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The map label for this gene is zntR [H]

Identifier: 148826149

GI number: 148826149

Start: 1153427

End: 1153834

Strand: Direct

Name: zntR [H]

Synonym: CGSHiEE_05780

Alternate gene names: 148826149

Gene position: 1153427-1153834 (Clockwise)

Preceding gene: 148826143

Following gene: 148826151

Centisome position: 63.62

GC content: 35.54

Gene sequence:

>408_bases
ATGAAAATTGGAGCACTTGCTAAAGCCCTAGGCTGTACCGTAGAAACCATCCGTTATTATGAACAACAAGGTTTAATCCC
GCCCCCAAAACGTACTTTAGGCAATTTTCGGCAATATAATGAAGAACACTTGCAACGTTTATCATTTATTTGTAACTGCC
GAAATTTAGATATTTCATTAAGTGAAATAAAAAGCCTACTGAATTTAGAAAATGCCTCCAAACAACAAGCAGAAGAAATT
AATCGTGTGTTAGATAAACACATTAAAGAGGTGGCAACAAGGATTCACGAACTCGCCCATTTACGGATGAAATTAATTGA
ATTACGTGAAAAAACAGTCTCGAATGATGAAGATCCAATGAAATTGCTATTGCAACATAGTGGCGTGAAATTTGTGCGAT
TAAAATAG

Upstream 100 bases:

>100_bases
TTCAATTCCATTTTGGATACTCCTTGTTTGTTTAAGAAAATCTAGGCGTATGATAAAATATGAAGTAACTTTAGAATCAA
GTCATTTTTTAAGGAAATTG

Downstream 100 bases:

>100_bases
CCGCACTTTTAAGATTATGGCTGACTAGATAAACGCTGTTTTGCTTCCTTATTGCCTAATTCAGCTGCTTTTTTCAGCCA
TTCCAATGATTTTTCAGGTT

Product: HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKIGALAKALGCTVETIRYYEQQGLIPPPKRTLGNFRQYNEEHLQRLSFICNCRNLDISLSEIKSLLNLENASKQQAEEI
NRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPMKLLLQHSGVKFVRLK

Sequences:

>Translated_135_residues
MKIGALAKALGCTVETIRYYEQQGLIPPPKRTLGNFRQYNEEHLQRLSFICNCRNLDISLSEIKSLLNLENASKQQAEEI
NRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPMKLLLQHSGVKFVRLK
>Mature_135_residues
MKIGALAKALGCTVETIRYYEQQGLIPPPKRTLGNFRQYNEEHLQRLSFICNCRNLDISLSEIKSLLNLENASKQQAEEI
NRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPMKLLLQHSGVKFVRLK

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786695, Length=128, Percent_Identity=29.6875, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1789687, Length=105, Percent_Identity=39.0476190476191, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 15663; Mature: 15663

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGALAKALGCTVETIRYYEQQGLIPPPKRTLGNFRQYNEEHLQRLSFICNCRNLDISL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCH
SEIKSLLNLENASKQQAEEINRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KLLLQHSGVKFVRLK
HHHHHHCCCEEEEEC
>Mature Secondary Structure
MKIGALAKALGCTVETIRYYEQQGLIPPPKRTLGNFRQYNEEHLQRLSFICNCRNLDISL
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCH
SEIKSLLNLENASKQQAEEINRVLDKHIKEVATRIHELAHLRMKLIELREKTVSNDEDPM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KLLLQHSGVKFVRLK
HHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]