| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148653425
Identifier: 148653425
GI number: 148653425
Start: 2013696
End: 2014340
Strand: Direct
Name: 148653425
Synonym: PsycPRwf_1627
Alternate gene names: NA
Gene position: 2013696-2014340 (Clockwise)
Preceding gene: 148653422
Following gene: 148653426
Centisome position: 67.6
GC content: 44.03
Gene sequence:
>645_bases ATGAGTCAAAATTCAATATCAAACTCTTTACTTAATGTCGTACTGGTACTGGCAGAGTCCGCCATTACTCTGGTATTAAG ATTCGACCCGAACCTACGCAAAGCTGTTTATCCTTTGGCTCAAAAAAACACTGTGGTGTGTGTGCGCAGCTATTTACCCC ACACCCAATTCTATGCCACCTTTACTACCAAAGGCGTTTTGTTAGATAGCAACCTACCCGCCTCTGTCTCAGAGCCAGAT GTGGTTATTAATGCCTACTCTCACCAACTGATCAATTCATTCATCAGCAATGATGCCACTCAAATCAATAAGCTGACTAT GCGCGGCGGTACTGAGACAGTGACCGAAGTACGTCACTTCCTATTACAACTGGGTGTGGCCAGCTTATTCCAAGGCATTA TTAAAACGGTGAAAGGCAAAGACAAGGGCCGCGGCAAAAAAGACGATGCGGACAATGCTAATAAGCCTGATTATAAAGCG CGCATTGAAGAGCAGCAGCAGCAGCTAAATATATTAAGCATGCGCAACCGCGAACTTGAAGTCAGCTTAAAAGAGGCTCA TAGCAAACAAAAAACCACATTAATTGCGTTAATTGTGGCGTCATTAATTGCAGTTGCTTCAGTCATTGGCTGGCTGACTC AATAG
Upstream 100 bases:
>100_bases AATTCCAAGTATTTTAATAGCGAGGGCTCTCCATAATAAGTACACTAGGGTTAACAGCTTAGATAAAGCGCTTACTTTTT AACACTTAAATAGGTTTAGT
Downstream 100 bases:
>100_bases TTGACTCATACCCAAGTCACCGCATTATCACTTATTGGTATATTAAAACCTTTAAATGTCTTCATTTAAGGGTTTTTTTT GGTGTATTTATAACCCATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYATFTTKGVLLDSNLPASVSEPD VVINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHFLLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKA RIEEQQQQLNILSMRNRELEVSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ
Sequences:
>Translated_214_residues MSQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYATFTTKGVLLDSNLPASVSEPD VVINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHFLLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKA RIEEQQQQLNILSMRNRELEVSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ >Mature_213_residues SQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYATFTTKGVLLDSNLPASVSEPDV VINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHFLLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKAR IEEQQQQLNILSMRNRELEVSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23636; Mature: 23504
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYAT CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCEEEEEHHHCCCCCEEEE FTTKGVLLDSNLPASVSEPDVVINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHF EEECCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH LLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKARIEEQQQQLNILSMRNRELE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHE VSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ EHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYAT CCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCEEEEEHHHCCCCCEEEE FTTKGVLLDSNLPASVSEPDVVINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHF EEECCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH LLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKARIEEQQQQLNILSMRNRELE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHE VSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ EHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA