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The map label for this gene is ybbN [C]

Identifier: 148826228

GI number: 148826228

Start: 1237339

End: 1238196

Strand: Direct

Name: ybbN [C]

Synonym: CGSHiEE_06245

Alternate gene names: 148826228

Gene position: 1237339-1238196 (Clockwise)

Preceding gene: 148826227

Following gene: 148826229

Centisome position: 68.25

GC content: 37.3

Gene sequence:

>858_bases
ATGGCTGATTTTCCTTTTATCGTTGAGATCAACGAACAAAATCTTACTGAAATACTGCAACAATCCTTAGAAAAACCACT
TGTCATCAATTTTTACGCGCCAACACATAAAGAATCGGCGGATTTTTTGGTGCTACTTGAGCAAGTTGCAGAACAATATC
AAGGACAATTTATTCTTGGAAAAGTAGATTGTGAAAAAGAGCAAATGATTGCCGCACAATTCCGCATCCAAGCATTGCCA
ACCACCTATTTGTTTAAAGAAGCACAGGCATTAGATGCATTTCCAGGCATGCTTGATAAAGCATCATTAATCCAACGATT
AAGCATTATTTTACCGAAAGAGGAAGATTTAAAATTCCAACAAGCATTAGATTTCTTGCAAGTAGAAAATTACGAAGCTG
CATTGCCATTGTTGAAAGACGCATGGGAACTTTCCGATAAGAAAAACAGTGATGTTGCCCTGCTCTATGCGGAAACCTAT
ATTGCAATGAAGAAAACGGAGCCAGCACAAGAAATTTTAAATCAAATTCCATTGCAAGATCGAGATAGCCGTTGGCACGG
ATTACAAGCACAAATTGAGCTACAAATTCAAGCAGCCGATACACCTGAAATCCAACAATTACAGGCTGATTATGCTAAAA
ACCCAACAGCTGAAATTGCAATAAAACTTGCCGTACAACTTCATCAAGCTGGACGAAATGAAGAAGCATTAACACTACTT
TTCGGCATTTTAAAAACAGATTTAAGCGTGCAGAATGGCGAAGTTAAACAACAATTTTTATCTATTTTAAGCGCAATGGG
TAATGCTGATCCGCTGACAAATAAATTTCGTCGATTGCTTTATTCGCTGCTTTATTAA

Upstream 100 bases:

>100_bases
ATCCTAGAAAAACTTGCTTAATAATCGAAATGGTAAAACGTTTCTAAAATCTTCCGCACTTTGCTAAAATCAGCCATTAT
TTTTTTCACAAGGATAAAAC

Downstream 100 bases:

>100_bases
GCAAAAAGTTTATAATCAGTAAAATGCAACTTATTGCATTATATTATTACTTAACTACAAACAAGGATTCTTTATGTCAG
ATATCAAACACGCAAAACTT

Product: thioredoxin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILGKVDCEKEQMIAAQFRIQALP
TTYLFKEAQALDAFPGMLDKASLIQRLSIILPKEEDLKFQQALDFLQVENYEAALPLLKDAWELSDKKNSDVALLYAETY
IAMKKTEPAQEILNQIPLQDRDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLL
FGILKTDLSVQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY

Sequences:

>Translated_285_residues
MADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILGKVDCEKEQMIAAQFRIQALP
TTYLFKEAQALDAFPGMLDKASLIQRLSIILPKEEDLKFQQALDFLQVENYEAALPLLKDAWELSDKKNSDVALLYAETY
IAMKKTEPAQEILNQIPLQDRDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLL
FGILKTDLSVQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY
>Mature_284_residues
ADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILGKVDCEKEQMIAAQFRIQALPT
TYLFKEAQALDAFPGMLDKASLIQRLSIILPKEEDLKFQQALDFLQVENYEAALPLLKDAWELSDKKNSDVALLYAETYI
AMKKTEPAQEILNQIPLQDRDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLLF
GILKTDLSVQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY

Specific function: Unknown

COG id: COG3118

COG function: function code O; Thioredoxin domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081747, Length=280, Percent_Identity=51.7857142857143, Blast_Score=284, Evalue=6e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012335
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32399; Mature: 32267

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILG
CCCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE
KVDCEKEQMIAAQFRIQALPTTYLFKEAQALDAFPGMLDKASLIQRLSIILPKEEDLKFQ
ECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCHH
QALDFLQVENYEAALPLLKDAWELSDKKNSDVALLYAETYIAMKKTEPAQEILNQIPLQD
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHEECCCCHHHHHHHHCCCCC
RDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLL
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
FGILKTDLSVQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ADFPFIVEINEQNLTEILQQSLEKPLVINFYAPTHKESADFLVLLEQVAEQYQGQFILG
CCCCEEEEECCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEE
KVDCEKEQMIAAQFRIQALPTTYLFKEAQALDAFPGMLDKASLIQRLSIILPKEEDLKFQ
ECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHCCCHH
QALDFLQVENYEAALPLLKDAWELSDKKNSDVALLYAETYIAMKKTEPAQEILNQIPLQD
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHEECCCCHHHHHHHHCCCCC
RDSRWHGLQAQIELQIQAADTPEIQQLQADYAKNPTAEIAIKLAVQLHQAGRNEEALTLL
CCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH
FGILKTDLSVQNGEVKQQFLSILSAMGNADPLTNKFRRLLYSLLY
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]