| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148823763
Identifier: 148823763
GI number: 148823763
Start: 2905763
End: 2906788
Strand: Reverse
Name: 148823763
Synonym: TBFG_12588
Alternate gene names: NA
Gene position: 2906788-2905763 (Counterclockwise)
Preceding gene: 148823764
Following gene: 148823755
Centisome position: 65.7
GC content: 63.06
Gene sequence:
>1026_bases ATGCGTGACTTCCACTGTCCAAATTGCGGGCAGCGCCTGGCATTCGAGAACTCCGCCTGCCTGTCGTGCGGCAGCGCGCT GGGGTTTTCTCTTGGGCGGATGGCGCTGCTGGTCATCGCCGACGACGCCGATGTCCAACTCTGCGCCAATCTCCACCTCG CGCAATGCAATTGGCTGGTGCCCAGTGATCAGCTCGGCGGACTTTGCAGTTCTTGTGTGCTGACCATCGAGCGTCCCAGC GATACCAACACCGCCGGGCTGGCGGAGTTCGCCCGAGCCGAAGGTGCCAAGCGGCGGCTGATCGCCGAGCTACACGAGCT GAAGCTGCCGATCGTCGGCCGCGACCAGGATCCTGACCATGGGTTGGCCTTCCGGCTATTGTCCAGCGCGCACGAGAACG TGACCACCGGACACCAGAACGGAGTCATCACACTGGATCTCGCCGAAGGCGACGATGTGCATCGGGAGCAGCTGCGGGTC GAGATGGACGAGCCGTATCGGACCCTGCTTGGGCACTTCCGCCACGAGATCGGGCACTACTACTTCTATCGACTCATCGC CTCGTCAAGCGACTATCTGTCCCGGTTCAACGAGTTGTTCGGAGACCCGGACGCTGACTACTCCCAGGCGTTGGATCGGC ATTACCGTGGCGGCCCGCCGGAAGGTTGGCAGGACAGCTTTGTCTCGTCGTATGCGACCATGCACGCGAGTGAGGATTGG GCCGAGACGTTCGCTCATTACCTGCATATCCGCGACGCCCTGGACACCGCGGCCTGGTGCGGCCTGGCACCGGCGTCGGC AACCTTCGACCGGCCGGCGTTGGGCCCCAGCGCTTTTAATACCATCATCGACAAGTGGCTGCCGCTGTCGTGGTCGCTGA ACATGGTCAATCGCTCGATGGGCCACGACGACCTATACCCCTTTGTGCTGCCGGCCGCTGTGCTGGAGAAGATGCGGTTC ATCCACACCGTCGTCGACGAGGTGGCCCCGGATTTCGAGCCGGCTCACAGCCGTCGCACCGTTTAG
Upstream 100 bases:
>100_bases GCAGACGTGCCGCCGCTACGCGGCATCATCTACACCAACTCCGAGAACAGTGTGATCGACGTTTCTGTCGATGTCGTGCC CTTCGAAGGTGATGCGCTGC
Downstream 100 bases:
>100_bases GCCGGCATCACCCGCCGTTGGTCTGGACCCCACAGCGGTTGCATGCCGCCGGGCAACGCCAACTGAGTGGCGGTGAGGAC GTCGGCCACGTCACGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERPS DTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRV EMDEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRF IHTVVDEVAPDFEPAHSRRTV
Sequences:
>Translated_341_residues MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERPS DTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRV EMDEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRF IHTVVDEVAPDFEPAHSRRTV >Mature_341_residues MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLVPSDQLGGLCSSCVLTIERPS DTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDHGLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRV EMDEPYRTLLGHFRHEIGHYYFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSMGHDDLYPFVLPAAVLEKMRF IHTVVDEVAPDFEPAHSRRTV
Specific function: Unknown
COG id: COG4307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2568_MYCTU (P65009)
Other databases:
- EMBL: BX842580 - EMBL: AE000516 - PIR: G70723 - RefSeq: NP_217084.1 - RefSeq: NP_337143.1 - EnsemblBacteria: EBMYCT00000001297 - EnsemblBacteria: EBMYCT00000070275 - GeneID: 887249 - GeneID: 925663 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2644 - KEGG: mtu:Rv2568c - TIGR: MT2644 - TubercuList: Rv2568c - GeneTree: EBGT00050000017633 - HOGENOM: HBG299788 - OMA: FGDERQD - ProtClustDB: CLSK864027 - InterPro: IPR011201 - PIRSF: PIRSF012641
Pfam domain/function: PF10005 DUF2248
EC number: NA
Molecular weight: Translated: 38003; Mature: 38003
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHCCCHHHCCCCC PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH CCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW HHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHH AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHC GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRDFHCPNCGQRLAFENSACLSCGSALGFSLGRMALLVIADDADVQLCANLHLAQCNWLV CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHCCCHHHCCCCC PSDQLGGLCSSCVLTIERPSDTNTAGLAEFARAEGAKRRLIAELHELKLPIVGRDQDPDH CCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC GLAFRLLSSAHENVTTGHQNGVITLDLAEGDDVHREQLRVEMDEPYRTLLGHFRHEIGHY HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH YFYRLIASSSDYLSRFNELFGDPDADYSQALDRHYRGGPPEGWQDSFVSSYATMHASEDW HHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHH AETFAHYLHIRDALDTAAWCGLAPASATFDRPALGPSAFNTIIDKWLPLSWSLNMVNRSM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHC GHDDLYPFVLPAAVLEKMRFIHTVVDEVAPDFEPAHSRRTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036