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The map label for this gene is kdkA [H]

Identifier: 148825460

GI number: 148825460

Start: 333797

End: 334522

Strand: Direct

Name: kdkA [H]

Synonym: CGSHiEE_01760

Alternate gene names: 148825460

Gene position: 333797-334522 (Clockwise)

Preceding gene: 148825456

Following gene: 148825461

Centisome position: 18.41

GC content: 38.84

Gene sequence:

>726_bases
ATGCAGCAATTCCAACAAGATAACCAATATTTTATCTTTAATTTTGACCGCACTTTTGAGCAAGCAACCGAGTTTTTCCA
AGCAGAATTTTGGCAAAAACAAGAACGAGTGATAGGGAGTGCAAAAGGTCGAGGCACCACTTATTTCTTGCAAACCGAAG
ATTGGTTTGGTGTAAATTGTGCGTTGCGTCATTATTATCGCGGTGGACTTTGGGGTAAACTGAACAAAGATCGTTATCGT
TTTTCTGCTCTTGAAACTACCCGTAGTTTTGCTGAGTTTCATTTGTTGCAACGTTTGTATGAAGCGGGGTTACCTGTGCC
TAAACCCATTGCTGCACGTATTCAAAAAGGCAAGTTAGGTATTTGCTATCAAGCGGATATTTTGACGGAAAAAATCGAAA
ACGCGCAGGATTTAACCGCACTTTTACAAACACAAACATTGCCAAAAGAAACTTGGAGGCAAATTGGTCGTTTGATTCGA
AAACTACATGATTTACAGATTTGCCATACAGACTTGAATGCACACAATATTTTGCTTCAACAAGCTGAACAAGGGCAAAA
ATGTTGGTTACTGGATTTTGATAAGTGCGGCGAAAAATCTGGAGATTTTTGGAAAGTGCAAAATCTGAACCGTTTAAAAC
GTTCCTTCGAAAAAGAAGTTGGACGAATGAATATTCAATTTACCGAGCAAAACTGGGCTGATTTAATGGCGGCTTATCAT
CAATAA

Upstream 100 bases:

>100_bases
TGGAGCTTCGGTAAAAAGTGGCATTAACGTTCCTTTATCATTTAATTTGTGCCTATTTTAAAGTAGAATGACCCCATTTT
CTATTCATAACAACGTTCTA

Downstream 100 bases:

>100_bases
AAGGATTGATTATGAAACAAAAAATCGTACTTGCTACAGGCAATAAAGGAAAAGTAAAAGAAATGGCTGATGTCCTATCT
GATTTTGGTTTTGAAGTGAT

Product: 3-deoxy-D-manno-octulosonic-acid kinase

Products: NA

Alternate protein names: KDO kinase [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MQQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGTTYFLQTEDWFGVNCALRHYYRGGLWGKLNKDRYR
FSALETTRSFAEFHLLQRLYEAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKETWRQIGRLIR
KLHDLQICHTDLNAHNILLQQAEQGQKCWLLDFDKCGEKSGDFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLMAAYH
Q

Sequences:

>Translated_241_residues
MQQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGTTYFLQTEDWFGVNCALRHYYRGGLWGKLNKDRYR
FSALETTRSFAEFHLLQRLYEAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKETWRQIGRLIR
KLHDLQICHTDLNAHNILLQQAEQGQKCWLLDFDKCGEKSGDFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLMAAYH
Q
>Mature_241_residues
MQQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGTTYFLQTEDWFGVNCALRHYYRGGLWGKLNKDRYR
FSALETTRSFAEFHLLQRLYEAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKETWRQIGRLIR
KLHDLQICHTDLNAHNILLQQAEQGQKCWLLDFDKCGEKSGDFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLMAAYH
Q

Specific function: ATP-dependent phosphorylation of 3-deoxy-D-manno- octulosonic acid at the 4-OH position [H]

COG id: COG0515

COG function: function code RTKL; Serine/threonine protein kinase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein kinase superfamily. KdkA/rfaP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022826
- InterPro:   IPR011009
- InterPro:   IPR010440 [H]

Pfam domain/function: PF06293 Kdo [H]

EC number: NA

Molecular weight: Translated: 28544; Mature: 28544

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGTTYFLQTEDWFGVNC
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH
ALRHYYRGGLWGKLNKDRYRFSALETTRSFAEFHLLQRLYEAGLPVPKPIAARIQKGKLG
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCE
ICYQADILTEKIENAQDLTALLQTQTLPKETWRQIGRLIRKLHDLQICHTDLNAHNILLQ
EEEEHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
QAEQGQKCWLLDFDKCGEKSGDFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLMAAYH
HHCCCCEEEEEEHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHC
Q
C
>Mature Secondary Structure
MQQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGTTYFLQTEDWFGVNC
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHH
ALRHYYRGGLWGKLNKDRYRFSALETTRSFAEFHLLQRLYEAGLPVPKPIAARIQKGKLG
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCE
ICYQADILTEKIENAQDLTALLQTQTLPKETWRQIGRLIRKLHDLQICHTDLNAHNILLQ
EEEEHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
QAEQGQKCWLLDFDKCGEKSGDFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLMAAYH
HHCCCCEEEEEEHHHCCCCCCCEEEHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA