| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652823
Identifier: 148652823
GI number: 148652823
Start: 1209526
End: 1210200
Strand: Direct
Name: 148652823
Synonym: PsycPRwf_1016
Alternate gene names: NA
Gene position: 1209526-1210200 (Clockwise)
Preceding gene: 148652822
Following gene: 148652826
Centisome position: 40.6
GC content: 50.52
Gene sequence:
>675_bases ATGATAACTAGGTTACCTCTTTGGATTTTGATTGGTGGGGCAGTGCTGGCTTTTAGTGCCGGCTGCATCAATATTATTGC GCTTAGCGGCTTTACCAATTTATCGGTGTCGCATGTGACCGGCAACGTCAGTTATTTTTCGGCAGCGTTGGCGCAGATGA ATTTTTCGCGGGTGCTGTTCGTGGGGGCATCGCTGCTGTCATTCTTGTCAGGCTCGATTTTAAGCGGCTATCTGATTGGC CAGCACTCGTTAAAGCTTGGCCGCCGTTATGGCATTGCCTTATTCACCGAAGCTGGCTTATTGTTTTGCAGCTTTTTACT GTTTTTTCACCATGATTATTTCGGTCAGCTGCTGGCGGCTATGGCTTGCGGGCTACAGAATGCCATGGTAGCCACCTACA GTGGAGCGGTTATTCGCACCACGCATTTGACCGGTCTGACCTCAGACATGGGGGCCGCTATTGGTAACTGGTTGGCAGGT CGACCGATTAGCAAGCTAACCTTGGGCTTCCAGGCCATCATCTGGTACAGCTTCTGTGGCGGCGGTGTGGTAGGGGCTTA TGGGTTTTTTAAATTGGGCTATAGCGCCATGCTTATTCCGGTTGGCATTGTGTTTATGGCAGCCGTCTTCTATCAAGTGG CCTCAAGTCGTCTGCCTGAAAAGCGCGAAACATAA
Upstream 100 bases:
>100_bases GGGCAAATAAGTAGAGGACTGTATACGCGCCCGATGGATAATCTTTTGATTAGTAATATACGTTTTTGATTTGGTACACA CTTAACTGTAAGTAGTGCTT
Downstream 100 bases:
>100_bases CTCAATTAGACCCAAAGCTTAGTCAATAAAAAACCGCTCAAAGCCATTTGAGCGGTTTTTTATTGACTAATTTTTAGCTT CGCGCTTTACATCAATTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MITRLPLWILIGGAVLAFSAGCINIIALSGFTNLSVSHVTGNVSYFSAALAQMNFSRVLFVGASLLSFLSGSILSGYLIG QHSLKLGRRYGIALFTEAGLLFCSFLLFFHHDYFGQLLAAMACGLQNAMVATYSGAVIRTTHLTGLTSDMGAAIGNWLAG RPISKLTLGFQAIIWYSFCGGGVVGAYGFFKLGYSAMLIPVGIVFMAAVFYQVASSRLPEKRET
Sequences:
>Translated_224_residues MITRLPLWILIGGAVLAFSAGCINIIALSGFTNLSVSHVTGNVSYFSAALAQMNFSRVLFVGASLLSFLSGSILSGYLIG QHSLKLGRRYGIALFTEAGLLFCSFLLFFHHDYFGQLLAAMACGLQNAMVATYSGAVIRTTHLTGLTSDMGAAIGNWLAG RPISKLTLGFQAIIWYSFCGGGVVGAYGFFKLGYSAMLIPVGIVFMAAVFYQVASSRLPEKRET >Mature_224_residues MITRLPLWILIGGAVLAFSAGCINIIALSGFTNLSVSHVTGNVSYFSAALAQMNFSRVLFVGASLLSFLSGSILSGYLIG QHSLKLGRRYGIALFTEAGLLFCSFLLFFHHDYFGQLLAAMACGLQNAMVATYSGAVIRTTHLTGLTSDMGAAIGNWLAG RPISKLTLGFQAIIWYSFCGGGVVGAYGFFKLGYSAMLIPVGIVFMAAVFYQVASSRLPEKRET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23897; Mature: 23897
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRLPLWILIGGAVLAFSAGCINIIALSGFTNLSVSHVTGNVSYFSAALAQMNFSRVLF CCCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH VGASLLSFLSGSILSGYLIGQHSLKLGRRYGIALFTEAGLLFCSFLLFFHHDYFGQLLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MACGLQNAMVATYSGAVIRTTHLTGLTSDMGAAIGNWLAGRPISKLTLGFQAIIWYSFCG HHHCCCHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GGVVGAYGFFKLGYSAMLIPVGIVFMAAVFYQVASSRLPEKRET CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MITRLPLWILIGGAVLAFSAGCINIIALSGFTNLSVSHVTGNVSYFSAALAQMNFSRVLF CCCCCHHHHHHHHHHHHHHCCHHEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH VGASLLSFLSGSILSGYLIGQHSLKLGRRYGIALFTEAGLLFCSFLLFFHHDYFGQLLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MACGLQNAMVATYSGAVIRTTHLTGLTSDMGAAIGNWLAGRPISKLTLGFQAIIWYSFCG HHHCCCHHHHHEECCCEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GGVVGAYGFFKLGYSAMLIPVGIVFMAAVFYQVASSRLPEKRET CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA