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The map label for this gene is iscR [H]

Identifier: 148653426

GI number: 148653426

Start: 2014956

End: 2015477

Strand: Direct

Name: iscR [H]

Synonym: PsycPRwf_1628

Alternate gene names: 148653426

Gene position: 2014956-2015477 (Clockwise)

Preceding gene: 148653425

Following gene: 148653427

Centisome position: 67.64

GC content: 42.72

Gene sequence:

>522_bases
ATGCGTTTAACAACTCGAGGTAGATACGCCGTTACCGCGCTACTAGATCTGGCTATTCAAGATGGCGACTCAACAAATGC
TGTCTCTTTATCAGATATAGCAAAGCGCCAATCTATATCCATTTCTTATTTGGAGCAGTTATTCTCTAAGTTAAGAAAAG
CAGGATTAGTGACCAGTACTCGAGGCGCCTCTGGAGGCTATCATTTAGCAAAGCCATTGGCCGATATCGACGTAATGACC
ATCATTACCGCGGTAGATGAGTCTGTGAATGCCATGCAGTGTGGTGGCCAAGGCAACTGTCAGGGCGGCGCTATGTGTCT
CACCCATGATTTATGGTGTGCCTTATCTAAGCATATTGAACAGTATCTAAAAAACATCTCATTAGAACAATTACTACAGA
TGGAAAATGTAAAAGACGTCTCAGACCGTCAACAACTTATTTATGATGTGGCGACAGAAAGCACCACATCTCATTCAAAT
CCTAATATGATATTCTCAGCCAGTGAGGTTAATCCAGCATGA

Upstream 100 bases:

>100_bases
TTGCCTTACAAATTACTCACCGATTAATCTTGACTAGTTTACTCGGGATTAACTATAATAGGCATCATATCAACTTATAG
CGACATCGTGGAGGCATTGA

Downstream 100 bases:

>100_bases
GTAACTTGAACCGCCCTATCTATCTTGACTATGCAGCAACTACCCCTGTAGATCCGCAAGTGGCCAAAAAAATGACCGAG
TATATGACCTTTGATGGCAT

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MRLTTRGRYAVTALLDLAIQDGDSTNAVSLSDIAKRQSISISYLEQLFSKLRKAGLVTSTRGASGGYHLAKPLADIDVMT
IITAVDESVNAMQCGGQGNCQGGAMCLTHDLWCALSKHIEQYLKNISLEQLLQMENVKDVSDRQQLIYDVATESTTSHSN
PNMIFSASEVNPA

Sequences:

>Translated_173_residues
MRLTTRGRYAVTALLDLAIQDGDSTNAVSLSDIAKRQSISISYLEQLFSKLRKAGLVTSTRGASGGYHLAKPLADIDVMT
IITAVDESVNAMQCGGQGNCQGGAMCLTHDLWCALSKHIEQYLKNISLEQLLQMENVKDVSDRQQLIYDVATESTTSHSN
PNMIFSASEVNPA
>Mature_173_residues
MRLTTRGRYAVTALLDLAIQDGDSTNAVSLSDIAKRQSISISYLEQLFSKLRKAGLVTSTRGASGGYHLAKPLADIDVMT
IITAVDESVNAMQCGGQGNCQGGAMCLTHDLWCALSKHIEQYLKNISLEQLLQMENVKDVSDRQQLIYDVATESTTSHSN
PNMIFSASEVNPA

Specific function: Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins [H]

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=145, Percent_Identity=55.1724137931034, Blast_Score=137, Evalue=4e-34,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 18769; Mature: 18769

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00018 EF_HAND_1 ; PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTTRGRYAVTALLDLAIQDGDSTNAVSLSDIAKRQSISISYLEQLFSKLRKAGLVTST
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
RGASGGYHLAKPLADIDVMTIITAVDESVNAMQCGGQGNCQGGAMCLTHDLWCALSKHIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
QYLKNISLEQLLQMENVKDVSDRQQLIYDVATESTTSHSNPNMIFSASEVNPA
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MRLTTRGRYAVTALLDLAIQDGDSTNAVSLSDIAKRQSISISYLEQLFSKLRKAGLVTST
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
RGASGGYHLAKPLADIDVMTIITAVDESVNAMQCGGQGNCQGGAMCLTHDLWCALSKHIE
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
QYLKNISLEQLLQMENVKDVSDRQQLIYDVATESTTSHSNPNMIFSASEVNPA
HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]