Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

Click here to switch to the map view.

The map label for this gene is 148653425

Identifier: 148653425

GI number: 148653425

Start: 2013696

End: 2014340

Strand: Direct

Name: 148653425

Synonym: PsycPRwf_1627

Alternate gene names: NA

Gene position: 2013696-2014340 (Clockwise)

Preceding gene: 148653422

Following gene: 148653426

Centisome position: 67.6

GC content: 44.03

Gene sequence:

>645_bases
ATGAGTCAAAATTCAATATCAAACTCTTTACTTAATGTCGTACTGGTACTGGCAGAGTCCGCCATTACTCTGGTATTAAG
ATTCGACCCGAACCTACGCAAAGCTGTTTATCCTTTGGCTCAAAAAAACACTGTGGTGTGTGTGCGCAGCTATTTACCCC
ACACCCAATTCTATGCCACCTTTACTACCAAAGGCGTTTTGTTAGATAGCAACCTACCCGCCTCTGTCTCAGAGCCAGAT
GTGGTTATTAATGCCTACTCTCACCAACTGATCAATTCATTCATCAGCAATGATGCCACTCAAATCAATAAGCTGACTAT
GCGCGGCGGTACTGAGACAGTGACCGAAGTACGTCACTTCCTATTACAACTGGGTGTGGCCAGCTTATTCCAAGGCATTA
TTAAAACGGTGAAAGGCAAAGACAAGGGCCGCGGCAAAAAAGACGATGCGGACAATGCTAATAAGCCTGATTATAAAGCG
CGCATTGAAGAGCAGCAGCAGCAGCTAAATATATTAAGCATGCGCAACCGCGAACTTGAAGTCAGCTTAAAAGAGGCTCA
TAGCAAACAAAAAACCACATTAATTGCGTTAATTGTGGCGTCATTAATTGCAGTTGCTTCAGTCATTGGCTGGCTGACTC
AATAG

Upstream 100 bases:

>100_bases
AATTCCAAGTATTTTAATAGCGAGGGCTCTCCATAATAAGTACACTAGGGTTAACAGCTTAGATAAAGCGCTTACTTTTT
AACACTTAAATAGGTTTAGT

Downstream 100 bases:

>100_bases
TTGACTCATACCCAAGTCACCGCATTATCACTTATTGGTATATTAAAACCTTTAAATGTCTTCATTTAAGGGTTTTTTTT
GGTGTATTTATAACCCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYATFTTKGVLLDSNLPASVSEPD
VVINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHFLLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKA
RIEEQQQQLNILSMRNRELEVSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ

Sequences:

>Translated_214_residues
MSQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYATFTTKGVLLDSNLPASVSEPD
VVINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHFLLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKA
RIEEQQQQLNILSMRNRELEVSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ
>Mature_213_residues
SQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYATFTTKGVLLDSNLPASVSEPDV
VINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHFLLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKAR
IEEQQQQLNILSMRNRELEVSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23636; Mature: 23504

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYAT
CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCEEEEEHHHCCCCCEEEE
FTTKGVLLDSNLPASVSEPDVVINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHF
EEECCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
LLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKARIEEQQQQLNILSMRNRELE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHE
VSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ
EHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQNSISNSLLNVVLVLAESAITLVLRFDPNLRKAVYPLAQKNTVVCVRSYLPHTQFYAT
CCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCCEEEEEHHHCCCCCEEEE
FTTKGVLLDSNLPASVSEPDVVINAYSHQLINSFISNDATQINKLTMRGGTETVTEVRHF
EEECCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
LLQLGVASLFQGIIKTVKGKDKGRGKKDDADNANKPDYKARIEEQQQQLNILSMRNRELE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHE
VSLKEAHSKQKTTLIALIVASLIAVASVIGWLTQ
EHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA