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The map label for this gene is licC [H]

Identifier: 148826063

GI number: 148826063

Start: 1059497

End: 1060198

Strand: Direct

Name: licC [H]

Synonym: CGSHiEE_05265

Alternate gene names: 148826063

Gene position: 1059497-1060198 (Clockwise)

Preceding gene: 148826062

Following gene: 148826064

Centisome position: 58.44

GC content: 34.33

Gene sequence:

>702_bases
ATGAATGCAATCATTTTAGCTGCAGGATTAGGCAGTCGTTTTAAAGACATCACACAAAGCACACATAAATCATTGTTAGA
TATTCACGGCACACCTAACTTAGAACGGACACTCACTTTTCTACGTCAAGCAAATATCGACAATATTGTCATTGTTACAG
GGTATTTACACGAACAATTCGAGTATCTAAAGAAAAAATATGACTGCACCTTGATTTACAACGAAAAATATCGCGAATAT
AACAGCATTTATTCCTTTTCTCTGGCGCAAGACTTCTTTAATGATTGTTATGTTATTGATGCGGATGTAGTGCTTAATCG
TAATATTTTTCTAACGAAACCATCACACAGCAAATATTTCACAGTTATTCGTTCGAACACTCATAATGAATGGCTACCGA
TTTTAAATAGCAATGGGCAAGTAATGCGTATTGAGATTGGATCATTAAACCAGCCTAGCTTGTCAGGGGTATCTTATTGG
ACAACTCGGGATTGCAATATCATTCTAACTTTGCTCAAAGAATACACAAGTGAAGTGCGGTTAAAAAATCCAAAACTTTA
TTGGGATACCATTCCGATGGAATATATAGAGAAATTGAATATCTATACGGAACAACTTAACAGTGATGATATATTTGAAA
TGGATAACCTTGATGACTATCACCACATTTTACAAAAATTGACACCAAACAAGGAAAAATAA

Upstream 100 bases:

>100_bases
ATCTTATCTATCAACAGCCAATTAAGCCCATTACCTTACTACTTACCTTATTATTAAGTGCAGGAGTGATCGTTACACTT
TATTACAAAGGGGAACAAAA

Downstream 100 bases:

>100_bases
TGAAAAAATTAACGCTCAGAGAACAACAGCTCGTTTGTCTCAATATATTAGATTATTTCCACGCATTATGTGAGCGACAC
CAAATTCACTATTCTCTTGG

Product: lic-1 operon protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNAIILAAGLGSRFKDITQSTHKSLLDIHGTPNLERTLTFLRQANIDNIVIVTGYLHEQFEYLKKKYDCTLIYNEKYREY
NSIYSFSLAQDFFNDCYVIDADVVLNRNIFLTKPSHSKYFTVIRSNTHNEWLPILNSNGQVMRIEIGSLNQPSLSGVSYW
TTRDCNIILTLLKEYTSEVRLKNPKLYWDTIPMEYIEKLNIYTEQLNSDDIFEMDNLDDYHHILQKLTPNKEK

Sequences:

>Translated_233_residues
MNAIILAAGLGSRFKDITQSTHKSLLDIHGTPNLERTLTFLRQANIDNIVIVTGYLHEQFEYLKKKYDCTLIYNEKYREY
NSIYSFSLAQDFFNDCYVIDADVVLNRNIFLTKPSHSKYFTVIRSNTHNEWLPILNSNGQVMRIEIGSLNQPSLSGVSYW
TTRDCNIILTLLKEYTSEVRLKNPKLYWDTIPMEYIEKLNIYTEQLNSDDIFEMDNLDDYHHILQKLTPNKEK
>Mature_233_residues
MNAIILAAGLGSRFKDITQSTHKSLLDIHGTPNLERTLTFLRQANIDNIVIVTGYLHEQFEYLKKKYDCTLIYNEKYREY
NSIYSFSLAQDFFNDCYVIDADVVLNRNIFLTKPSHSKYFTVIRSNTHNEWLPILNSNGQVMRIEIGSLNQPSLSGVSYW
TTRDCNIILTLLKEYTSEVRLKNPKLYWDTIPMEYIEKLNIYTEQLNSDDIFEMDNLDDYHHILQKLTPNKEK

Specific function: Unknown

COG id: COG4750

COG function: function code M; CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017189
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: NA

Molecular weight: Translated: 27367; Mature: 27367

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAIILAAGLGSRFKDITQSTHKSLLDIHGTPNLERTLTFLRQANIDNIVIVTGYLHEQF
CCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHH
EYLKKKYDCTLIYNEKYREYNSIYSFSLAQDFFNDCYVIDADVVLNRNIFLTKPSHSKYF
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEECCEEEECCCCCEEE
TVIRSNTHNEWLPILNSNGQVMRIEIGSLNQPSLSGVSYWTTRDCNIILTLLKEYTSEVR
EEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHE
LKNPKLYWDTIPMEYIEKLNIYTEQLNSDDIFEMDNLDDYHHILQKLTPNKEK
ECCCEEEEECCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNAIILAAGLGSRFKDITQSTHKSLLDIHGTPNLERTLTFLRQANIDNIVIVTGYLHEQF
CCEEEEECCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHH
EYLKKKYDCTLIYNEKYREYNSIYSFSLAQDFFNDCYVIDADVVLNRNIFLTKPSHSKYF
HHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEECCEEEECCCCCEEE
TVIRSNTHNEWLPILNSNGQVMRIEIGSLNQPSLSGVSYWTTRDCNIILTLLKEYTSEVR
EEEECCCCCCCCEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHE
LKNPKLYWDTIPMEYIEKLNIYTEQLNSDDIFEMDNLDDYHHILQKLTPNKEK
ECCCEEEEECCCHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800 [H]