Click here to switch to the map view.

The map label for this gene is ydjA [C]

Identifier: 148826064

GI number: 148826064

Start: 1063077

End: 1063532

Strand: Direct

Name: ydjA [C]

Synonym: CGSHiEE_05290

Alternate gene names: 148826064

Gene position: 1063077-1063532 (Clockwise)

Preceding gene: 148826063

Following gene: 148826068

Centisome position: 58.64

GC content: 41.67

Gene sequence:

>456_bases
ATGCGTGTGCCAGATCACGGAAAATTACATCCTTATCATTTTATTGTAATGGAAAATGAGAGCTTAAATAAATTAGAAAC
GCTACTTAAAGCTGCCGTTGTAGAATTTGATCTTGGGGAAGAAAAATTGATGAAAGCCGAAAACCTAGCACATCGCGCAC
CTATGGTTATTGGCGTGGTAGCAAAAATCGATCCAACTATCGCTAAAGTGCCTGGTTGGGAACAAATGCTAAGTGCAGGT
TGTGCAACTTATGGATTACAACTGGCTGCACAAGCACAAGGGTTTGATAATGTGTGGATTTCAGGGAAATGGGTTAATGG
TACTGCATTACGAGAAGCGTTCGGATGCCGTGAACAAGATCGTGTGATTGCGTTAGTCATGATTGGCACGGGCATGGAGA
AAGCCGAACGTGAATGCCGTGTTATCGATACAAAAGATTTTGTAACCTATCTATAA

Upstream 100 bases:

>100_bases
ATGGATGCACTTACACTTTTAACCACAAGAAAATCAAACAAAAAATTAGACCGTACCTGCACCTAATGCAGAACAGCTTG
AGCGTATTTTCGAAGCAGCA

Downstream 100 bases:

>100_bases
AATATTGCTTGCTTTCCTCAATACTTAGAGGAAAGCAAAATATTGCCCTACTCTTCTTCCAATTCATCCGCCATCGCTGC
CAATATTTCTCGTGTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MRVPDHGKLHPYHFIVMENESLNKLETLLKAAVVEFDLGEEKLMKAENLAHRAPMVIGVVAKIDPTIAKVPGWEQMLSAG
CATYGLQLAAQAQGFDNVWISGKWVNGTALREAFGCREQDRVIALVMIGTGMEKAERECRVIDTKDFVTYL

Sequences:

>Translated_151_residues
MRVPDHGKLHPYHFIVMENESLNKLETLLKAAVVEFDLGEEKLMKAENLAHRAPMVIGVVAKIDPTIAKVPGWEQMLSAG
CATYGLQLAAQAQGFDNVWISGKWVNGTALREAFGCREQDRVIALVMIGTGMEKAERECRVIDTKDFVTYL
>Mature_151_residues
MRVPDHGKLHPYHFIVMENESLNKLETLLKAAVVEFDLGEEKLMKAENLAHRAPMVIGVVAKIDPTIAKVPGWEQMLSAG
CATYGLQLAAQAQGFDNVWISGKWVNGTALREAFGCREQDRVIALVMIGTGMEKAERECRVIDTKDFVTYL

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=151, Percent_Identity=42.3841059602649, Blast_Score=134, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 16803; Mature: 16803

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVPDHGKLHPYHFIVMENESLNKLETLLKAAVVEFDLGEEKLMKAENLAHRAPMVIGVV
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEE
AKIDPTIAKVPGWEQMLSAGCATYGLQLAAQAQGFDNVWISGKWVNGTALREAFGCREQD
ECCCCCHHCCCCHHHHHHCCHHHHHHHHEECCCCCCCEEEEEEEECCHHHHHHHCCCCCC
RVIALVMIGTGMEKAERECRVIDTKDFVTYL
CEEEEEEECCCCHHHCCCCEEECCHHHHHCC
>Mature Secondary Structure
MRVPDHGKLHPYHFIVMENESLNKLETLLKAAVVEFDLGEEKLMKAENLAHRAPMVIGVV
CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEE
AKIDPTIAKVPGWEQMLSAGCATYGLQLAAQAQGFDNVWISGKWVNGTALREAFGCREQD
ECCCCCHHCCCCHHHHHHCCHHHHHHHHEECCCCCCCEEEEEEEECCHHHHHHHCCCCCC
RVIALVMIGTGMEKAERECRVIDTKDFVTYL
CEEEEEEECCCCHHHCCCCEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]