| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is 148652771
Identifier: 148652771
GI number: 148652771
Start: 1150678
End: 1151163
Strand: Direct
Name: 148652771
Synonym: PsycPRwf_0964
Alternate gene names: NA
Gene position: 1150678-1151163 (Clockwise)
Preceding gene: 148652770
Following gene: 148652774
Centisome position: 38.63
GC content: 48.15
Gene sequence:
>486_bases ATGACAGATGATAAATTACTGCAAAAAAGACAGCATTTAGAAGCGCAATCAGAGAAAATTATGGCGATTGCCAAAGAGCC GCATTCTTCTTTGAAGTGTATCCACCTATTAAGCGTGGCAGGCGGCGCGACCAGCGAGACTTATAGCGCCATTGAGCAGC GTATCGTCACTGATGATGATGTCTCAGGCGCCTATCACCTTGCTTTAATGGCACAATCTACCCCAGACTTACCCGTAGAT GCGCGTCAGCTTATTGAGATGGTAGTGACCAAAGGCGACAATGCGCAATTAATCTCCTTATTAAAGAATTTACCGGTACC GCCAGTTGAGGTGATTAAGCAGCGTCTTATCGACAGTGGCGATGAAAACGCCATTGCGCAGATGACCGCTTATCTTGAGG CCAATCCAGAAGGGGTGGGCAGCCAAGGTATGTTAGGCAGTGGCCAAAAAGAGCGTATCGTGCCGTTAAGCCCCTCGCAA AGCTAA
Upstream 100 bases:
>100_bases GATTAGCTTTTATAACAGCGGCGAAACACAGGCAAGATGTCAGCTGAGATCAAGTGGGGTAACCTGTGGGACAAATACGG GCTTAATTAGGAAAATGACT
Downstream 100 bases:
>100_bases CTTTGTAAGAATTGATAACCACCTAAAGGCCCCATAACAGATGTTTTGGGGCCTTTTTTTATTTAAAAATCAGTACACTG TGCTAAGACAATATCTAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTDDKLLQKRQHLEAQSEKIMAIAKEPHSSLKCIHLLSVAGGATSETYSAIEQRIVTDDDVSGAYHLALMAQSTPDLPVD ARQLIEMVVTKGDNAQLISLLKNLPVPPVEVIKQRLIDSGDENAIAQMTAYLEANPEGVGSQGMLGSGQKERIVPLSPSQ S
Sequences:
>Translated_161_residues MTDDKLLQKRQHLEAQSEKIMAIAKEPHSSLKCIHLLSVAGGATSETYSAIEQRIVTDDDVSGAYHLALMAQSTPDLPVD ARQLIEMVVTKGDNAQLISLLKNLPVPPVEVIKQRLIDSGDENAIAQMTAYLEANPEGVGSQGMLGSGQKERIVPLSPSQ S >Mature_160_residues TDDKLLQKRQHLEAQSEKIMAIAKEPHSSLKCIHLLSVAGGATSETYSAIEQRIVTDDDVSGAYHLALMAQSTPDLPVDA RQLIEMVVTKGDNAQLISLLKNLPVPPVEVIKQRLIDSGDENAIAQMTAYLEANPEGVGSQGMLGSGQKERIVPLSPSQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17343; Mature: 17212
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDKLLQKRQHLEAQSEKIMAIAKEPHSSLKCIHLLSVAGGATSETYSAIEQRIVTDDD CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC VSGAYHLALMAQSTPDLPVDARQLIEMVVTKGDNAQLISLLKNLPVPPVEVIKQRLIDSG CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCC DENAIAQMTAYLEANPEGVGSQGMLGSGQKERIVPLSPSQS CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC >Mature Secondary Structure TDDKLLQKRQHLEAQSEKIMAIAKEPHSSLKCIHLLSVAGGATSETYSAIEQRIVTDDD CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC VSGAYHLALMAQSTPDLPVDARQLIEMVVTKGDNAQLISLLKNLPVPPVEVIKQRLIDSG CCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCC DENAIAQMTAYLEANPEGVGSQGMLGSGQKERIVPLSPSQS CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA