BacMap

Definition	Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession	NC_009524
Length	2,978,976

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The map label for this gene is 148652821

Identifier: 148652821

GI number: 148652821

Start: 1207141

End: 1207971

Strand: Direct

Name: 148652821

Synonym: PsycPRwf_1014

Alternate gene names: NA

Gene position: 1207141-1207971 (Clockwise)

Preceding gene: 148652819

Following gene: 148652822

Centisome position: 40.52

GC content: 45.97

Gene sequence:

>831_bases
ATGAAAAAACTCTCCTCAAATACGCTAAATCATCTACGCGATCGCATTCATATTATCATTGAAGGCACAGATACGCCTTT
AGGTAAGCTGTTTGATATCGTATTATTGATAGCCATTGCCGCTAGTGTGGCCGTGGTGATGTTAGACAGTGTGCTGTATT
TGCGCCTGCAATTTGGTACAGTATTCTTTTATGCAGAATGGTTTTTTACCATTTTATTCACCATAGAATATTTGCTGCGC
CTGTTTTCGGCACCCAACCGGGTACGCTATGTATTTAGCTTCTTTGGGGTGGTGGACTTATTGTCTGTATTGCCCAGTTA
TTTAAGCTTAATATTTGGTGGTGTTCAGTACTTAATTGTGGTGCGCATCCTACGTATTCTACGTGTGTTCCGAGTGTTAA
AGCTCAAATCTTATATGCAGCAAGCGGGGTTTTTGGCCGCAGCCCTACGCACCAGTCAACAAAAAATCACCGTGTTCTTC
TTGTCCTTGGTGCTGTTGGTTATGATTTTCGGCTCGGTCATCTATGTGGTCGAGGGGCCAGAAAATGGCTTTACCAGTAT
TCCGGTATCTATCTACTGGGCGACGGTAACTTTGACCACGGTGGGCTATGGCGATATGTCACCTAAGACCCCTTTAGGTC
AGTTTATTGCAACCATGGTGATGATGACCGGTTACTCCATTATTGCGGTGCCGACCGGTATCTTTACCTCTGAGCTTGCT
AAGAGCATGCGCCCGCAGCTACATCCAGTCACTTGCCCTAACTGTGGTAAGTTTGGTCACGCCGCCGGTGCTCAGTTTTG
TGACCGCTGTGGTCATGACCTGCACATCTAG

Upstream 100 bases:

>100_bases
ATAAAAAAGGATGTGCTAAAAACAAAGTTTGTCTAATAGGTAACATTGCCGATGTAATAACGTATAATGGGCCACTCTTA
TAGATCAGTTACCCGTATTT

Downstream 100 bases:

>100_bases
TTTTGCCTTATAAGTGCCGATTTTATCTATAATATAGCGGCACTTTGCTCATGTTACAGACGCATTAAGTTATAAATTTT
TACGACCTAATGCCTGACCT

Product: Ion transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGTVFFYAEWFFTILFTIEYLLR
LFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIVVRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFF
LSLVLLVMIFGSVIYVVEGPENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA
KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI

Sequences:

>Translated_276_residues
MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGTVFFYAEWFFTILFTIEYLLR
LFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIVVRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFF
LSLVLLVMIFGSVIYVVEGPENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA
KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI
>Mature_276_residues
MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGTVFFYAEWFFTILFTIEYLLR
LFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIVVRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFF
LSLVLLVMIFGSVIYVVEGPENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA
KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI27436974, Length=236, Percent_Identity=32.6271186440678, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI4826784, Length=184, Percent_Identity=34.7826086956522, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI20070166, Length=169, Percent_Identity=39.0532544378698, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI27436986, Length=188, Percent_Identity=31.9148936170213, Blast_Score=118, Evalue=6e-27,
Organism=Homo sapiens, GI27436984, Length=188, Percent_Identity=31.9148936170213, Blast_Score=118, Evalue=6e-27,
Organism=Homo sapiens, GI9789987, Length=188, Percent_Identity=31.9148936170213, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI27436981, Length=188, Percent_Identity=32.4468085106383, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI88758565, Length=191, Percent_Identity=31.413612565445, Blast_Score=108, Evalue=7e-24,
Organism=Homo sapiens, GI25952108, Length=261, Percent_Identity=29.8850574712644, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4504817, Length=253, Percent_Identity=27.6679841897233, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI13492973, Length=277, Percent_Identity=28.158844765343, Blast_Score=104, Evalue=8e-23,
Organism=Homo sapiens, GI45383011, Length=279, Percent_Identity=26.1648745519713, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI25952092, Length=197, Percent_Identity=30.4568527918782, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI119395748, Length=226, Percent_Identity=28.7610619469027, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI4826782, Length=194, Percent_Identity=29.8969072164948, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI5031819, Length=192, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=8e-22,
Organism=Homo sapiens, GI27436988, Length=184, Percent_Identity=33.695652173913, Blast_Score=101, Evalue=9e-22,
Organism=Homo sapiens, GI25952087, Length=194, Percent_Identity=29.3814432989691, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI27436996, Length=251, Percent_Identity=27.8884462151394, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI4504821, Length=224, Percent_Identity=28.125, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI24497458, Length=198, Percent_Identity=28.7878787878788, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI19424136, Length=185, Percent_Identity=34.5945945945946, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI21217561, Length=198, Percent_Identity=28.7878787878788, Blast_Score=96, Evalue=2e-20,
Organism=Homo sapiens, GI21217563, Length=198, Percent_Identity=28.7878787878788, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI163792201, Length=200, Percent_Identity=30, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI4826786, Length=200, Percent_Identity=30, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI24497460, Length=209, Percent_Identity=28.2296650717703, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI88758576, Length=188, Percent_Identity=29.7872340425532, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI24497462, Length=188, Percent_Identity=29.7872340425532, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI7657289, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI26638655, Length=197, Percent_Identity=30.4568527918782, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI27436993, Length=173, Percent_Identity=27.1676300578035, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI26638653, Length=197, Percent_Identity=30.4568527918782, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI19071574, Length=173, Percent_Identity=27.1676300578035, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI26051262, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI26051260, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI26051266, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI26051264, Length=190, Percent_Identity=25.7894736842105, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI6912444, Length=230, Percent_Identity=28.695652173913, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI236462242, Length=197, Percent_Identity=28.9340101522843, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI28373065, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI236461719, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI236462079, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI236461942, Length=197, Percent_Identity=28.9340101522843, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI26051268, Length=190, Percent_Identity=25.2631578947368, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI32479525, Length=209, Percent_Identity=30.1435406698565, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI32479527, Length=209, Percent_Identity=30.1435406698565, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71989381, Length=210, Percent_Identity=35.2380952380952, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71989376, Length=210, Percent_Identity=35.2380952380952, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71989369, Length=210, Percent_Identity=35.2380952380952, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71989361, Length=210, Percent_Identity=35.2380952380952, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17544122, Length=189, Percent_Identity=34.9206349206349, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71994134, Length=188, Percent_Identity=31.9148936170213, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25148255, Length=234, Percent_Identity=28.6324786324786, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71994313, Length=198, Percent_Identity=33.3333333333333, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193206869, Length=197, Percent_Identity=30.4568527918782, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17569273, Length=187, Percent_Identity=31.5508021390374, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI72000220, Length=187, Percent_Identity=34.2245989304813, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71994320, Length=174, Percent_Identity=34.4827586206897, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI32564076, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI32564088, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI32564084, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI71986008, Length=194, Percent_Identity=35.0515463917526, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI32564082, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI32564090, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI32564086, Length=188, Percent_Identity=30.3191489361702, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71986003, Length=194, Percent_Identity=35.0515463917526, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI71986011, Length=194, Percent_Identity=35.0515463917526, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI32564080, Length=188, Percent_Identity=30.3191489361702, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71986574, Length=186, Percent_Identity=27.4193548387097, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25147238, Length=254, Percent_Identity=25.5905511811024, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI25147242, Length=246, Percent_Identity=25.609756097561, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71985535, Length=187, Percent_Identity=28.8770053475936, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115532628, Length=193, Percent_Identity=31.6062176165803, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71998749, Length=193, Percent_Identity=31.6062176165803, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564074, Length=181, Percent_Identity=33.1491712707182, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32564070, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI32564068, Length=181, Percent_Identity=33.1491712707182, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI32564072, Length=204, Percent_Identity=31.3725490196078, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193207406, Length=196, Percent_Identity=27.5510204081633, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32564066, Length=190, Percent_Identity=27.8947368421053, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17737641, Length=188, Percent_Identity=32.9787234042553, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI161084970, Length=188, Percent_Identity=32.9787234042553, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI116007764, Length=189, Percent_Identity=34.3915343915344, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24656294, Length=189, Percent_Identity=34.3915343915344, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24656289, Length=189, Percent_Identity=34.3915343915344, Blast_Score=110, Evalue=7e-25,
Organism=Drosophila melanogaster, GI281365536, Length=189, Percent_Identity=34.3915343915344, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI17136468, Length=236, Percent_Identity=30.5084745762712, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI221330674, Length=236, Percent_Identity=30.5084745762712, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI28574020, Length=236, Percent_Identity=30.5084745762712, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24642916, Length=228, Percent_Identity=27.6315789473684, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24642914, Length=228, Percent_Identity=27.6315789473684, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24642910, Length=201, Percent_Identity=28.8557213930348, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI45555859, Length=201, Percent_Identity=28.8557213930348, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI45549143, Length=201, Percent_Identity=28.8557213930348, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI161076829, Length=188, Percent_Identity=31.3829787234043, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI221330117, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI281363095, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221330119, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281363097, Length=201, Percent_Identity=30.8457711442786, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR005821
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]

EC number: NA

Molecular weight: Translated: 30831; Mature: 30831

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGT
CCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFFYAEWFFTILFTIEYLLRLFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFFLSLVLLVMIFGSVIYVVEGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECC
ENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA
CCCCCCCCCEEEEEEHEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHEEECCHHHHHHHH
KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKLSSNTLNHLRDRIHIIIEGTDTPLGKLFDIVLLIAIAASVAVVMLDSVLYLRLQFGT
CCCCCHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFFYAEWFFTILFTIEYLLRLFSAPNRVRYVFSFFGVVDLLSVLPSYLSLIFGGVQYLIV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRILRILRVFRVLKLKSYMQQAGFLAAALRTSQQKITVFFLSLVLLVMIFGSVIYVVEGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEECC
ENGFTSIPVSIYWATVTLTTVGYGDMSPKTPLGQFIATMVMMTGYSIIAVPTGIFTSELA
CCCCCCCCCEEEEEEHEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHEEECCHHHHHHHH
KSMRPQLHPVTCPNCGKFGHAAGAQFCDRCGHDLHI
HHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1522059 [H]