Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is yoaV [H]

Identifier: 148654138

GI number: 148654138

Start: 2916510

End: 2917448

Strand: Direct

Name: yoaV [H]

Synonym: PsycPRwf_2341

Alternate gene names: 148654138

Gene position: 2916510-2917448 (Clockwise)

Preceding gene: 148654137

Following gene: 148654139

Centisome position: 97.9

GC content: 45.58

Gene sequence:

>939_bases
ATGGCCATAGGATTTTTTGTGAGCAAACGTGACCTCATAACCTTTATTACCCTGGCCTTCATGTGGTCGTTGTCTTTTAT
CTTTTACCGCATTGGGGTGCCTGAATTTGGCTCAGTTGCCTTTGCCAGTATTCGCTTGGAGCTGGCGGGGATAACCATGC
TTTTATTTGTGCTACTAAACCCAAAAAACCGTCAAGGCATTTTGGCTAACTGGAAGCTACTGACCATCATCGGCTTATGC
TCTACTGCCATTCCATTCGTGCTGTTCGGCTATGCCGCAAAATCGGTTAATGCCGGTGTACTGGCGGTATTAAACGCCTC
TGTCCCGATGATGAGTGGGGTAATGGCCAGCCTGTTCTTCAATGATAAACTGTCAAGAAAACAAATACTGGGACTTGTCA
TTGGGGTCATTGGCGTGTTTATTTTGATGAGTGAAAATTTCTTGGCGATGATGCACAGCAGTGGCGGCGATCATAGCAGC
TTACAATCCCAATTGTGGCCCATGGGCTTTGCGCTGTTTGCCTGTATTGGCTATGCCACCGGCGCCAACCTGACCCGCAA
CTATCTAGAGCACATCTCTCCCATCGCCATTACGGCCGGCACCTTGATTACGGCCAGTATTGTGATGCTACCGGTCGCTA
TTTATAATTTCCCCTATCATCACTCTATTAGCGCCAAAGCTTGGGGTTCGGTGATTTGTATTGGTATTTTATCCACTGCG
ATTGCACTGATATTTATGAATCAGTTGATCAAAAGTATTGGTCCAGTACGCGCCACCAGCATCACCTTGGTCATCCCCAT
TTTTGCCATTATTTTTGGCTATATATTACTCGGTGAATCACTTGATATCTTTGCCATTGTGGGCTCGGTGGTAATTTTAT
TCGGCACTTATCTGTCATTAAACCTATCTGTTAAAAAACTGGCCGAAACTCAAGTCTAA

Upstream 100 bases:

>100_bases
AGCCTGAATTTGGCTATATTTTGTTAATCCCATATCCATGACCCACAAGCCGGCCTATAATAGCAAGTTTTCTGCTGTTT
TATACAGCTGTCTAATTTAG

Downstream 100 bases:

>100_bases
ACACCTAAAAAAAGCGCCTGATTGCTCGCTCAAGGCGCTTTTTTTATGAGTATACTGTCAGGAGGTTATAGCACAGCTTT
TTGTCATGGCCATCTTTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAIGFFVSKRDLITFITLAFMWSLSFIFYRIGVPEFGSVAFASIRLELAGITMLLFVLLNPKNRQGILANWKLLTIIGLC
STAIPFVLFGYAAKSVNAGVLAVLNASVPMMSGVMASLFFNDKLSRKQILGLVIGVIGVFILMSENFLAMMHSSGGDHSS
LQSQLWPMGFALFACIGYATGANLTRNYLEHISPIAITAGTLITASIVMLPVAIYNFPYHHSISAKAWGSVICIGILSTA
IALIFMNQLIKSIGPVRATSITLVIPIFAIIFGYILLGESLDIFAIVGSVVILFGTYLSLNLSVKKLAETQV

Sequences:

>Translated_312_residues
MAIGFFVSKRDLITFITLAFMWSLSFIFYRIGVPEFGSVAFASIRLELAGITMLLFVLLNPKNRQGILANWKLLTIIGLC
STAIPFVLFGYAAKSVNAGVLAVLNASVPMMSGVMASLFFNDKLSRKQILGLVIGVIGVFILMSENFLAMMHSSGGDHSS
LQSQLWPMGFALFACIGYATGANLTRNYLEHISPIAITAGTLITASIVMLPVAIYNFPYHHSISAKAWGSVICIGILSTA
IALIFMNQLIKSIGPVRATSITLVIPIFAIIFGYILLGESLDIFAIVGSVVILFGTYLSLNLSVKKLAETQV
>Mature_311_residues
AIGFFVSKRDLITFITLAFMWSLSFIFYRIGVPEFGSVAFASIRLELAGITMLLFVLLNPKNRQGILANWKLLTIIGLCS
TAIPFVLFGYAAKSVNAGVLAVLNASVPMMSGVMASLFFNDKLSRKQILGLVIGVIGVFILMSENFLAMMHSSGGDHSSL
QSQLWPMGFALFACIGYATGANLTRNYLEHISPIAITAGTLITASIVMLPVAIYNFPYHHSISAKAWGSVICIGILSTAI
ALIFMNQLIKSIGPVRATSITLVIPIFAIIFGYILLGESLDIFAIVGSVVILFGTYLSLNLSVKKLAETQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI87082351, Length=296, Percent_Identity=24.6621621621622, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33676; Mature: 33545

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGFFVSKRDLITFITLAFMWSLSFIFYRIGVPEFGSVAFASIRLELAGITMLLFVLLN
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PKNRQGILANWKLLTIIGLCSTAIPFVLFGYAAKSVNAGVLAVLNASVPMMSGVMASLFF
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH
NDKLSRKQILGLVIGVIGVFILMSENFLAMMHSSGGDHSSLQSQLWPMGFALFACIGYAT
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GANLTRNYLEHISPIAITAGTLITASIVMLPVAIYNFPYHHSISAKAWGSVICIGILSTA
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
IALIFMNQLIKSIGPVRATSITLVIPIFAIIFGYILLGESLDIFAIVGSVVILFGTYLSL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
NLSVKKLAETQV
CHHHHHHHHCCC
>Mature Secondary Structure 
AIGFFVSKRDLITFITLAFMWSLSFIFYRIGVPEFGSVAFASIRLELAGITMLLFVLLN
EEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PKNRQGILANWKLLTIIGLCSTAIPFVLFGYAAKSVNAGVLAVLNASVPMMSGVMASLFF
CCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHH
NDKLSRKQILGLVIGVIGVFILMSENFLAMMHSSGGDHSSLQSQLWPMGFALFACIGYAT
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
GANLTRNYLEHISPIAITAGTLITASIVMLPVAIYNFPYHHSISAKAWGSVICIGILSTA
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
IALIFMNQLIKSIGPVRATSITLVIPIFAIIFGYILLGESLDIFAIVGSVVILFGTYLSL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
NLSVKKLAETQV
CHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]