| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824014
Identifier: 148824014
GI number: 148824014
Start: 3144530
End: 3145270
Strand: Reverse
Name: 148824014
Synonym: TBFG_12839
Alternate gene names: NA
Gene position: 3145270-3144530 (Counterclockwise)
Preceding gene: 148824015
Following gene: 148824013
Centisome position: 71.09
GC content: 68.83
Gene sequence:
>741_bases TTGGGCACGAATCCGGCTGTGGTGGTGAGCAAGACACGAGTACTGTCATCACTATTGGATGCACTGGATGACCGGCCTGA TTCAGCAGGACCAATGGAACTGCCCGGGGCAAAACGTCTCGGAGATGATCGGCGTCCCCTCGGAACCCTGCGGTGCTGGC GTCATTCGGACATCGGTCCGGCTCGCGGGATCGTGGTGACGCCAGCGCTGAAGGAGTGGAGCGCGGCGGTGCACGCGCTG CTGGACGGCCGGCAGACGGTGCTGCTGCGTAAGGGCGGGATCGGCGAGAAGCGCTTCGAGGTGGCGGCCCACGAGTTCTT GTTGTTCCCGACGGTCGCGCACAGCCACGCCGAGCGGGTTCGCCCCGAGCACCGCGACCTGCTGGGCCCGGCGGCCGCCG ACAGCACCGACGAGTGTGTGCTACTGCGGGCCGCAGCGAAAGTTGTTGCCGCACTGCCGGTTAACCGGCCAGAGGGTCTG GACGCCATCGAGGATCTGCACATCTGGACCGCCGAGTCGGTGCGCGCCGACCGGCTCGACTTTCGGCCCAAGCACAAACT GGCCGTCTTGGTGGTCTCGGCGATCCCGCTGGCCGAGCCGGTCCGGCTGGCGCGTAGGCCCGAGTACGGCGGTTGCACCA GCTGGGTGCAGCTGCCGGTGACGCCGACGTTGGCGGCGCCGGTGCACGACGAGGCCGCGCTGGCCGAGGTCGCCGCCCGG GTCCGCGAGGCCGTGGGTTGA
Upstream 100 bases:
>100_bases GCGCTGGCGGTGCTGCGGTCCTGATCAACCTGCCGGCGATCGTGCCGTTCCGCTGGCACGGTTGCGGCTGGACGCGGCTG AATCGACTAGATGAGAGCAG
Downstream 100 bases:
>100_bases CTGGGCGGCATCGCTTGGGTCTGAGCTGTACGCCCAGTCGGCGCTGCGAGTGATCTGCTGTCGGTTCGGTCCCTGCTGGC GTCAATTGACGGCGCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MGTNPAVVVSKTRVLSSLLDALDDRPDSAGPMELPGAKRLGDDRRPLGTLRCWRHSDIGPARGIVVTPALKEWSAAVHAL LDGRQTVLLRKGGIGEKRFEVAAHEFLLFPTVAHSHAERVRPEHRDLLGPAAADSTDECVLLRAAAKVVAALPVNRPEGL DAIEDLHIWTAESVRADRLDFRPKHKLAVLVVSAIPLAEPVRLARRPEYGGCTSWVQLPVTPTLAAPVHDEAALAEVAAR VREAVG
Sequences:
>Translated_246_residues MGTNPAVVVSKTRVLSSLLDALDDRPDSAGPMELPGAKRLGDDRRPLGTLRCWRHSDIGPARGIVVTPALKEWSAAVHAL LDGRQTVLLRKGGIGEKRFEVAAHEFLLFPTVAHSHAERVRPEHRDLLGPAAADSTDECVLLRAAAKVVAALPVNRPEGL DAIEDLHIWTAESVRADRLDFRPKHKLAVLVVSAIPLAEPVRLARRPEYGGCTSWVQLPVTPTLAAPVHDEAALAEVAAR VREAVG >Mature_245_residues GTNPAVVVSKTRVLSSLLDALDDRPDSAGPMELPGAKRLGDDRRPLGTLRCWRHSDIGPARGIVVTPALKEWSAAVHALL DGRQTVLLRKGGIGEKRFEVAAHEFLLFPTVAHSHAERVRPEHRDLLGPAAADSTDECVLLRAAAKVVAALPVNRPEGLD AIEDLHIWTAESVRADRLDFRPKHKLAVLVVSAIPLAEPVRLARRPEYGGCTSWVQLPVTPTLAAPVHDEAALAEVAARV REAVG
Specific function: Unknown
COG id: COG4293
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26525; Mature: 26394
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTNPAVVVSKTRVLSSLLDALDDRPDSAGPMELPGAKRLGDDRRPLGTLRCWRHSDIGP CCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHCCCCCCC ARGIVVTPALKEWSAAVHALLDGRQTVLLRKGGIGEKRFEVAAHEFLLFPTVAHSHAERV CCCEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC RPEHRDLLGPAAADSTDECVLLRAAAKVVAALPVNRPEGLDAIEDLHIWTAESVRADRLD CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEECCCCCCHHCCC FRPKHKLAVLVVSAIPLAEPVRLARRPEYGGCTSWVQLPVTPTLAAPVHDEAALAEVAAR CCCCCHHEEEEEHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH VREAVG HHHHCC >Mature Secondary Structure GTNPAVVVSKTRVLSSLLDALDDRPDSAGPMELPGAKRLGDDRRPLGTLRCWRHSDIGP CCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHCCCCCCC ARGIVVTPALKEWSAAVHALLDGRQTVLLRKGGIGEKRFEVAAHEFLLFPTVAHSHAERV CCCEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC RPEHRDLLGPAAADSTDECVLLRAAAKVVAALPVNRPEGLDAIEDLHIWTAESVRADRLD CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHEECCCCCCHHCCC FRPKHKLAVLVVSAIPLAEPVRLARRPEYGGCTSWVQLPVTPTLAAPVHDEAALAEVAAR CCCCCHHEEEEEHHCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH VREAVG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA