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The map label for this gene is ybgJ [C]

Identifier: 148825731

GI number: 148825731

Start: 688573

End: 689214

Strand: Direct

Name: ybgJ [C]

Synonym: CGSHiEE_03390

Alternate gene names: 148825731

Gene position: 688573-689214 (Clockwise)

Preceding gene: 148825730

Following gene: 148825732

Centisome position: 37.98

GC content: 43.15

Gene sequence:

>642_bases
ATGAATATCGTTCCGATCAGTGAATCGGCGGTGGTTTGCTCTTTGCCACCCCCAGCTTCCATTCAACAACAACGCCAATT
ATGGGCGTTTGCTCGTCAATTGCAATCAGAACAAGATATTGTAGAAGTTGTCTTGGGAATGAATAATCTTACGGTTTTTA
CCGATTTTTTCGTGGATTTTAAGCCGCTTGTGCAACGTTTAGAACAACTTTGGGCTGAGTTGAAAGTATCGGATTTTCAA
GGGCGTCATATTGAAATTCCTGTTATTTATGGGGGAGAGCGAGGTCAGGATTTATCTGATGTAGCGAAATTTCATCAGAC
AACACCAAAGCGGATTATTCAGATGCACAGTGAGCCTATTTATACTGTGTATATGATTGGCTTCCAAGCGGGCTTTCCTT
ATTTGGGTGGTTTACCTGAAAATTTACACACGCCGCGTCGCGCCACGCCAAGAACGGTTGTTCCTGCTGGTTCTGTTGGT
ATTGGGGGTGCGCAAACGGGGATTTATCCTTTTTCTTCGCCAGGTGGGTGGCAGTTGATCGGTTATACTAAACAAGCACT
TTTTGATAAAAATCAAGCACAACCAACCTTATTACAAGCTGGCGATACTGTGAAATTTATTGTGGATGGGATTGAACTAT
GA

Upstream 100 bases:

>100_bases
TTAAATAAAAAATAAAGACTTGACAAAACCTATAAATATCCTTTAAAAGAGCTGTAACAAAAAAATAACAAATCACATAA
CATCATATAAAGGGTATCTT

Downstream 100 bases:

>100_bases
TTGATATTCTTGATGTGAAATCCCGCGCCACCATTCAAGATTTAGGGCGTTTTGGTTTACGCCGATTTGGCATTAGCCAT
TGTGGGGCAATGGATAAATT

Product: allophanate hydrolase subunit 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPKRIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVDGIEL

Sequences:

>Translated_213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPKRIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVDGIEL
>Mature_213_residues
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDFKPLVQRLEQLWAELKVSDFQ
GRHIEIPVIYGGERGQDLSDVAKFHQTTPKRIIQMHSEPIYTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVG
IGGAQTGIYPFSSPGGWQLIGYTKQALFDKNQAQPTLLQAGDTVKFIVDGIEL

Specific function: Unknown

COG id: COG2049

COG function: function code E; Allophanate hydrolase subunit 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786929, Length=206, Percent_Identity=48.0582524271845, Blast_Score=206, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003833
- InterPro:   IPR020899
- InterPro:   IPR010016
- InterPro:   IPR002130 [H]

Pfam domain/function: PF02682 AHS1 [H]

EC number: NA

Molecular weight: Translated: 23626; Mature: 23626

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDF
CCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHH
KPLVQRLEQLWAELKVSDFQGRHIEIPVIYGGERGQDLSDVAKFHQTTPKRIIQMHSEPI
HHHHHHHHHHHHHHECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCE
YTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVGIGGAQTGIYPFSSPGGWQLI
EEEEEEEECCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEE
GYTKQALFDKNQAQPTLLQAGDTVKFIVDGIEL
EEHHHHHHCCCCCCCCEEECCCEEEEEECCCCC
>Mature Secondary Structure
MNIVPISESAVVCSLPPPASIQQQRQLWAFARQLQSEQDIVEVVLGMNNLTVFTDFFVDF
CCEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHH
KPLVQRLEQLWAELKVSDFQGRHIEIPVIYGGERGQDLSDVAKFHQTTPKRIIQMHSEPI
HHHHHHHHHHHHHHECCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHCCCCE
YTVYMIGFQAGFPYLGGLPENLHTPRRATPRTVVPAGSVGIGGAQTGIYPFSSPGGWQLI
EEEEEEEECCCCCCCCCCCHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEE
GYTKQALFDKNQAQPTLLQAGDTVKFIVDGIEL
EEHHHHHHCCCCCCCCEEECCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]