC content: 37.68

Gene sequence:

>345_bases
ATGATTACAGTTTACGGCATTAAAAATTGCGATACAGTAAAGAAAGCGTTGAAATGGCTGGCGGATCACAATATCGAGCA
TAAACTTCACGACTACCGTGTTGATGGGTTAGATTTGAATTTTTTAACTCAGGCAGAAGCTCAATTTGGCTGGGATGTGT
TAGTGAATAAACGCAGTACAACTTGGCGTAATTTGGATGAGCAAGTTAAAAATTCCCTTGATAAAACGACCGCACTTTCC
GTGTTGGCTGAGAATCCAACCTTAATTAAACGCCCAATTATTTTACAAGATGGAAAGGCATTAATTGGATTTAATGAAAA
GGAATATCAGGCTGCTTTTGCTTAA

Upstream 100 bases:

>100_bases
TATCAATAAGTTGTTAGGTTAATTCATTTGAGATGAAGTAGTATAAGGGTTAAAATCCTCAATCTGATTAGATTGAGGAT
TTTTCTTTTTTAGGTGAAAT

Downstream 100 bases:

>100_bases
AGTGCGGTTATTTTCTTAGGAGTTTTTATGAGAGAAAAAGTGGTTTCGTTGGCGCAAGATTTAATTCATCGCTCATCTAT
TAGCCCGAATGACGAAGGCT

Product: succinyl-diaminopimelate desuccinylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAEAQFGWDVLVNKRSTTWRNLDEQVKNSLDKTTALS
VLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA

Sequences:

>Translated_114_residues
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAEAQFGWDVLVNKRSTTWRNLDEQVKNSLDKTTALS
VLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA
>Mature_114_residues
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAEAQFGWDVLVNKRSTTWRNLDEQVKNSLDKTTALS
VLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788815, Length=115, Percent_Identity=48.695652173913, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 13030; Mature: 13030

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAEAQFGWDVLVNKRST
CEEEEECCCCHHHHHHHHHHHCCCCCCCHHHEECCCCCCHHEECCCHHCCEEEEEECCCC
TWRNLDEQVKNSLDKTTALSVLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCEEECCCCHHHHCCCC
>Mature Secondary Structure
MITVYGIKNCDTVKKALKWLADHNIEHKLHDYRVDGLDLNFLTQAEAQFGWDVLVNKRST
CEEEEECCCCHHHHHHHHHHHCCCCCCCHHHEECCCCCCHHEECCCHHCCEEEEEECCCC
TWRNLDEQVKNSLDKTTALSVLAENPTLIKRPIILQDGKALIGFNEKEYQAAFA
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEECCCEEECCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]