| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652740
Identifier: 148652740
GI number: 148652740
Start: 1115791
End: 1116327
Strand: Direct
Name: 148652740
Synonym: PsycPRwf_0933
Alternate gene names: NA
Gene position: 1115791-1116327 (Clockwise)
Preceding gene: 148652739
Following gene: 148652741
Centisome position: 37.46
GC content: 43.58
Gene sequence:
>537_bases ATGGACCCGAAGCATTCTGATAATAATAGTGGCAAACCCACATTAGATAAGCCAAATCTTGATAGGCCAGTCTTTGACTC AACTACTGAGTTTGGGCATTCAAACTTGGTGCGTCAACCCATAGGTGCGCCTGATATATTAAGCCATGAGCAGCAAGAGT CTTTGATTCGTTATAACCACATCACCTACTTATTATATGCGCTTAGCTTTTTTACAGCGGGCTTGATGTGGATAGTGCCT ATTGTTATGAATTATGCCCGCCGCCAGCAGGCTGACGGAACTTGGCTTGCCACACATTTTGATTGGCAAATTAAGACCTT TTGGTACAGTATTATCTTAGGCATCCTAGGCATTATCATAGGTGTGATTGGCTTAGGCGGATTGGGGATAGGTGTGTTTG CCGATAGCTCAAATGTGGCCTTAGGCTCAACTGCTCTTACTGTGGTCGGCGGCATTATATTTTTGTTTTCAATCATTTGG CACATCTACCGTATTGTCAAAGGCTGGATAGCCTTAAGTGATAAGCGGCCTATTTAG
Upstream 100 bases:
>100_bases GCCATGAGATAGGGCGTTATGTGCCTAAGCAGTATTAGCAGCTTTATGGCTTAGCTGATTTTTTGCTGGCTGAAAAAACA ACTTTAAAAAGGGGGCAATA
Downstream 100 bases:
>100_bases TAAGTGGTCATAATAAACGTGCCAAATCTCACAGTGACATCAATCACTTAGCTGTATTTTAGCGGTTATTTTAGTGGTTA TTTTAGTTGTGACTAATCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNHITYLLYALSFFTAGLMWIVP IVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIIIGVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIW HIYRIVKGWIALSDKRPI
Sequences:
>Translated_178_residues MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNHITYLLYALSFFTAGLMWIVP IVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIIIGVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIW HIYRIVKGWIALSDKRPI >Mature_178_residues MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNHITYLLYALSFFTAGLMWIVP IVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIIIGVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIW HIYRIVKGWIALSDKRPI
Specific function: Unknown
COG id: COG3671
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19855; Mature: 19855
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNH CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHH ITYLLYALSFFTAGLMWIVPIVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH GVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIWHIYRIVKGWIALSDKRPI HHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDPKHSDNNSGKPTLDKPNLDRPVFDSTTEFGHSNLVRQPIGAPDILSHEQQESLIRYNH CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHH ITYLLYALSFFTAGLMWIVPIVMNYARRQQADGTWLATHFDWQIKTFWYSIILGILGIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH GVIGLGGLGIGVFADSSNVALGSTALTVVGGIIFLFSIIWHIYRIVKGWIALSDKRPI HHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA