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The map label for this gene is ispH2 [H]

Identifier: 148824589

GI number: 148824589

Start: 3807565

End: 3808560

Strand: Reverse

Name: ispH2 [H]

Synonym: TBFG_13416

Alternate gene names: 148824589

Gene position: 3808560-3807565 (Counterclockwise)

Preceding gene: 148824590

Following gene: 148824588

Centisome position: 86.08

GC content: 62.85

Gene sequence:

>996_bases
GTGCTGATGGCTGAGGTGTTCGTGGGACCGGTCGCACAGGGATACGCTTCGGGTGAAGTCACGGTGCTGTTGGCGTCGCC
GCGGTCGTTTTGCGCCGGTGTAGAGCGTGCTATCGAGACGGTCAAGCGAGTGCTTGACGTGGCCGAAGGCCCGGTGTATG
TGCGCAAGCAAATCGTGCACAACACTGTTGTGGTTGCCGAGTTGCGGGACCGGGGAGCAGTGTTCGTCGAGGATCTCGAC
GAGATTCCCGATCCGCCGCCGCCGGGGGCGGTCGTGGTGTTCTCCGCGCATGGGGTTTCCCCGGCGGTGCGCGCGGGCGC
TGATGAGCGGGGACTGCAGGTCGTCGACGCGACCTGCCCACTGGTGGCGAAAGTCCACGCTGAAGCCGCACGGTTTGCCG
CGCGCGGTGACACGGTGGTCTTCATCGGGCACGCCGGACATGAGGAGACCGAAGGCACGCTTGGCGTCGCTCCGCGGTCA
ACATTATTGGTGCAGACACCCGCTGATGTGGCAGCGTTGAACCTGCCCGAGGGTACCCAGCTATCGTATCTGACCCAGAC
AACCCTGGCACTTGATGAAACTGCCGATGTCATTGATGCGCTGCGCGCGAGGTTTCCGACGTTGGGCCAACCCCCCTCTG
AAGACATCTGCTATGCCACCACGAACAGACAGCGTGCGCTGCAATCGATGGTCGGTGAATGTGACGTTGTGTTGGTGATT
GGCTCGTGCAATTCGTCGAATTCGCGGCGTCTGGTCGAGTTGGCGCAGCGAAGTGGGACGCCGGCCTACTTGATTGACGG
GCCTGATGACATTGAGCCCGAATGGCTGTCGTCGGTCTCGACGATCGGTGTCACCGCGGGAGCCTCCGCGCCGCCACGAC
TGGTGGGGCAGGTGATTGATGCACTTCGCGGATACGCCTCGATCACCGTGGTGGAACGCTCGATAGCGACCGAGACGGTG
CGATTCGGCCTTCCCAAACAGGTTCGCGCGCAATGA

Upstream 100 bases:

>100_bases
GATGCGCCGATGAACGCATCCAGGCTGCTATTGCGGCACTGCCCGATGCGGTGCGATCCCCAGACCTGATCGCGTTGTCG
CAACTGATATGTCGCCGGGA

Downstream 100 bases:

>100_bases
CAACCACGATTCGCAACGGACGCGGGGACTTGATTACCGCGATCGGCGGACCTTGCGATGTGCAGGCATTGCCCGAAAGC
CAGCTGCCAGAGCTGGCCGT

Product: lytB-related protein lytB1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MLMAEVFVGPVAQGYASGEVTVLLASPRSFCAGVERAIETVKRVLDVAEGPVYVRKQIVHNTVVVAELRDRGAVFVEDLD
EIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRS
TLLVQTPADVAALNLPEGTQLSYLTQTTLALDETADVIDALRARFPTLGQPPSEDICYATTNRQRALQSMVGECDVVLVI
GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEPEWLSSVSTIGVTAGASAPPRLVGQVIDALRGYASITVVERSIATETV
RFGLPKQVRAQ

Sequences:

>Translated_331_residues
MLMAEVFVGPVAQGYASGEVTVLLASPRSFCAGVERAIETVKRVLDVAEGPVYVRKQIVHNTVVVAELRDRGAVFVEDLD
EIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRS
TLLVQTPADVAALNLPEGTQLSYLTQTTLALDETADVIDALRARFPTLGQPPSEDICYATTNRQRALQSMVGECDVVLVI
GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEPEWLSSVSTIGVTAGASAPPRLVGQVIDALRGYASITVVERSIATETV
RFGLPKQVRAQ
>Mature_331_residues
MLMAEVFVGPVAQGYASGEVTVLLASPRSFCAGVERAIETVKRVLDVAEGPVYVRKQIVHNTVVVAELRDRGAVFVEDLD
EIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCPLVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRS
TLLVQTPADVAALNLPEGTQLSYLTQTTLALDETADVIDALRARFPTLGQPPSEDICYATTNRQRALQSMVGECDVVLVI
GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEPEWLSSVSTIGVTAGASAPPRLVGQVIDALRGYASITVVERSIATETV
RFGLPKQVRAQ

Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]

COG id: COG0761

COG function: function code IM; Penicillin tolerance protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ispH family [H]

Homologues:

Organism=Escherichia coli, GI1786212, Length=313, Percent_Identity=50.7987220447284, Blast_Score=313, Evalue=8e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003451 [H]

Pfam domain/function: PF02401 LYTB [H]

EC number: =1.17.1.2 [H]

Molecular weight: Translated: 34911; Mature: 34911

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMAEVFVGPVAQGYASGEVTVLLASPRSFCAGVERAIETVKRVLDVAEGPVYVRKQIVH
CEEHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NTVVVAELRDRGAVFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCP
CEEEEEEECCCCCEEEHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCEEEECCCC
LVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADVAALNLPEGTQ
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCEEEEECCCCCEEEECCCCCE
LSYLTQTTLALDETADVIDALRARFPTLGQPPSEDICYATTNRQRALQSMVGECDVVLVI
EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEE
GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEPEWLSSVSTIGVTAGASAPPRLVGQVID
ECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHH
ALRGYASITVVERSIATETVRFGLPKQVRAQ
HHHCCCEEEEEHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MLMAEVFVGPVAQGYASGEVTVLLASPRSFCAGVERAIETVKRVLDVAEGPVYVRKQIVH
CEEHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
NTVVVAELRDRGAVFVEDLDEIPDPPPPGAVVVFSAHGVSPAVRAGADERGLQVVDATCP
CEEEEEEECCCCCEEEHHHHHCCCCCCCCEEEEEECCCCCHHHHCCCCCCCCEEEECCCC
LVAKVHAEAARFAARGDTVVFIGHAGHEETEGTLGVAPRSTLLVQTPADVAALNLPEGTQ
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEECCCCEEEEECCCCCEEEECCCCCE
LSYLTQTTLALDETADVIDALRARFPTLGQPPSEDICYATTNRQRALQSMVGECDVVLVI
EEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEE
GSCNSSNSRRLVELAQRSGTPAYLIDGPDDIEPEWLSSVSTIGVTAGASAPPRLVGQVID
ECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHEEECCCCCCHHHHHHHHH
ALRGYASITVVERSIATETVRFGLPKQVRAQ
HHHCCCEEEEEHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]