Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148824012

Identifier: 148824012

GI number: 148824012

Start: 3140973

End: 3143411

Strand: Reverse

Name: 148824012

Synonym: TBFG_12837

Alternate gene names: NA

Gene position: 3143411-3140973 (Counterclockwise)

Preceding gene: 148824013

Following gene: 148824011

Centisome position: 71.05

GC content: 61.46

Gene sequence:

>2439_bases
ATGAACCCGCAACTCATCGAGGCCATAATCGGCTGCCTCTTGCACGACATTGGCAAACCGGTCCAGCGCGCGGCGCTCGG
CTACCCGGGCAGGCACAGTGCGATTGGCCGCGCTTTTATGAAGAAGGTGTGGTTGCGCGACAGCCGCAATCCGTCGCAGT
TCACCGACGAGGTGGATGAGGCTGACATTGGGGTCTCCGACCGCCGCATTCTCGACGCGATCAGCTATCACCACAGTTCT
GCGCTGCGTACGGCGGCCGAGAATGGCCGCCTTGCCGCCGATGCGCCGGCCTACATCGCCTACATCGCCGACAATATCGC
GGCCGGAACCGACCGCCGCAAGGCCGACTCCGACGACGGCCATGGTGCGAGCACTTGGGATCCGGACACGCCCCTGTATT
CGATGTTCAACCGATTCGGCTCCGGCACAGCGAATCTGGCATTTGCCCCGGAGATGCTCGACGACCGCAAGCCGATCAAT
ATACCGTCGCCACGCCGGATCGAATTCGACAAGGACCGCTACGCCGCCATCGTCAACAAACTTAAAGCCATTCTGGTCGA
CCTCGAACGTTCCGACACCTACCTCGCCAGCCTCCTCAACGTCCTCGAGGCGACGCTGTCGTTCGTGCCGTCCTCGACCG
ACGCGTCCGAGGTCGTCGACGTCTCACTCTTCGACCACCTGAAGCTGACGGGTGCGCTCGGCGCCTGCATCTGGCACTAC
CTACAAGCCACCGGACAAAGCGACTTCAAGTCAGCGCTGTTCGACAAGCAGGACACCTTCTACAACGAAAAAGCCTTCCT
GCTCACAACTTTCGACGTCTCAGGCATCCAGGACTTCATCTACACGATCCATTCCTCGGGTGCCGCGAAGATGCTGCGTG
CCCGCAGCTTCTACCTGGAGATGCTGACCGAGCATCTCATCGACGAGCTACTTGCGCGGGTGGGTCTCAGCCGCGCGAAT
CTCAACTACTCCGGCGGCGGGCACGCGTACCTGCTGCTGCCCAACACGGAGTCCGCGCGGAAATCCGTCGAACAGTTCGA
GCGTGAGGCCAACGACTGGCTGCTGGAAAACTTCGCAACCCGGCTCTTCATCGCCACGGGTAGCGTACCGCTTGCCGCGA
ACGACCTGATGCGTCGGCCGAACGAGAGTGCGAGCCAGGCAAGTAACCGCGCCCTCCGCTACAGCGGGCTCTACCGTGAG
TTGAGCGAGCAACTTTCCGCGAAGAAGCTCGCCCGATACAGCGCTGACCAACTGCGGGAACTCAACTCGCGCGATCACGA
CGGTCAGAAAGGTGACCGGGAATGCAGCGTGTGCCACACGGTCAACCGCACGGTCAGCGCCGACGACGAGCCAAAGTGCA
GCCTGTGCCAAGCGCTGACCGCTGCGTCTTCGCAGATTCAATCCGAGTCTCGCCGCTTCCTACTCATCTCTGACGGCGCC
ACCAAAGGTCTGCCCCTGCCGTTCGGCGCCACACTCACGTTCTGTAGCCGAGCCGACGCCGATAAGGCACTCCAGCAACC
CCAAACCCGAAGGCGGTACGCGAAGAACAAGTTCTTCGCCGGCGAGTGTTTGGGCACCGGGCTCTGGGTGGGCGACTACG
TCGCACAGATGGAGTTCGGTGACTACGTGAAGCGTGCGAGCGGAATCGCGCGCCTCGGGGTTCTGCGCCTTGACGTCGAT
AACCTGGGCCAGGCATTCACGCACGGCTTCATGGAGCAAGGCAACGGCAAGTTCAACACGATTAGCCGCACGGCCGCGTT
CTCCCGGATGCTGTCGTTGTTCTTCCGGCAGCACATCAACTACGTGTTGGCACGCCCGAAACTGCGCCCGATCACCGGCG
ATGACCCGGCGCGGCCCCGCGAGGCCACGATCATCTACTCCGGTGGCGATGACGTCTTCGTCGTGGGCGCGTGGGACGAC
GTCATCGAGTTCGGGATCGAGCTTCGGGAGCGGTTCCACGAATTCACCCAGGGCAAACTCACCGTGTCGGCTGGCATCGG
CATGTTCCCCGACAAGTACCCCATCTCCGTGATGGCCCGCGAAGTCGGAGATCTCGAAGACGCGGCGAAGTCGCTGCCCG
GCAAGAACGGGGTTGCACTCTTCGATCGCGAGTTCACCTTCGGCTGGGATGAGCTGCTCAGCAAGGTGATCGAGGAGAAG
TACCGGCACATCGCCGACTATTTCAGTGGCAACGAAGAACGCGGCATGGCCTTCATCTACAAGCTGCTCGAACTACTCGC
CGAACGCGACGATCGAATCACAAAGGCCAGATGGGTGTACTTCCTCACGCGCATGCGTAACCCCACCGGTGACACAGCGC
CTTTTCAGCAGTTTGCTAACCGGCTACACCAATGGTTCCAAGATCCGACAGACGCCAAGCAACTCAAGACCGCGCTGCAC
CTCTACATCTATCGCACTCGCAAGGAGGAGTCCGAATGA

Upstream 100 bases:

>100_bases
GGTTCGGGGAGTTCTCGGGATGCGGAATAAAGGCATCCATGGGGATGGGCGCGATCCGGGTCCAGCCACTGGCACCGAGG
GAAAAATGCGTACCGAAGCC

Downstream 100 bases:

>100_bases
GCGTCATCCAAGACGACTATGTGAAACAGGCCGAAGTAATTCGCGGCCTGCCAAAGAAAAAGAACGGCTTCGAGCTGACC
ACAACCCAGCTGCGGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 812

Protein sequence:

>812_residues
MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDEADIGVSDRRILDAISYHHSS
ALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDGHGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPIN
IPSPRRIEFDKDRYAAIVNKLKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY
LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLTEHLIDELLARVGLSRAN
LNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFATRLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRE
LSEQLSAKKLARYSADQLRELNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA
TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFGDYVKRASGIARLGVLRLDVD
NLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHINYVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDD
VIEFGIELRERFHEFTQGKLTVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK
YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFANRLHQWFQDPTDAKQLKTALH
LYIYRTRKEESE

Sequences:

>Translated_812_residues
MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDEADIGVSDRRILDAISYHHSS
ALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDGHGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPIN
IPSPRRIEFDKDRYAAIVNKLKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY
LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLTEHLIDELLARVGLSRAN
LNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFATRLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRE
LSEQLSAKKLARYSADQLRELNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA
TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFGDYVKRASGIARLGVLRLDVD
NLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHINYVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDD
VIEFGIELRERFHEFTQGKLTVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK
YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFANRLHQWFQDPTDAKQLKTALH
LYIYRTRKEESE
>Mature_812_residues
MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDEADIGVSDRRILDAISYHHSS
ALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDGHGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPIN
IPSPRRIEFDKDRYAAIVNKLKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY
LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLEMLTEHLIDELLARVGLSRAN
LNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFATRLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRE
LSEQLSAKKLARYSADQLRELNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA
TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFGDYVKRASGIARLGVLRLDVD
NLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHINYVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDD
VIEFGIELRERFHEFTQGKLTVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK
YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFANRLHQWFQDPTDAKQLKTALH
LYIYRTRKEESE

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013408
- InterPro:   IPR000160 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91048; Mature: 91048

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDE
CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ADIGVSDRRILDAISYHHSSALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
HGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPINIPSPRRIEFDKDRYAAIVNK
CCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
LKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLE
HHHCCCHHHHHHHHCCHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MLTEHLIDELLARVGLSRANLNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFAT
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
RLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRELSEQLSAKKLARYSADQLRE
EEEEEECCCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA
HCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFG
CCCCCCCCCHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHH
DYVKRASGIARLGVLRLDVDNLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHIN
HHHHHHCCHHHHHEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDDVIEFGIELRERFHEFTQGKL
HHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCE
TVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK
EEECCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH
YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFAN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RLHQWFQDPTDAKQLKTALHLYIYRTRKEESE
HHHHHHCCCCHHHHHHHHHHHHHHECCCCCCC
>Mature Secondary Structure
MNPQLIEAIIGCLLHDIGKPVQRAALGYPGRHSAIGRAFMKKVWLRDSRNPSQFTDEVDE
CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ADIGVSDRRILDAISYHHSSALRTAAENGRLAADAPAYIAYIADNIAAGTDRRKADSDDG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCCCCCCCCCCC
HGASTWDPDTPLYSMFNRFGSGTANLAFAPEMLDDRKPINIPSPRRIEFDKDRYAAIVNK
CCCCCCCCCCHHHHHHHHHCCCCCCEEECHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
LKAILVDLERSDTYLASLLNVLEATLSFVPSSTDASEVVDVSLFDHLKLTGALGACIWHY
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LQATGQSDFKSALFDKQDTFYNEKAFLLTTFDVSGIQDFIYTIHSSGAAKMLRARSFYLE
HHHCCCHHHHHHHHCCHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
MLTEHLIDELLARVGLSRANLNYSGGGHAYLLLPNTESARKSVEQFEREANDWLLENFAT
HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
RLFIATGSVPLAANDLMRRPNESASQASNRALRYSGLYRELSEQLSAKKLARYSADQLRE
EEEEEECCCCCCHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LNSRDHDGQKGDRECSVCHTVNRTVSADDEPKCSLCQALTAASSQIQSESRRFLLISDGA
HCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC
TKGLPLPFGATLTFCSRADADKALQQPQTRRRYAKNKFFAGECLGTGLWVGDYVAQMEFG
CCCCCCCCCHHHHHHHHCCHHHHHHCCHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHH
DYVKRASGIARLGVLRLDVDNLGQAFTHGFMEQGNGKFNTISRTAAFSRMLSLFFRQHIN
HHHHHHCCHHHHHEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YVLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDDVIEFGIELRERFHEFTQGKL
HHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCE
TVSAGIGMFPDKYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEK
EEECCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH
YRHIADYFSGNEERGMAFIYKLLELLAERDDRITKARWVYFLTRMRNPTGDTAPFQQFAN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RLHQWFQDPTDAKQLKTALHLYIYRTRKEESE
HHHHHHCCCCHHHHHHHHHHHHHHECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]