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The map label for this gene is ftsY [H]

Identifier: 148652808

GI number: 148652808

Start: 1191225

End: 1192418

Strand: Direct

Name: ftsY [H]

Synonym: PsycPRwf_1001

Alternate gene names: 148652808

Gene position: 1191225-1192418 (Clockwise)

Preceding gene: 148652807

Following gene: 148652809

Centisome position: 39.99

GC content: 48.49

Gene sequence:

>1194_bases
ATGAATAATGCAAATAATCCGACCCGCGTGGTCATTGACCTCGATGGTAGCTTAGATGAATTGGACGATGATGACATCAC
GTTGCCGGATTTGGCTGAGCCGCAAGACATACCTATTATCGAGACCCCTCGTGTGGTGCAGGCCGCCGCAGACACAAAAC
CTAACCCCGTCTCCTCGACATCTACCACTGCCGGCTCAGTAACCTCAACGCCAGAGCCAGTCGCTCAGACGCTGACACAA
AGTGAGCAGCAAAAAGAGGACAAAAAGCGTGGCGGTTGGTTCTCACGCATGAAATCAGGCTTATCTAAATCGCGTAAGAA
TTTGGCAGAGGGTGTGGCCAATATCTTAATCGGTGGTAAAGAGATTGATGATGAGCTACTTGAGGAAGTAGAAGATCAGC
TGTTGGTGGCAGATATTGGGGTAGAAGCGACTGATAAGATTATCAAAAGTTTAACCGAGCAGACCGCCCGCGGTGATTTG
ATTTATTCGCATTCTTTATATAAAGCCTTACAAAAAGAGCTGGTTGAGATTCTTGAGCCAAAAGTGGCCCCGCTGATCAT
TGATACCAGTAAAAAACCTTTTGTTATCTTAGTGGTAGGCGTCAATGGGGTAGGCAAGACCACCACCATTGGTAAATTGG
CCAAGCGATTGCAAGGCGAGGGCAAGTCGGTCATGTTAGCTGCCGGTGATACCTTTAGAGCCGCTGCCACCGAGCAGTTA
CAGGTTTGGGGTGAGCGTAATAATATTCCGGTTGTGGCGCAAGGTCATGGCGCAGACAGTGCGTCAGTGGTCTTCGATGC
CATGCAATCTGCCAAAGCCAAAAATATCGATGTATTAATCGCCGATACAGCTGGCCGCCTGCAAAACAAAACTCACCTGA
TGGCTGAGCTTGAAAAAGTAGTCCGCATCATGCGCAAATCTGATCCCACGGCGCCGCACGAGGGCATGATTGTATTAGAT
GCTGGTACTGGCCAAAACGCCATCAATCAGGTCAAAATCTTTAACGATGCGGTGCCCCTAACCGGCATTACCATCACCAA
ACTTGACGGCACAGCCAAAGGTGGTGTGGTATTTAACATTGCCAATACCACAGACATTCCGATTCGCTATATCGGGGTGG
GTGAGTCTATTGATGACTTACGTGCCTTTAGTCCGAAGCAGTTTGTGGCTGCATTGTTTGAAACCGATGAATAA

Upstream 100 bases:

>100_bases
CCTGGTTTGGGGCAGATATGGTAAACTACGCGGTAATTAAATACTGTATCTCATGATGACACATGCAAAACCATAACTGT
AAATAAAATAAGAGACGCCC

Downstream 100 bases:

>100_bases
TAGGCTTGTGTCTATCTCAAAAAGTAACCTTTACTCTTAAAAAAATGGCATCATAAGGTGCCATTTTTTTGTTTGAGACC
TGTTTTGAGGCCTGTGATTA

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MNNANNPTRVVIDLDGSLDELDDDDITLPDLAEPQDIPIIETPRVVQAAADTKPNPVSSTSTTAGSVTSTPEPVAQTLTQ
SEQQKEDKKRGGWFSRMKSGLSKSRKNLAEGVANILIGGKEIDDELLEEVEDQLLVADIGVEATDKIIKSLTEQTARGDL
IYSHSLYKALQKELVEILEPKVAPLIIDTSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAAATEQL
QVWGERNNIPVVAQGHGADSASVVFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKVVRIMRKSDPTAPHEGMIVLD
AGTGQNAINQVKIFNDAVPLTGITITKLDGTAKGGVVFNIANTTDIPIRYIGVGESIDDLRAFSPKQFVAALFETDE

Sequences:

>Translated_397_residues
MNNANNPTRVVIDLDGSLDELDDDDITLPDLAEPQDIPIIETPRVVQAAADTKPNPVSSTSTTAGSVTSTPEPVAQTLTQ
SEQQKEDKKRGGWFSRMKSGLSKSRKNLAEGVANILIGGKEIDDELLEEVEDQLLVADIGVEATDKIIKSLTEQTARGDL
IYSHSLYKALQKELVEILEPKVAPLIIDTSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAAATEQL
QVWGERNNIPVVAQGHGADSASVVFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKVVRIMRKSDPTAPHEGMIVLD
AGTGQNAINQVKIFNDAVPLTGITITKLDGTAKGGVVFNIANTTDIPIRYIGVGESIDDLRAFSPKQFVAALFETDE
>Mature_397_residues
MNNANNPTRVVIDLDGSLDELDDDDITLPDLAEPQDIPIIETPRVVQAAADTKPNPVSSTSTTAGSVTSTPEPVAQTLTQ
SEQQKEDKKRGGWFSRMKSGLSKSRKNLAEGVANILIGGKEIDDELLEEVEDQLLVADIGVEATDKIIKSLTEQTARGDL
IYSHSLYKALQKELVEILEPKVAPLIIDTSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAAATEQL
QVWGERNNIPVVAQGHGADSASVVFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKVVRIMRKSDPTAPHEGMIVLD
AGTGQNAINQVKIFNDAVPLTGITITKLDGTAKGGVVFNIANTTDIPIRYIGVGESIDDLRAFSPKQFVAALFETDE

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI295424842, Length=322, Percent_Identity=31.055900621118, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI23308697, Length=322, Percent_Identity=31.055900621118, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI4507215, Length=287, Percent_Identity=33.1010452961672, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI226371618, Length=225, Percent_Identity=35.1111111111111, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=32.5925925925926, Blast_Score=79, Evalue=8e-15,
Organism=Escherichia coli, GI1789874, Length=318, Percent_Identity=61.6352201257862, Blast_Score=375, Evalue=1e-105,
Organism=Escherichia coli, GI1788963, Length=294, Percent_Identity=32.9931972789116, Blast_Score=146, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI193206261, Length=335, Percent_Identity=30.4477611940298, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17539958, Length=274, Percent_Identity=30.2919708029197, Blast_Score=130, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6325345, Length=208, Percent_Identity=35.0961538461538, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320498, Length=331, Percent_Identity=29.9093655589124, Blast_Score=113, Evalue=7e-26,
Organism=Drosophila melanogaster, GI17647949, Length=278, Percent_Identity=33.0935251798561, Blast_Score=131, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24641198, Length=357, Percent_Identity=28.5714285714286, Blast_Score=121, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 42555; Mature: 42555

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNANNPTRVVIDLDGSLDELDDDDITLPDLAEPQDIPIIETPRVVQAAADTKPNPVSST
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCCCC
STTAGSVTSTPEPVAQTLTQSEQQKEDKKRGGWFSRMKSGLSKSRKNLAEGVANILIGGK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EIDDELLEEVEDQLLVADIGVEATDKIIKSLTEQTARGDLIYSHSLYKALQKELVEILEP
CCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCC
KVAPLIIDTSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAAATEQL
CCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
QVWGERNNIPVVAQGHGADSASVVFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKV
HCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
VRIMRKSDPTAPHEGMIVLDAGTGQNAINQVKIFNDAVPLTGITITKLDGTAKGGVVFNI
HHHHHCCCCCCCCCCEEEEECCCCCCCHHEEEEECCCCCCCCEEEEEECCCCCCCEEEEE
ANTTDIPIRYIGVGESIDDLRAFSPKQFVAALFETDE
CCCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNNANNPTRVVIDLDGSLDELDDDDITLPDLAEPQDIPIIETPRVVQAAADTKPNPVSST
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHCCCCCCCCCCC
STTAGSVTSTPEPVAQTLTQSEQQKEDKKRGGWFSRMKSGLSKSRKNLAEGVANILIGGK
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
EIDDELLEEVEDQLLVADIGVEATDKIIKSLTEQTARGDLIYSHSLYKALQKELVEILEP
CCCHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCC
KVAPLIIDTSKKPFVILVVGVNGVGKTTTIGKLAKRLQGEGKSVMLAAGDTFRAAATEQL
CCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
QVWGERNNIPVVAQGHGADSASVVFDAMQSAKAKNIDVLIADTAGRLQNKTHLMAELEKV
HCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHH
VRIMRKSDPTAPHEGMIVLDAGTGQNAINQVKIFNDAVPLTGITITKLDGTAKGGVVFNI
HHHHHCCCCCCCCCCEEEEECCCCCCCHHEEEEECCCCCCCCEEEEEECCCCCCCEEEEE
ANTTDIPIRYIGVGESIDDLRAFSPKQFVAALFETDE
CCCCCCCEEEEECCCCHHHHHHCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]