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The map label for this gene is licB [H]

Identifier: 148826062

GI number: 148826062

Start: 1058622

End: 1059500

Strand: Direct

Name: licB [H]

Synonym: CGSHiEE_05260

Alternate gene names: 148826062

Gene position: 1058622-1059500 (Clockwise)

Preceding gene: 148826061

Following gene: 148826063

Centisome position: 58.39

GC content: 33.79

Gene sequence:

>879_bases
ATGCGTGGCTATCTCTTTGGCATACTGTCCGCTGTATTTTGGGCATTATCTGGACTGTTGTATAATGAATTGCCATTAAG
TGAATATACTGCGTTAGGGAAAGTAATTTCATTACTTTTTTTAATTGATTTTTGCTCGTTATTAGTTATCGGCATCACAT
TATGGCGAAAAAGTGCGGTAGATTTTCAAGGTGTTTTTTGGCAACCTGCGTTATCTGGCGTATTAGGTGGACCAATAGGA
ATGTCTGCCTATTTATTAAGCATTCATTATTTAACAATCTATTATGCTGCACCGCTTTCATCTCTCTTTCCTGTTTTCGC
TGCGTTAATGTCTTATTGGATTCTAAAAGAAAAAATTACCAAAACAGCCCAATTCGGATTCGCCTTGGCTATTATTTCTT
CTTCGTTGCTTGCTATTGAAGTAGGACAAGAAATAACCTTTAATACTATCGGTTTTATTTTTTTAATAATTTGTATATTA
GGGTGGTCATCTGAAATAGTGATATCCTCCTATACAATGCGTTCTCTCTCTGGACTTCAGGTGTATTTTTTAAGACTATG
TGGTTCAACTATTGGTTATTTATTGATTCTATTTATTCTTTCCTTGAAAAATTTCTCACTAGATATACTTAGTTTTAATT
ATGTACAAATTGCTGGTGTAATAATCTTTGGGGCATTATCTTACTACTGCTATTACCAAGCGATTTATCTGTTAAAACCA
ATCAAAGCAATGGCATTAAATATCACATATTCTGTATGGGCAATTGGACTTGGTTATCTTATCTATCAACAGCCAATTAA
GCCCATTACCTTACTACTTACCTTATTATTAAGTGCAGGAGTGATCGTTACACTTTATTACAAAGGGGAACAAAAATGA

Upstream 100 bases:

>100_bases
TTTTATGGACAAAAGTAAAAGAAGAACACGGCGAGAATTTTGGCGATTATGCGTTAAAACGCTTAGACGCAGCATTTAAA
CTGTTAGAGGAATTGCCATA

Downstream 100 bases:

>100_bases
ATGCAATCATTTTAGCTGCAGGATTAGGCAGTCGTTTTAAAGACATCACACAAAGCACACATAAATCATTGTTAGATATT
CACGGCACACCTAACTTAGA

Product: lic-1 operon protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MRGYLFGILSAVFWALSGLLYNELPLSEYTALGKVISLLFLIDFCSLLVIGITLWRKSAVDFQGVFWQPALSGVLGGPIG
MSAYLLSIHYLTIYYAAPLSSLFPVFAALMSYWILKEKITKTAQFGFALAIISSSLLAIEVGQEITFNTIGFIFLIICIL
GWSSEIVISSYTMRSLSGLQVYFLRLCGSTIGYLLILFILSLKNFSLDILSFNYVQIAGVIIFGALSYYCYYQAIYLLKP
IKAMALNITYSVWAIGLGYLIYQQPIKPITLLLTLLLSAGVIVTLYYKGEQK

Sequences:

>Translated_292_residues
MRGYLFGILSAVFWALSGLLYNELPLSEYTALGKVISLLFLIDFCSLLVIGITLWRKSAVDFQGVFWQPALSGVLGGPIG
MSAYLLSIHYLTIYYAAPLSSLFPVFAALMSYWILKEKITKTAQFGFALAIISSSLLAIEVGQEITFNTIGFIFLIICIL
GWSSEIVISSYTMRSLSGLQVYFLRLCGSTIGYLLILFILSLKNFSLDILSFNYVQIAGVIIFGALSYYCYYQAIYLLKP
IKAMALNITYSVWAIGLGYLIYQQPIKPITLLLTLLLSAGVIVTLYYKGEQK
>Mature_292_residues
MRGYLFGILSAVFWALSGLLYNELPLSEYTALGKVISLLFLIDFCSLLVIGITLWRKSAVDFQGVFWQPALSGVLGGPIG
MSAYLLSIHYLTIYYAAPLSSLFPVFAALMSYWILKEKITKTAQFGFALAIISSSLLAIEVGQEITFNTIGFIFLIICIL
GWSSEIVISSYTMRSLSGLQVYFLRLCGSTIGYLLILFILSLKNFSLDILSFNYVQIAGVIIFGALSYYCYYQAIYLLKP
IKAMALNITYSVWAIGLGYLIYQQPIKPITLLLTLLLSAGVIVTLYYKGEQK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32495; Mature: 32495

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYLFGILSAVFWALSGLLYNELPLSEYTALGKVISLLFLIDFCSLLVIGITLWRKSAV
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFQGVFWQPALSGVLGGPIGMSAYLLSIHYLTIYYAAPLSSLFPVFAALMSYWILKEKIT
CCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTAQFGFALAIISSSLLAIEVGQEITFNTIGFIFLIICILGWSSEIVISSYTMRSLSGLQ
HHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
VYFLRLCGSTIGYLLILFILSLKNFSLDILSFNYVQIAGVIIFGALSYYCYYQAIYLLKP
HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKAMALNITYSVWAIGLGYLIYQQPIKPITLLLTLLLSAGVIVTLYYKGEQK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCC
>Mature Secondary Structure
MRGYLFGILSAVFWALSGLLYNELPLSEYTALGKVISLLFLIDFCSLLVIGITLWRKSAV
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DFQGVFWQPALSGVLGGPIGMSAYLLSIHYLTIYYAAPLSSLFPVFAALMSYWILKEKIT
CCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTAQFGFALAIISSSLLAIEVGQEITFNTIGFIFLIICILGWSSEIVISSYTMRSLSGLQ
HHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHH
VYFLRLCGSTIGYLLILFILSLKNFSLDILSFNYVQIAGVIIFGALSYYCYYQAIYLLKP
HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKAMALNITYSVWAIGLGYLIYQQPIKPITLLLTLLLSAGVIVTLYYKGEQK
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800 [H]