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The map label for this gene is yggB [C]

Identifier: 148653567

GI number: 148653567

Start: 2190510

End: 2191730

Strand: Direct

Name: yggB [C]

Synonym: PsycPRwf_1770

Alternate gene names: 148653567

Gene position: 2190510-2191730 (Clockwise)

Preceding gene: 148653566

Following gene: 148653568

Centisome position: 73.53

GC content: 48.24

Gene sequence:

>1221_bases
ATGGCAAAAGAGACCGGCTCGAAGATAGGTGCCTTTTTTCAAGACATCCTGCACGATTTATACTCAAGCTTGTATCTTGC
CATTGGTGGTAACTTAGAAGAAGAGAGTCGTGACTGGGCCTCACGCGGCGTAGAGCTTGCCAGCACTACCATAAAGATCA
TCATATTGCTGCTGATACTGTGGGCCTTGTACTGGTTTTTTACTTACTTAACCAACCGTTATAAAGACCGCTTTAAAATC
TCCGAGCGGCGTTTAAGCATTATCCGCTCGGTGATGCGCTATATCTGGGTAGTCAGCTGCGTCATTGCCATTATGAGCCA
AGTCAGCGTAGATCCCTCCACAGTCAGTGCCACCGCCAAAGCCAGTATCTGGGCAGGTATCTATTATGTACTCTGGGCCA
CCTCTGAGCAGGTGATTAGCCGAGTGCTGAAGCATTATGGGCTTAATGCCTCGATCGAACAGCTGCTAAAAAACGTATTT
TCAGTACTGATTATCGTCTTCGGTCTGGCCAGTGTCATGGCGCAATTTGGCTTTGATATTGTGTCCTTGGTCGCCGGTCT
GGGTATTTTGGGTTTGGCAGTGGGCTTTGCTGCGCAGTCAACCATAGCCAACTTCATCTCCGGCATCACCATTTTACTTG
AGCAGTCCTTTAAAGTTGGAGACTGGATTAGCATTGGCAATAATGAGGGCCGGGTTATTTTGATTTCACTGCGCACCACC
CACATCTTAACTCGAGACAATATCACCGTTATTATTCCCAATGCCACTGTGGCCTCATCAGAGGTCACCAACTTAACTTC
AAAGAACTTTATTCGCTTTGATATTCAGGTGCGGGTGGCATTAGAGTCCGATACCGAGCAGGCCCGTCAAGTGATTTTAA
AGGTTCTTGAGGACACAGATAATATTTTAAAACGCCCTGAGCCTTCAGCCACTGTCGATCATATCAGTGACTTTGGCATC
GTCTTTATCGTGCGCTTTTGGGTGACGCCCGCCGCTGTGGCACGTATGCCCAGAATGAAAGAGGCGCTGCATGAGGCGAT
AACAAACAGCTTGCAACAAGCCCAGATTAGCATCCCCTACCCGCACATGCGCGTCTTAATTGCCAAAGACATCAGCACAG
ACGCTGAGCTTGCCCGTCATATTGAGGCACCGCACACCCAAGCAAGCGCAGCTAATTTTACCCCTAAGGTCAAAAGCGAT
AACCAATCGCCGAAAACGTAA

Upstream 100 bases:

>100_bases
ATCGCAAGATGGTCTCAACTTATCTCATTTTGTTGTATATTACTACTTTAAAACCAAGAATCCTAACTGCTCCAAATACT
CATGATTTATAGGAAGTGCA

Downstream 100 bases:

>100_bases
GTCATTAAATGGGCCAAAACGTATTTAACTCAGTGAAATATCCTACCGTCCAAGGTTAGTGTGTTAAAATCACCGCTATT
GATAACTGGTTTATCCTCAC

Product: mechanosensitive ion channel MscS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MAKETGSKIGAFFQDILHDLYSSLYLAIGGNLEEESRDWASRGVELASTTIKIIILLLILWALYWFFTYLTNRYKDRFKI
SERRLSIIRSVMRYIWVVSCVIAIMSQVSVDPSTVSATAKASIWAGIYYVLWATSEQVISRVLKHYGLNASIEQLLKNVF
SVLIIVFGLASVMAQFGFDIVSLVAGLGILGLAVGFAAQSTIANFISGITILLEQSFKVGDWISIGNNEGRVILISLRTT
HILTRDNITVIIPNATVASSEVTNLTSKNFIRFDIQVRVALESDTEQARQVILKVLEDTDNILKRPEPSATVDHISDFGI
VFIVRFWVTPAAVARMPRMKEALHEAITNSLQQAQISIPYPHMRVLIAKDISTDAELARHIEAPHTQASAANFTPKVKSD
NQSPKT

Sequences:

>Translated_406_residues
MAKETGSKIGAFFQDILHDLYSSLYLAIGGNLEEESRDWASRGVELASTTIKIIILLLILWALYWFFTYLTNRYKDRFKI
SERRLSIIRSVMRYIWVVSCVIAIMSQVSVDPSTVSATAKASIWAGIYYVLWATSEQVISRVLKHYGLNASIEQLLKNVF
SVLIIVFGLASVMAQFGFDIVSLVAGLGILGLAVGFAAQSTIANFISGITILLEQSFKVGDWISIGNNEGRVILISLRTT
HILTRDNITVIIPNATVASSEVTNLTSKNFIRFDIQVRVALESDTEQARQVILKVLEDTDNILKRPEPSATVDHISDFGI
VFIVRFWVTPAAVARMPRMKEALHEAITNSLQQAQISIPYPHMRVLIAKDISTDAELARHIEAPHTQASAANFTPKVKSD
NQSPKT
>Mature_405_residues
AKETGSKIGAFFQDILHDLYSSLYLAIGGNLEEESRDWASRGVELASTTIKIIILLLILWALYWFFTYLTNRYKDRFKIS
ERRLSIIRSVMRYIWVVSCVIAIMSQVSVDPSTVSATAKASIWAGIYYVLWATSEQVISRVLKHYGLNASIEQLLKNVFS
VLIIVFGLASVMAQFGFDIVSLVAGLGILGLAVGFAAQSTIANFISGITILLEQSFKVGDWISIGNNEGRVILISLRTTH
ILTRDNITVIIPNATVASSEVTNLTSKNFIRFDIQVRVALESDTEQARQVILKVLEDTDNILKRPEPSATVDHISDFGIV
FIVRFWVTPAAVARMPRMKEALHEAITNSLQQAQISIPYPHMRVLIAKDISTDAELARHIEAPHTQASAANFTPKVKSDN
QSPKT

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1789291, Length=227, Percent_Identity=26.431718061674, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1786670, Length=186, Percent_Identity=29.5698924731183, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI2367355, Length=227, Percent_Identity=23.3480176211454, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1787591, Length=133, Percent_Identity=33.8345864661654, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 45133; Mature: 45002

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKETGSKIGAFFQDILHDLYSSLYLAIGGNLEEESRDWASRGVELASTTIKIIILLLIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
WALYWFFTYLTNRYKDRFKISERRLSIIRSVMRYIWVVSCVIAIMSQVSVDPSTVSATAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ASIWAGIYYVLWATSEQVISRVLKHYGLNASIEQLLKNVFSVLIIVFGLASVMAQFGFDI
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VSLVAGLGILGLAVGFAAQSTIANFISGITILLEQSFKVGDWISIGNNEGRVILISLRTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEE
HILTRDNITVIIPNATVASSEVTNLTSKNFIRFDIQVRVALESDTEQARQVILKVLEDTD
EEEEECCEEEEECCCCCCCHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCH
NILKRPEPSATVDHISDFGIVFIVRFWVTPAAVARMPRMKEALHEAITNSLQQAQISIPY
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHCEECCCC
PHMRVLIAKDISTDAELARHIEAPHTQASAANFTPKVKSDNQSPKT
CHHEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKETGSKIGAFFQDILHDLYSSLYLAIGGNLEEESRDWASRGVELASTTIKIIILLLIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
WALYWFFTYLTNRYKDRFKISERRLSIIRSVMRYIWVVSCVIAIMSQVSVDPSTVSATAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ASIWAGIYYVLWATSEQVISRVLKHYGLNASIEQLLKNVFSVLIIVFGLASVMAQFGFDI
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
VSLVAGLGILGLAVGFAAQSTIANFISGITILLEQSFKVGDWISIGNNEGRVILISLRTT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEEEE
HILTRDNITVIIPNATVASSEVTNLTSKNFIRFDIQVRVALESDTEQARQVILKVLEDTD
EEEEECCEEEEECCCCCCCHHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHCCH
NILKRPEPSATVDHISDFGIVFIVRFWVTPAAVARMPRMKEALHEAITNSLQQAQISIPY
HHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHCEECCCC
PHMRVLIAKDISTDAELARHIEAPHTQASAANFTPKVKSDNQSPKT
CHHEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]