| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653622
Identifier: 148653622
GI number: 148653622
Start: 2266858
End: 2268249
Strand: Direct
Name: 148653622
Synonym: PsycPRwf_1825
Alternate gene names: NA
Gene position: 2266858-2268249 (Clockwise)
Preceding gene: 148653621
Following gene: 148653623
Centisome position: 76.1
GC content: 47.27
Gene sequence:
>1392_bases ATGACCAGTCAAAGCGAGAACCCCGTCAAACAAGATACCCTACCAGAGAGCTATGATCGTGCTGAAGATAAGCTGATTTA TCTACAGAGGCTGGTGGCAGACAAAGATTTGTCTACCATGGCTGAGTTCTTAAACGACCAGTCTGAGTATGAAATTGCCA GTCTATTAGAATCCTTCCCTCACGACTCGCGCCAATTGATTTGGGAGCAAGTGCCTGTTGATCTTAAAGGCCAGGTACTG GCTGAAGTGGTCGATGACATTCGCCCCTCCTTGATGGAAAACATGCAAGCAGAAGAAATTGAGACGCTTGCTGAAGATCT AGATGCTCAAGACATTGCTGAGATTCTAGATACCGTTGATGACAAGGTGCGCTCGGAGGTGATGTCTAATCTTGATGAAG AAATTCGCCAGCAAGTCAGCCAGCTAAATACCTATGAAGAGTATGAAGTCGGTGACTATATGGACCCCGACACCATTCAG ATTCAAGGCAATATTACGCTTGAGGAAGTCCAAAACTGGCTGCGTCAAGATGAGGATCTGCTCGATGATGAAACCCAAGA ACTTATCGTGGTCGATGCCAGCCATCAGTTGTTAGGCTTATTAAGCTTGGTGGATTTAATTAAATATCCGCAGCAATCTT TAGTTGAGCAGTGGATTGATCCAGCCATCACCATCAATGACCGAATGGACATTCAAGATGCTGCTGCAGTATTTCGCTCC TCAGATATCCGCTATGCACCCGTGGTTAATAGCTTTGGTGAATTGGTCGGTCAGCTTAATGCCGAGGACATCATGGAGAT TATTCAAGATGATGTCGACAGCACCATGAAGCACTTAGCGGGTGTGAGTGATGACGAAGAGCTGTTTGCCCCTATTTTGC GTAGTGCCAAAAGCCGTAGCGTTTGGTTGGGGATTAACTTATTAACTGCGCTGCTTGCTGCTGCGGTGATCGGGCAATTT GAAGAAGTATTGGCGCAAGTCGTTGCTTTGGCGGTATTGATGCCGGTAGTGGCCAGTATGGGCGGGATCTCTGGTAGCCA AACCCTCACTGTGGTTATCCGTGGCCTAGCCATGGGCCAAATCGGGGGCTCAAACCGCTTATGGCTAATGAATAAAGAGC TGTGGGTGGGCGCTATTAACGGGGTGATTTGGGCGGTGATTATGGCCGCTATCGCTCAGCTTTGGTTCCATGACCCTAAG ATTAGCTTGGTTATCGGCTGCGCCATTGCCATTAATATGACTGCTGCCAATGTAGCAGGGATTGGCATTCCACTATTTTT AAAGCGCTTAGATATTGACCCTGCGCTCTCAGCCTCAGTTATCTTAACCACAGTCACTGACATTGTCGGCTTTATGTCGT TCTTAGGACTGGCCAGCTTGCTTATTTTATAA
Upstream 100 bases:
>100_bases TTTAACAGGCTTATCCTATATAGATACTTTGTCTTTATAAAGCCCAATAAAAACGGTATACCATCCCTCTCCCACCTCAT CAAGCAATCTAAGGGCACCT
Downstream 100 bases:
>100_bases GCCAACTGCCTTTTTAAGCTCTGCCATATTATACGCCCATTCATATCAGGCCAAGCCCCTCTATGTTAGGGTTGCTTTTT TGTGTCTATAGATTAGACTA
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 462
Protein sequence:
>463_residues MTSQSENPVKQDTLPESYDRAEDKLIYLQRLVADKDLSTMAEFLNDQSEYEIASLLESFPHDSRQLIWEQVPVDLKGQVL AEVVDDIRPSLMENMQAEEIETLAEDLDAQDIAEILDTVDDKVRSEVMSNLDEEIRQQVSQLNTYEEYEVGDYMDPDTIQ IQGNITLEEVQNWLRQDEDLLDDETQELIVVDASHQLLGLLSLVDLIKYPQQSLVEQWIDPAITINDRMDIQDAAAVFRS SDIRYAPVVNSFGELVGQLNAEDIMEIIQDDVDSTMKHLAGVSDDEELFAPILRSAKSRSVWLGINLLTALLAAAVIGQF EEVLAQVVALAVLMPVVASMGGISGSQTLTVVIRGLAMGQIGGSNRLWLMNKELWVGAINGVIWAVIMAAIAQLWFHDPK ISLVIGCAIAINMTAANVAGIGIPLFLKRLDIDPALSASVILTTVTDIVGFMSFLGLASLLIL
Sequences:
>Translated_463_residues MTSQSENPVKQDTLPESYDRAEDKLIYLQRLVADKDLSTMAEFLNDQSEYEIASLLESFPHDSRQLIWEQVPVDLKGQVL AEVVDDIRPSLMENMQAEEIETLAEDLDAQDIAEILDTVDDKVRSEVMSNLDEEIRQQVSQLNTYEEYEVGDYMDPDTIQ IQGNITLEEVQNWLRQDEDLLDDETQELIVVDASHQLLGLLSLVDLIKYPQQSLVEQWIDPAITINDRMDIQDAAAVFRS SDIRYAPVVNSFGELVGQLNAEDIMEIIQDDVDSTMKHLAGVSDDEELFAPILRSAKSRSVWLGINLLTALLAAAVIGQF EEVLAQVVALAVLMPVVASMGGISGSQTLTVVIRGLAMGQIGGSNRLWLMNKELWVGAINGVIWAVIMAAIAQLWFHDPK ISLVIGCAIAINMTAANVAGIGIPLFLKRLDIDPALSASVILTTVTDIVGFMSFLGLASLLIL >Mature_462_residues TSQSENPVKQDTLPESYDRAEDKLIYLQRLVADKDLSTMAEFLNDQSEYEIASLLESFPHDSRQLIWEQVPVDLKGQVLA EVVDDIRPSLMENMQAEEIETLAEDLDAQDIAEILDTVDDKVRSEVMSNLDEEIRQQVSQLNTYEEYEVGDYMDPDTIQI QGNITLEEVQNWLRQDEDLLDDETQELIVVDASHQLLGLLSLVDLIKYPQQSLVEQWIDPAITINDRMDIQDAAAVFRSS DIRYAPVVNSFGELVGQLNAEDIMEIIQDDVDSTMKHLAGVSDDEELFAPILRSAKSRSVWLGINLLTALLAAAVIGQFE EVLAQVVALAVLMPVVASMGGISGSQTLTVVIRGLAMGQIGGSNRLWLMNKELWVGAINGVIWAVIMAAIAQLWFHDPKI SLVIGCAIAINMTAANVAGIGIPLFLKRLDIDPALSASVILTTVTDIVGFMSFLGLASLLIL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 51141; Mature: 51010
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQSENPVKQDTLPESYDRAEDKLIYLQRLVADKDLSTMAEFLNDQSEYEIASLLESFP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCC HDSRQLIWEQVPVDLKGQVLAEVVDDIRPSLMENMQAEEIETLAEDLDAQDIAEILDTVD CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH DKVRSEVMSNLDEEIRQQVSQLNTYEEYEVGDYMDPDTIQIQGNITLEEVQNWLRQDEDL HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEECCCCHHHHHHHHHCCHHH LDDETQELIVVDASHQLLGLLSLVDLIKYPQQSLVEQWIDPAITINDRMDIQDAAAVFRS CCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHC SDIRYAPVVNSFGELVGQLNAEDIMEIIQDDVDSTMKHLAGVSDDEELFAPILRSAKSRS CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCE VWLGINLLTALLAAAVIGQFEEVLAQVVALAVLMPVVASMGGISGSQTLTVVIRGLAMGQ EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC IGGSNRLWLMNKELWVGAINGVIWAVIMAAIAQLWFHDPKISLVIGCAIAINMTAANVAG CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHH IGIPLFLKRLDIDPALSASVILTTVTDIVGFMSFLGLASLLIL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TSQSENPVKQDTLPESYDRAEDKLIYLQRLVADKDLSTMAEFLNDQSEYEIASLLESFP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCC HDSRQLIWEQVPVDLKGQVLAEVVDDIRPSLMENMQAEEIETLAEDLDAQDIAEILDTVD CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH DKVRSEVMSNLDEEIRQQVSQLNTYEEYEVGDYMDPDTIQIQGNITLEEVQNWLRQDEDL HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEECCCCHHHHHHHHHCCHHH LDDETQELIVVDASHQLLGLLSLVDLIKYPQQSLVEQWIDPAITINDRMDIQDAAAVFRS CCCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHC SDIRYAPVVNSFGELVGQLNAEDIMEIIQDDVDSTMKHLAGVSDDEELFAPILRSAKSRS CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCE VWLGINLLTALLAAAVIGQFEEVLAQVVALAVLMPVVASMGGISGSQTLTVVIRGLAMGQ EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHC IGGSNRLWLMNKELWVGAINGVIWAVIMAAIAQLWFHDPKISLVIGCAIAINMTAANVAG CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHH IGIPLFLKRLDIDPALSASVILTTVTDIVGFMSFLGLASLLIL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA