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The map label for this gene is dppB [H]

Identifier: 148653325

GI number: 148653325

Start: 1867737

End: 1868753

Strand: Direct

Name: dppB [H]

Synonym: PsycPRwf_1527

Alternate gene names: 148653325

Gene position: 1867737-1868753 (Clockwise)

Preceding gene: 148653324

Following gene: 148653326

Centisome position: 62.7

GC content: 47.98

Gene sequence:

>1017_bases
ATGCTACTGTATATTCTTCGTCGAATTTCGATTCTTATCCCTGTGTATATTGGTCTGACCCTCTCCACCTTCACCCTCAT
TCGACTCGTCCCTGGCGATGCGGTAGAGATTATGATGGGGGAGCGTATGGTCGATCCGCAAATGCACGCCCAAGCACTTG
CCCGCTTAGGCCTAGATAAGCCCTTGCCTGTACAATATTGGGATTATATAACCAATATTTTACAAGGTGACTTTGGGGCT
TCTTTTCGTACCCGAACCCCAGTTTTACAAGACTTCTTCGCCCACTTCGTGCCCACGTTAGAGCTGGCACTTTGTGCCAT
TACTATCGCCAGCATTGTCGGCGTTAGCCTTGGCATATTAGCCGCCTTAAAGCGTGGCAGCTGGCTGGATTATACTCTGA
TGTCCGGCGCCCTAGCCGGCTACTCTATGCCCATTTACTTACTGGGCCCTATTTTAACCGGTATCTTTGCTCACTATTTG
GGTCTATTACCGGTGTCTGGTGTCATCTCTGTTGCTCAGTTTTTGGACGTCAAACCCTTATATGGCTCTTGGCTACTCGG
CTCCTTAACTTCAGGGATACCTGGCGCTTTTTGGAACGTAGTGAAGCACTTTATTTTACCCTCTATTGCGCTATCTACCA
TTCCTTTGGCAATGATTGCACGGATGACCCGTTCTGCCATGCTTGAGGTGTTGGATGAGGACTATGTGCGTACTGCCCGA
GCTAAAGGGTTATCACCTAAGCGGGTTATTCTAATTCATGTTATGCGCAACGCACTCATTACTGTGGTTACTGTAGTCGG
ACTACAAATGGCCACCTTATTAGCCGGTGCAATCATTACCGAAACTATCTTCAGCTGGCCAGGTGTCGGAAACTGGCTTC
TCGATGGGTTTTTCACGCGGGACTACCCTATTGTTCAAAATGGCATTTTATTGGTCGCGACGGCTCTGATCTTGGTCAGT
CTATTGGTCGATATCTTATACGGGCTAATCAATCCCCGTATCAGACATACCTCATAG

Upstream 100 bases:

>100_bases
AACTTAGTATTAGATGCCCTATTTGATACTTCAGACTCAGCCATCTCCTTTCATCCTAGTGTTATAGCAAACTCTTTGTT
TTAAAAAATCGAGCGCGCCC

Downstream 100 bases:

>100_bases
GCTATCTGTTATGCAGCCATTATTTATGAGCTTATTCGTCCTATATAACCAAAAAATTTTATTATCAAATCGCCTTAGAA
AAATAGGAAAATCCAAATGA

Product: nickel-transporting ATPase

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLLYILRRISILIPVYIGLTLSTFTLIRLVPGDAVEIMMGERMVDPQMHAQALARLGLDKPLPVQYWDYITNILQGDFGA
SFRTRTPVLQDFFAHFVPTLELALCAITIASIVGVSLGILAALKRGSWLDYTLMSGALAGYSMPIYLLGPILTGIFAHYL
GLLPVSGVISVAQFLDVKPLYGSWLLGSLTSGIPGAFWNVVKHFILPSIALSTIPLAMIARMTRSAMLEVLDEDYVRTAR
AKGLSPKRVILIHVMRNALITVVTVVGLQMATLLAGAIITETIFSWPGVGNWLLDGFFTRDYPIVQNGILLVATALILVS
LLVDILYGLINPRIRHTS

Sequences:

>Translated_338_residues
MLLYILRRISILIPVYIGLTLSTFTLIRLVPGDAVEIMMGERMVDPQMHAQALARLGLDKPLPVQYWDYITNILQGDFGA
SFRTRTPVLQDFFAHFVPTLELALCAITIASIVGVSLGILAALKRGSWLDYTLMSGALAGYSMPIYLLGPILTGIFAHYL
GLLPVSGVISVAQFLDVKPLYGSWLLGSLTSGIPGAFWNVVKHFILPSIALSTIPLAMIARMTRSAMLEVLDEDYVRTAR
AKGLSPKRVILIHVMRNALITVVTVVGLQMATLLAGAIITETIFSWPGVGNWLLDGFFTRDYPIVQNGILLVATALILVS
LLVDILYGLINPRIRHTS
>Mature_338_residues
MLLYILRRISILIPVYIGLTLSTFTLIRLVPGDAVEIMMGERMVDPQMHAQALARLGLDKPLPVQYWDYITNILQGDFGA
SFRTRTPVLQDFFAHFVPTLELALCAITIASIVGVSLGILAALKRGSWLDYTLMSGALAGYSMPIYLLGPILTGIFAHYL
GLLPVSGVISVAQFLDVKPLYGSWLLGSLTSGIPGAFWNVVKHFILPSIALSTIPLAMIARMTRSAMLEVLDEDYVRTAR
AKGLSPKRVILIHVMRNALITVVTVVGLQMATLLAGAIITETIFSWPGVGNWLLDGFFTRDYPIVQNGILLVATALILVS
LLVDILYGLINPRIRHTS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=339, Percent_Identity=55.7522123893805, Blast_Score=370, Evalue=1e-104,
Organism=Escherichia coli, GI1787053, Length=337, Percent_Identity=39.7626112759644, Blast_Score=240, Evalue=8e-65,
Organism=Escherichia coli, GI1787497, Length=339, Percent_Identity=35.9882005899705, Blast_Score=200, Evalue=9e-53,
Organism=Escherichia coli, GI1787761, Length=330, Percent_Identity=40.3030303030303, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1789888, Length=338, Percent_Identity=34.6153846153846, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1787550, Length=276, Percent_Identity=34.4202898550725, Blast_Score=164, Evalue=6e-42,
Organism=Escherichia coli, GI1788504, Length=298, Percent_Identity=29.5302013422819, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37004; Mature: 37004

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLYILRRISILIPVYIGLTLSTFTLIRLVPGDAVEIMMGERMVDPQMHAQALARLGLDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCC
PLPVQYWDYITNILQGDFGASFRTRTPVLQDFFAHFVPTLELALCAITIASIVGVSLGIL
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALKRGSWLDYTLMSGALAGYSMPIYLLGPILTGIFAHYLGLLPVSGVISVAQFLDVKPL
HHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YGSWLLGSLTSGIPGAFWNVVKHFILPSIALSTIPLAMIARMTRSAMLEVLDEDYVRTAR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKGLSPKRVILIHVMRNALITVVTVVGLQMATLLAGAIITETIFSWPGVGNWLLDGFFTR
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
DYPIVQNGILLVATALILVSLLVDILYGLINPRIRHTS
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLLYILRRISILIPVYIGLTLSTFTLIRLVPGDAVEIMMGERMVDPQMHAQALARLGLDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCC
PLPVQYWDYITNILQGDFGASFRTRTPVLQDFFAHFVPTLELALCAITIASIVGVSLGIL
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALKRGSWLDYTLMSGALAGYSMPIYLLGPILTGIFAHYLGLLPVSGVISVAQFLDVKPL
HHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YGSWLLGSLTSGIPGAFWNVVKHFILPSIALSTIPLAMIARMTRSAMLEVLDEDYVRTAR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKGLSPKRVILIHVMRNALITVVTVVGLQMATLLAGAIITETIFSWPGVGNWLLDGFFTR
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
DYPIVQNGILLVATALILVSLLVDILYGLINPRIRHTS
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]