Click here to switch to the map view.

The map label for this gene is hsdM [C]

Identifier: 148827015

GI number: 148827015

Start: 257317

End: 258993

Strand: Direct

Name: hsdM [C]

Synonym: CGSHiGG_01525

Alternate gene names: 148827015

Gene position: 257317-258993 (Clockwise)

Preceding gene: 148827012

Following gene: 148827016

Centisome position: 13.63

GC content: 47.47

Gene sequence:

>1677_bases
ATGCAAGCGAGACGAGACGAGACGACCAAAATTGTCGATGAAAATCACACATTACAACAAGCATTTTTAAATGAATTAGA
TGAAAAACTTTGGGCATCTGCCGATAAGCTCCGCCAACAACTTGATGCCGCTAACTATAAACATATCGTTCTTGGTCTTA
TCTTCTTAAAATACATTTCTGATAGTTTCACCCATCAACAAGAAAAAATTCAGGCGGAACTCTCCACACCTGAAAATCCC
CTCTATCTTGACCGCACTTTTTTTGATACTGAAGAAGAATATCAAGAAGCCTTAACCGCCGAGCTGGAAAATCGCGACTA
CTACACCGCCGACAATGTGTTCTGGGTGCCTGTTTCTGCGCGTTGGCAAGCCTTACAAGAAGTCTCTATTCTCAACACTG
GGGCAGAATTGCCTTGGGGAGGAAAATTTTCTGGCGTGGCAAAACTGATTGACGATGCCTTCGATGCCATTGAAAAAGAC
AACGAAAAACTCAAAGGCGTCCTCCAACGCATCAGCGGCTATGCCGTAAACGAAGACACCCTGCGCGGGCTGATTATCCT
CTTCTCCGATACTAACTTTACCCGCCCAACTTACAACGGCGAGCCCGTGCATTTGGGTGCAAAAGACATTCTCGGCCATG
TTTACGAATACTTCCTCGGTCGCTTTGCCCAAGCAGAAGGCAAACGCGGTGGGCAATATTTCACGCCAAAATCCATCGTT
TCCCTGATTGTCGAAATGCTCGAGCCCTATTCAGGACGCGTGTATGACCCAGCCATGGGCAGCGGCGGCTTTTTCGTGCA
AACCGAACGCTTTATCACCGCCCATCAAGGCAACATCAACAACGTTTCCATCTACGGGCAAGAATTCAACCCCACCACTT
GGAAACTTGCCGCCATGAATATGGCGATTCGTGGCATTGATTACGACTTCGGCAAATACAACGCCGACAGTTTCACCCAG
CCGCAACACATCGACAAAAAGATGGATTTCATTATGGCAAACCCGCCATTCAACATCAGCGATTGGTGGAGTGAATCCCT
TGCCGATGATCCACGTTGGGCATACGGCACACCGCCCAAAGGCAATGCAAACTATGCGTGGATTCAACATATGATTTACC
ACCTCTCGCCAAACGGCAAAATGGCATTATTGCTGGCCAACGGCTCCATGAGCAGCCAAACCAACAACGAAGGTGAAATC
CGCAAAGCCATCATCAATGCCGACTTGATCGAATGTATGGTTGCCCTGCCCGGTCAGCTCTTCACCAACACCCAAATCCC
CGCCTGTATTTGGTTTTTAAACTGCAACAAAAAACGTAAAGGCGAAGTGTTGTTTATCGATGCCCGCCAAATCGGCTATA
TGAAAGACCGTGTATTGCGTGATTTCACCGCTGATGACATCGCCAAAATTGCCAACACCCTCCATGCTTGGCAAACATCA
GACGGCTATGAAGACCAAGCCGCTTTCTGTAAATCCGCTACGTTAGAAGAGATTAAAGACAACGACTTCGTCCTCACACC
AGGGCGCTATGTCGGCACCGCAGAACAAGAAGATGACGGCGTGCCATTTGCAGAAAAAATGCAAAATCTGACCGCTCTTT
TGAAGGAACAGTTTGCAAAAAGTGCAGAGTTGGAAGCAGAGATTAAGAAGAATTTAGGGGGATTGGGGTATGAGTAA

Upstream 100 bases:

>100_bases
TCCCTTTCAACTTAATACTGTTTTTCGATAAAATGACACCTGATAATTTGTTTGAATATTCAAACTTCCGATAAAAATCA
CTTTACAGAGGGCATAATTT

Downstream 100 bases:

>100_bases
ACTTGGTAATTATATCTCGGTACAAAATGGATATGCTTTCAAAAGCAAAGATTTTATAAAGAATTTATCTGGAATGCCTG
TAATTAAAATTGGTAATGTA

Product: putative type I restriction enzyme HindVIIP M protein

Products: NA

Alternate protein names: M.HindVIIP [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MQARRDETTKIVDENHTLQQAFLNELDEKLWASADKLRQQLDAANYKHIVLGLIFLKYISDSFTHQQEKIQAELSTPENP
LYLDRTFFDTEEEYQEALTAELENRDYYTADNVFWVPVSARWQALQEVSILNTGAELPWGGKFSGVAKLIDDAFDAIEKD
NEKLKGVLQRISGYAVNEDTLRGLIILFSDTNFTRPTYNGEPVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIV
SLIVEMLEPYSGRVYDPAMGSGGFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKYNADSFTQ
PQHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANYAWIQHMIYHLSPNGKMALLLANGSMSSQTNNEGEI
RKAIINADLIECMVALPGQLFTNTQIPACIWFLNCNKKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIANTLHAWQTS
DGYEDQAAFCKSATLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGGLGYE

Sequences:

>Translated_558_residues
MQARRDETTKIVDENHTLQQAFLNELDEKLWASADKLRQQLDAANYKHIVLGLIFLKYISDSFTHQQEKIQAELSTPENP
LYLDRTFFDTEEEYQEALTAELENRDYYTADNVFWVPVSARWQALQEVSILNTGAELPWGGKFSGVAKLIDDAFDAIEKD
NEKLKGVLQRISGYAVNEDTLRGLIILFSDTNFTRPTYNGEPVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIV
SLIVEMLEPYSGRVYDPAMGSGGFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKYNADSFTQ
PQHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANYAWIQHMIYHLSPNGKMALLLANGSMSSQTNNEGEI
RKAIINADLIECMVALPGQLFTNTQIPACIWFLNCNKKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIANTLHAWQTS
DGYEDQAAFCKSATLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGGLGYE
>Mature_558_residues
MQARRDETTKIVDENHTLQQAFLNELDEKLWASADKLRQQLDAANYKHIVLGLIFLKYISDSFTHQQEKIQAELSTPENP
LYLDRTFFDTEEEYQEALTAELENRDYYTADNVFWVPVSARWQALQEVSILNTGAELPWGGKFSGVAKLIDDAFDAIEKD
NEKLKGVLQRISGYAVNEDTLRGLIILFSDTNFTRPTYNGEPVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIV
SLIVEMLEPYSGRVYDPAMGSGGFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKYNADSFTQ
PQHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPKGNANYAWIQHMIYHLSPNGKMALLLANGSMSSQTNNEGEI
RKAIINADLIECMVALPGQLFTNTQIPACIWFLNCNKKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIANTLHAWQTS
DGYEDQAAFCKSATLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGGLGYE

Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1790808, Length=292, Percent_Identity=22.2602739726027, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003356
- InterPro:   IPR002296 [H]

Pfam domain/function: PF02384 N6_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 63179; Mature: 63179

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARRDETTKIVDENHTLQQAFLNELDEKLWASADKLRQQLDAANYKHIVLGLIFLKYIS
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DSFTHQQEKIQAELSTPENPLYLDRTFFDTEEEYQEALTAELENRDYYTADNVFWVPVSA
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCEEEEECHH
RWQALQEVSILNTGAELPWGGKFSGVAKLIDDAFDAIEKDNEKLKGVLQRISGYAVNEDT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
LRGLIILFSDTNFTRPTYNGEPVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIV
CCEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
SLIVEMLEPYSGRVYDPAMGSGGFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMN
HHHHHHHCCCCCEEECCCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEHH
MAIRGIDYDFGKYNADSFTQPQHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPK
HHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC
GNANYAWIQHMIYHLSPNGKMALLLANGSMSSQTNNEGEIRKAIINADLIECMVALPGQL
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
FTNTQIPACIWFLNCNKKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIANTLHAWQTS
HCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
DGYEDQAAFCKSATLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAK
CCCCHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SAELEAEIKKNLGGLGYE
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQARRDETTKIVDENHTLQQAFLNELDEKLWASADKLRQQLDAANYKHIVLGLIFLKYIS
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
DSFTHQQEKIQAELSTPENPLYLDRTFFDTEEEYQEALTAELENRDYYTADNVFWVPVSA
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCEEEEECHH
RWQALQEVSILNTGAELPWGGKFSGVAKLIDDAFDAIEKDNEKLKGVLQRISGYAVNEDT
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC
LRGLIILFSDTNFTRPTYNGEPVHLGAKDILGHVYEYFLGRFAQAEGKRGGQYFTPKSIV
CCEEEEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
SLIVEMLEPYSGRVYDPAMGSGGFFVQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMN
HHHHHHHCCCCCEEECCCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEHH
MAIRGIDYDFGKYNADSFTQPQHIDKKMDFIMANPPFNISDWWSESLADDPRWAYGTPPK
HHHCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC
GNANYAWIQHMIYHLSPNGKMALLLANGSMSSQTNNEGEIRKAIINADLIECMVALPGQL
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
FTNTQIPACIWFLNCNKKRKGEVLFIDARQIGYMKDRVLRDFTADDIAKIANTLHAWQTS
HCCCCCCEEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
DGYEDQAAFCKSATLEEIKDNDFVLTPGRYVGTAEQEDDGVPFAEKMQNLTALLKEQFAK
CCCCHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH
SAELEAEIKKNLGGLGYE
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]