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The map label for this gene is kdsD [H]

Identifier: 148652631

GI number: 148652631

Start: 976910

End: 977908

Strand: Direct

Name: kdsD [H]

Synonym: PsycPRwf_0822

Alternate gene names: 148652631

Gene position: 976910-977908 (Clockwise)

Preceding gene: 148652630

Following gene: 148652632

Centisome position: 32.79

GC content: 49.85

Gene sequence:

>999_bases
ATGCAAACACAACTGCCACCGCCCACTTATGAACAGTATATCAAGTATGCGGTAGATGCCATCCGCACTGAGCAAGCTGC
ATTACAGTTACTAATTGAGCAGCTTGATGAGCGTTTTGTCGAAGCGTGCGAGCTGATTCGCAATTGCAAAGGCCGAGTGG
TGGTCACTGGTATGGGCAAGTCAGGCCATATTGGCCGTAAAATTGCTGCCACCTTTGCCTCAACCGGTTCTCCCTCCTTT
TTTATGCATCCTGGGGAGGCCGGCCATGGTGATTTAGGCATGTTGGTGGCAGGGGATGTGCTGCTGGCCATCTCAAACTC
TGGTGAGTCTGATGAGATTAAGACCTTGTTGCCTGTGGTCAAGCAATTGGCCATTCCTTTAATCAGTATCAGCCGTGATA
AGCGCGGTATGCTGCCTAAGTCTGCAGATGTGGCGCTCACTTTGGGTGCTTCTGAAGAGGCTTGTCCCTTGGGGCTGGCT
CCCACTTCAAGTACCACAGCGACTTTGGCCTTAGGCGATGCTATTGCTGTGGCATTGGTACATGCGCGTCATTTTACCTC
AGAGGATTTTGCGCTGTCACATCCAGCAGGTGCGCTAGGACGTAAGTTATTGATGCGAGTTAGTGACTTGATGCATCAAG
CCCAAAAAGATTTGCAGCTGCCCTTGGTATCGACCGATACCACGTTACATCAGGCACTATTTGTCATGACCAATGGGCGC
TTAGGCATGGCGGTGGTTATGGAGGAGGCGCACAAGGTGGTGGGGATTTTCACCGATGGTGATTTGCGCCGTGCACTTGA
AAAACACATTGATTTGCAAACCCCTATGTCACAAATTATGACCCCCAATCCCAAACAAATCTCAAAAGATATGCGGGCCT
CAGATGCTTTAAGTTTAATGAACGAAAAAGCCATCAGCCAGCTACTGGTAGTCGACGAGCAGCAGCAGCTTGAAGGGGTG
ATTAGCATTCATGACTTATTACAAGCGGGCGTGAGTTAG

Upstream 100 bases:

>100_bases
TTATAGTAAGCTATGAAATAGACCCTGAAGCGTAAGGGTTAAAAAAGCCGTATTCTAATAAAAAATTACATTCCAATAAC
TCATAAAGCCTGATTTTATT

Downstream 100 bases:

>100_bases
GCGTGATCATAAGCTTGTTATCTTAAATCATAAAAGGCTGTGCGCTTTTTACAGCTGTTGAGCCACTAAATACTGTCTTA
TTTTTTAATACATTTCAATT

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MQTQLPPPTYEQYIKYAVDAIRTEQAALQLLIEQLDERFVEACELIRNCKGRVVVTGMGKSGHIGRKIAATFASTGSPSF
FMHPGEAGHGDLGMLVAGDVLLAISNSGESDEIKTLLPVVKQLAIPLISISRDKRGMLPKSADVALTLGASEEACPLGLA
PTSSTTATLALGDAIAVALVHARHFTSEDFALSHPAGALGRKLLMRVSDLMHQAQKDLQLPLVSTDTTLHQALFVMTNGR
LGMAVVMEEAHKVVGIFTDGDLRRALEKHIDLQTPMSQIMTPNPKQISKDMRASDALSLMNEKAISQLLVVDEQQQLEGV
ISIHDLLQAGVS

Sequences:

>Translated_332_residues
MQTQLPPPTYEQYIKYAVDAIRTEQAALQLLIEQLDERFVEACELIRNCKGRVVVTGMGKSGHIGRKIAATFASTGSPSF
FMHPGEAGHGDLGMLVAGDVLLAISNSGESDEIKTLLPVVKQLAIPLISISRDKRGMLPKSADVALTLGASEEACPLGLA
PTSSTTATLALGDAIAVALVHARHFTSEDFALSHPAGALGRKLLMRVSDLMHQAQKDLQLPLVSTDTTLHQALFVMTNGR
LGMAVVMEEAHKVVGIFTDGDLRRALEKHIDLQTPMSQIMTPNPKQISKDMRASDALSLMNEKAISQLLVVDEQQQLEGV
ISIHDLLQAGVS
>Mature_332_residues
MQTQLPPPTYEQYIKYAVDAIRTEQAALQLLIEQLDERFVEACELIRNCKGRVVVTGMGKSGHIGRKIAATFASTGSPSF
FMHPGEAGHGDLGMLVAGDVLLAISNSGESDEIKTLLPVVKQLAIPLISISRDKRGMLPKSADVALTLGASEEACPLGLA
PTSSTTATLALGDAIAVALVHARHFTSEDFALSHPAGALGRKLLMRVSDLMHQAQKDLQLPLVSTDTTLHQALFVMTNGR
LGMAVVMEEAHKVVGIFTDGDLRRALEKHIDLQTPMSQIMTPNPKQISKDMRASDALSLMNEKAISQLLVVDEQQQLEGV
ISIHDLLQAGVS

Specific function: Catalyzes the interconversion of D-arabinose 5-phosphate and D-ribulose 5-phosphate [H]

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=314, Percent_Identity=52.2292993630573, Blast_Score=319, Evalue=1e-88,
Organism=Escherichia coli, GI87082151, Length=301, Percent_Identity=44.1860465116279, Blast_Score=248, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: =5.3.1.13 [H]

Molecular weight: Translated: 35687; Mature: 35687

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTQLPPPTYEQYIKYAVDAIRTEQAALQLLIEQLDERFVEACELIRNCKGRVVVTGMGK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SGHIGRKIAATFASTGSPSFFMHPGEAGHGDLGMLVAGDVLLAISNSGESDEIKTLLPVV
CCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCHHEECCCEEEEEECCCCCHHHHHHHHHH
KQLAIPLISISRDKRGMLPKSADVALTLGASEEACPLGLAPTSSTTATLALGDAIAVALV
HHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH
HARHFTSEDFALSHPAGALGRKLLMRVSDLMHQAQKDLQLPLVSTDTTLHQALFVMTNGR
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHEEHEEECCC
LGMAVVMEEAHKVVGIFTDGDLRRALEKHIDLQTPMSQIMTPNPKQISKDMRASDALSLM
CCHHHHHHHHCCEEEEEECHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH
NEKAISQLLVVDEQQQLEGVISIHDLLQAGVS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQTQLPPPTYEQYIKYAVDAIRTEQAALQLLIEQLDERFVEACELIRNCKGRVVVTGMGK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
SGHIGRKIAATFASTGSPSFFMHPGEAGHGDLGMLVAGDVLLAISNSGESDEIKTLLPVV
CCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCHHEECCCEEEEEECCCCCHHHHHHHHHH
KQLAIPLISISRDKRGMLPKSADVALTLGASEEACPLGLAPTSSTTATLALGDAIAVALV
HHHHHHHHEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH
HARHFTSEDFALSHPAGALGRKLLMRVSDLMHQAQKDLQLPLVSTDTTLHQALFVMTNGR
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHEEHEEECCC
LGMAVVMEEAHKVVGIFTDGDLRRALEKHIDLQTPMSQIMTPNPKQISKDMRASDALSLM
CCHHHHHHHHCCEEEEEECHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHH
NEKAISQLLVVDEQQQLEGVISIHDLLQAGVS
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]