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The map label for this gene is yoaB [C]

Identifier: 148826151

GI number: 148826151

Start: 1155219

End: 1155569

Strand: Direct

Name: yoaB [C]

Synonym: CGSHiEE_05800

Alternate gene names: 148826151

Gene position: 1155219-1155569 (Clockwise)

Preceding gene: 148826149

Following gene: 148826152

Centisome position: 63.72

GC content: 36.75

Gene sequence:

>351_bases
ATGACAATTCAACGCATTTTACCCAATGCACGTTTAAGTGAAGTTTCAATTCATAACAACCTCGCCTATTTTGCAGGGCA
AGTTCCAGAATTAACCATCGAGCAAAATACCTACGAACAAACCAAAGAAGTATTAGGTTTAATTGATAAATTGTTAGCAG
AAATTGGCTCCAATAAAAGCAATATTTTAACTGCGCAAATTTTCTTGGCAGATATGCAAGATTATGTTCAATTAAATCAA
GCTTGGGATGAATGGGTCGATCATGTTAGCCCACCAAGTCGAGCGACAGTGGAAGCTAAATTAGCGGATCCTCGTTGGAA
AGTTGAAATTGTTATTATTGCAACTTGTTAG

Upstream 100 bases:

>100_bases
AATTGAGAATAATTGTCGGATATTTTAGCCTAGTAAAGAGGATTTTACAAAGCAGTAAAGGCTATTTAGAATAGAAGAAA
ACACCCCAAAGGAGAACCCT

Downstream 100 bases:

>100_bases
TTTTTTAAGCCGAATAAACAGGAGAATATTATGGAAAATTGGACAAATGAAATTTGGGTAGCAATTGGTATCGCTTTTAT
TGTTGGGTTATTTATTGGTT

Product: putative translation initiation inhibitor, YjgF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTIQRILPNARLSEVSIHNNLAYFAGQVPELTIEQNTYEQTKEVLGLIDKLLAEIGSNKSNILTAQIFLADMQDYVQLNQ
AWDEWVDHVSPPSRATVEAKLADPRWKVEIVIIATC

Sequences:

>Translated_116_residues
MTIQRILPNARLSEVSIHNNLAYFAGQVPELTIEQNTYEQTKEVLGLIDKLLAEIGSNKSNILTAQIFLADMQDYVQLNQ
AWDEWVDHVSPPSRATVEAKLADPRWKVEIVIIATC
>Mature_115_residues
TIQRILPNARLSEVSIHNNLAYFAGQVPELTIEQNTYEQTKEVLGLIDKLLAEIGSNKSNILTAQIFLADMQDYVQLNQA
WDEWVDHVSPPSRATVEAKLADPRWKVEIVIIATC

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=50.8771929824561, Blast_Score=108, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13106; Mature: 12975

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQRILPNARLSEVSIHNNLAYFAGQVPELTIEQNTYEQTKEVLGLIDKLLAEIGSNKS
CCHHHHCCCCCCCEEEHHCCHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
NILTAQIFLADMQDYVQLNQAWDEWVDHVSPPSRATVEAKLADPRWKVEIVIIATC
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEC
>Mature Secondary Structure 
TIQRILPNARLSEVSIHNNLAYFAGQVPELTIEQNTYEQTKEVLGLIDKLLAEIGSNKS
CHHHHCCCCCCCEEEHHCCHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
NILTAQIFLADMQDYVQLNQAWDEWVDHVSPPSRATVEAKLADPRWKVEIVIIATC
CEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]