| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653666
Identifier: 148653666
GI number: 148653666
Start: 2326095
End: 2326535
Strand: Direct
Name: 148653666
Synonym: PsycPRwf_1869
Alternate gene names: NA
Gene position: 2326095-2326535 (Clockwise)
Preceding gene: 148653665
Following gene: 148653667
Centisome position: 78.08
GC content: 47.85
Gene sequence:
>441_bases ATGCCCTCTGCTGTCAAAAAAACACTGCCCTTGCCTGTGGCAATCTTACTCACCTTAGCGGTTGTCATTAGTATTCGAGA AGGCTCAGTATGGGTCTGTCAAATGTTAGGCTATCCCAGTGCAGCGAATATTGTGGGGCTGATTACTTTATTTTTGCTGC TAATGCTGTGGCGTTTTACTCGGGGGCTACCTGAGTGGCTTACTCCGGCCAGCAATACATTGTTGGTGGATAGTGGGTTT GCTTTTTTGCCAGTATCGGCTGGCGCTGGTCTGTTAATGTTTGGGCTTGGTGATGAGCTTTTGGGTATTATAGTGACCAT GGTAGTGAGCACCTTACTGCCATTGTGGGGCTTGGCACGACTCGCCAACTATTGGTTAAGCCGTCAGCCTGAGGGCTCTA ATGAGAGCGATACCAACACCTCTTCTACTCAATCAAAATAA
Upstream 100 bases:
>100_bases ATCAGGATATTACGCCTTGCCAAAAATTTATAGTTGCGCCTGTATCTTGCTTATGTAAGCTTGCTCTACATTAGGCCATA GCCAAAATAAAGGATGAGCC
Downstream 100 bases:
>100_bases GGCCTCAAGCTATGACTTTACTCAATCAAATGCCTGAAGGCACCACGTTGTTGACTGTACTTGCCGCTTTTGTTCTCACT TTAGTGGCACATGTGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPSAVKKTLPLPVAILLTLAVVISIREGSVWVCQMLGYPSAANIVGLITLFLLLMLWRFTRGLPEWLTPASNTLLVDSGF AFLPVSAGAGLLMFGLGDELLGIIVTMVVSTLLPLWGLARLANYWLSRQPEGSNESDTNTSSTQSK
Sequences:
>Translated_146_residues MPSAVKKTLPLPVAILLTLAVVISIREGSVWVCQMLGYPSAANIVGLITLFLLLMLWRFTRGLPEWLTPASNTLLVDSGF AFLPVSAGAGLLMFGLGDELLGIIVTMVVSTLLPLWGLARLANYWLSRQPEGSNESDTNTSSTQSK >Mature_145_residues PSAVKKTLPLPVAILLTLAVVISIREGSVWVCQMLGYPSAANIVGLITLFLLLMLWRFTRGLPEWLTPASNTLLVDSGFA FLPVSAGAGLLMFGLGDELLGIIVTMVVSTLLPLWGLARLANYWLSRQPEGSNESDTNTSSTQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15704; Mature: 15573
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAVKKTLPLPVAILLTLAVVISIREGSVWVCQMLGYPSAANIVGLITLFLLLMLWRFT CCCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHH RGLPEWLTPASNTLLVDSGFAFLPVSAGAGLLMFGLGDELLGIIVTMVVSTLLPLWGLAR CCCHHHCCCCCCEEEEECCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LANYWLSRQPEGSNESDTNTSSTQSK HHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSAVKKTLPLPVAILLTLAVVISIREGSVWVCQMLGYPSAANIVGLITLFLLLMLWRFT CCCHHHHCCCHHHHHHHHHHHHHCCCCCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHH RGLPEWLTPASNTLLVDSGFAFLPVSAGAGLLMFGLGDELLGIIVTMVVSTLLPLWGLAR CCCHHHCCCCCCEEEEECCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH LANYWLSRQPEGSNESDTNTSSTQSK HHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA