| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is ycbL [C]
Identifier: 148823777
GI number: 148823777
Start: 2919406
End: 2920146
Strand: Reverse
Name: ycbL [C]
Synonym: TBFG_12601
Alternate gene names: 148823777
Gene position: 2920146-2919406 (Counterclockwise)
Preceding gene: 148823778
Following gene: 148823775
Centisome position: 66.0
GC content: 65.18
Gene sequence:
>741_bases GTGTCAAGTGGCCCATGTTCGCGGCCCGCCTCGTCCCCGGACGCCGGGGATGGGAAACTGGGAACCGTGTTGATCACCGG ATTTCCTGCGGGGTTGCTGGCGTGTAACTGTTATGTGCTGGCCGAGCGGCCCGGAACCGACGCCGTCATCGTCGATCCGG GCCAGGGTGCGATGGGCACGCTGCGTCGCATCCTCGACAAGAACCGGCTGACCCCTGCCGCGGTGCTGCTCACCCACGGA CACATCGATCACATCTGGTCCGCGCAGAAGGTCTCAGACACCTTCGGCTGCCCCACCTATGTGCATCCCGCCGACCGGTT CATGCTGACCGACCCCATCTACGGCCTGGGCCCGCGGATAGCGCAGCTGGTTGCGGGTGCGTTCTTTCGTGAGCCTAAAC AGGTTGTGGAGCTGGACCGAGACGGCGACAAGATCGACCTCGGCGGCATCTCGGTCAACATCGATCACACACCGGGTCAC ACCCGCGGGTCGGTGGTCTTCCGGGTCCTGCAGGCGACCAACAACGACAAGGACATCGTGTTCACCGGTGACACCCTGTT CGAGCGTGCGATAGGCCGCACCGACTTGGCCGGCGGCAGCGGCCGCGACCTGTTGCGCTCCATCGTCGACAAACTCCTGG TGCTCGACGACAGCACGGTGGTGCTGCCCGGGCACGGCAACTCCACCACCATTGGGGCCGAGCGGCGCTTCAATCCGTTC CTTGAGGGCTTGAGCCGGTGA
Upstream 100 bases:
>100_bases GCGCGGCGCTCTAGTTGTCGTTCGAGTTTGCGTTTGGCTGTGGCACGTCGCTGAGCATTGGTCGGCACGAAAGCACAGGC TAATCGGGGCGCCGCGACCG
Downstream 100 bases:
>100_bases CGGAATTCTCGTCATTTTCGGCCCCCAAGGGGGTACCGGACTACGTCCCGCCCGACTCGGCGCAGTTCGTCGCGGTGCGC GACGGGCTGCTCGCGGCGGC
Product: glyoxalase II (hydroxyacylglutathione hydrolase)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGTLRRILDKNRLTPAAVLLTHG HIDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRIAQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGH TRGSVVFRVLQATNNDKDIVFTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPF LEGLSR
Sequences:
>Translated_246_residues MSSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGTLRRILDKNRLTPAAVLLTHG HIDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRIAQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGH TRGSVVFRVLQATNNDKDIVFTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPF LEGLSR >Mature_245_residues SSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGTLRRILDKNRLTPAAVLLTHGH IDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRIAQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGHT RGSVVFRVLQATNNDKDIVFTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPFL EGLSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Escherichia coli, GI1787158, Length=218, Percent_Identity=34.4036697247706, Blast_Score=115, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17538952, Length=151, Percent_Identity=31.7880794701987, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI221330176, Length=211, Percent_Identity=27.0142180094787, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24667703, Length=188, Percent_Identity=26.063829787234, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24667711, Length=240, Percent_Identity=23.3333333333333, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI21356335, Length=188, Percent_Identity=26.063829787234, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 26226; Mature: 26095
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGT CCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEEEEEECCCCCEEEECCCCCHHHH LRRILDKNRLTPAAVLLTHGHIDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRI HHHHHHHCCCCCEEEEEECCCHHHHHCHHHHHHHCCCCCEECCCCCEEEECCCCCCCHHH AQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGHTRGSVVFRVLQATNNDKDIV HHHHHHHHHHCCHHHHHCCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE FTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPF EECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCCEECCHHCCCHH LEGLSR HHHHCC >Mature Secondary Structure SSGPCSRPASSPDAGDGKLGTVLITGFPAGLLACNCYVLAERPGTDAVIVDPGQGAMGT CCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEEEEEECCCCCEEEECCCCCHHHH LRRILDKNRLTPAAVLLTHGHIDHIWSAQKVSDTFGCPTYVHPADRFMLTDPIYGLGPRI HHHHHHHCCCCCEEEEEECCCHHHHHCHHHHHHHCCCCCEECCCCCEEEECCCCCCCHHH AQLVAGAFFREPKQVVELDRDGDKIDLGGISVNIDHTPGHTRGSVVFRVLQATNNDKDIV HHHHHHHHHHCCHHHHHCCCCCCEEEECEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEE FTGDTLFERAIGRTDLAGGSGRDLLRSIVDKLLVLDDSTVVLPGHGNSTTIGAERRFNPF EECHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCCEECCHHCCCHH LEGLSR HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]