| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
Click here to switch to the map view.
The map label for this gene is 148652596
Identifier: 148652596
GI number: 148652596
Start: 937687
End: 939357
Strand: Direct
Name: 148652596
Synonym: PsycPRwf_0787
Alternate gene names: NA
Gene position: 937687-939357 (Clockwise)
Preceding gene: 148652589
Following gene: 148652597
Centisome position: 31.48
GC content: 48.53
Gene sequence:
>1671_bases ATGGCTAAGCAAAACCAAATCGACGCTAAAGAGATTCGCATTGACGCTGATCCTTTAAGCACCTTTCATATGGACGAAGA GACACTGCGATTAGAGCTGGTTAAGGCGCAATATGCGCTACGAGAGACCCGTCAGCAAGGGCAAGCCACAGGACTGTTGG TGTTGGTCAATGGTATGGAGCTATCTGGTAAAGGGGCTGCGGTGACTCAGCTGCGTCAGTGGGTCGATCCTAGACTACTA AACGTCGAAGCCAATATTGGCACCTTGCCCAGTGAGTATGAGCCCCTATGGCAAGCGCATGTGGCCAAGCTACCGCGCCA TGGCAACATCACCGCCTACTTCGGTAACTGGTATGCCGACTTAATGGAAGGGGTGCTACAAAAAATGAAGCAGGATAAAA ACAAATCTCAACACAATGAGCTTGCTGACTGGGAGGCGTATCTGCGCGGTCAATTACAGGTCTTGTCTGAATTTGAAACC GACTTAATCAACAACCATACCAAACTGTTAAAGTGTTGGTTTCATATAGATGAGCGCACCTTAAAGTCGCGCCTTAAAGA TAACAAGGCTGATCCTGAGTGGTTATATCACATGGACTGGCAGGATAAAAAACGGGTGAAACAGTTTAATGACATTGCCA AAATCATCTTAAGTCAGCAATCAGATTGGGTCATCATAGATGGCTCTGACCCTGAAGAGGGCGGGGATAAGCATGACAAA AAGTCCCATAAAGACTTGGGCTATAGTGAGGCGGCCAGCTTACAGTTTTGTCATGAAGTGCTGCATGCAACGCAGTCAGC TTTAATCAGTAGTCAACAAAATGACAGCAAACATCCTTTGGTATCGCAAGTCAGCCGCAATATCAATGCCGCTTTTTCAT GGGCAGATGTGCCTGATAAGCTCACCGATATAGATGATCCTGATATGGGTAAGTCAGATTACCAAAAAGCTTTGATCAAA AAGCAAGAGCGCTTAGCTGAGCTATTACGAGCCCGTGCCAACTCTGAGGGCAAAGGCGGCAGACAGGGCAAATCTGCTGC CAAAAATCACCATGTGGTGTTTGCTTTTGAGGGGATGGATGCTGCCGGCAAGGGCGGCGCAATCAAGCGTTTGGTGGCAC TGTTAGACCCACGTGAATATCAGATTTATAACATATCAGCGCCCAACCAGATGGAGCTACAGCACCCTTATTTATGGCGC TTTTGGCGACGGATGCCGGAGTTTGCGCCCAATCTAAAAGAGGAGCGCTTAAGCCGAGTGGCCATCTTTGATAGAACCTG GTATGGCCGAGTATTGGTCGAGCGCATCGAAGGTTTTGCCAGTGAGGCGGCCTGGCAGCGGGCGTATGAAGAGATTAACC GTATGGAGCGGGACTTGGTAGATAAAGGGACCATTGTCATCAAGTACTGGCTGGCCATAGACAAGCAAGAGCAGCTCGAC CGCTTTGAGGACAGAAAAGATACGCCGCACAAGCAGTTTAAACTGACCGAAGATGATTGGCGCAACCGAGACAAGTGGCA TGAGTATGTACAGGCGGCAGCGGATATGTTGGCGCGTACCAATACTAAGCATGCACCTTGGCATGTGGTGGCCACCAATG ACAAGCGAACTGCACGTTTGGCTGTGCTTGATCATGCCATTGCTCAGCTTGAAAAAGTCATTAAAACTTAA
Upstream 100 bases:
>100_bases ACAGCAGGCATAGATGCTAGATAAGTTATAAATGACACGTCATAAAAAATAAGACACACTCAATTGATTATTGGACGATT TGAATAATAAGGATTCACTG
Downstream 100 bases:
>100_bases TCAAAAAAAACAGCGGTTTCAAGTTGCATCGGACAAGGGTATAATATGCAGAATTTATGCCCCAACAGGTATAATTGATA GTTATTAATGCCGACAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MAKQNQIDAKEIRIDADPLSTFHMDEETLRLELVKAQYALRETRQQGQATGLLVLVNGMELSGKGAAVTQLRQWVDPRLL NVEANIGTLPSEYEPLWQAHVAKLPRHGNITAYFGNWYADLMEGVLQKMKQDKNKSQHNELADWEAYLRGQLQVLSEFET DLINNHTKLLKCWFHIDERTLKSRLKDNKADPEWLYHMDWQDKKRVKQFNDIAKIILSQQSDWVIIDGSDPEEGGDKHDK KSHKDLGYSEAASLQFCHEVLHATQSALISSQQNDSKHPLVSQVSRNINAAFSWADVPDKLTDIDDPDMGKSDYQKALIK KQERLAELLRARANSEGKGGRQGKSAAKNHHVVFAFEGMDAAGKGGAIKRLVALLDPREYQIYNISAPNQMELQHPYLWR FWRRMPEFAPNLKEERLSRVAIFDRTWYGRVLVERIEGFASEAAWQRAYEEINRMERDLVDKGTIVIKYWLAIDKQEQLD RFEDRKDTPHKQFKLTEDDWRNRDKWHEYVQAAADMLARTNTKHAPWHVVATNDKRTARLAVLDHAIAQLEKVIKT
Sequences:
>Translated_556_residues MAKQNQIDAKEIRIDADPLSTFHMDEETLRLELVKAQYALRETRQQGQATGLLVLVNGMELSGKGAAVTQLRQWVDPRLL NVEANIGTLPSEYEPLWQAHVAKLPRHGNITAYFGNWYADLMEGVLQKMKQDKNKSQHNELADWEAYLRGQLQVLSEFET DLINNHTKLLKCWFHIDERTLKSRLKDNKADPEWLYHMDWQDKKRVKQFNDIAKIILSQQSDWVIIDGSDPEEGGDKHDK KSHKDLGYSEAASLQFCHEVLHATQSALISSQQNDSKHPLVSQVSRNINAAFSWADVPDKLTDIDDPDMGKSDYQKALIK KQERLAELLRARANSEGKGGRQGKSAAKNHHVVFAFEGMDAAGKGGAIKRLVALLDPREYQIYNISAPNQMELQHPYLWR FWRRMPEFAPNLKEERLSRVAIFDRTWYGRVLVERIEGFASEAAWQRAYEEINRMERDLVDKGTIVIKYWLAIDKQEQLD RFEDRKDTPHKQFKLTEDDWRNRDKWHEYVQAAADMLARTNTKHAPWHVVATNDKRTARLAVLDHAIAQLEKVIKT >Mature_555_residues AKQNQIDAKEIRIDADPLSTFHMDEETLRLELVKAQYALRETRQQGQATGLLVLVNGMELSGKGAAVTQLRQWVDPRLLN VEANIGTLPSEYEPLWQAHVAKLPRHGNITAYFGNWYADLMEGVLQKMKQDKNKSQHNELADWEAYLRGQLQVLSEFETD LINNHTKLLKCWFHIDERTLKSRLKDNKADPEWLYHMDWQDKKRVKQFNDIAKIILSQQSDWVIIDGSDPEEGGDKHDKK SHKDLGYSEAASLQFCHEVLHATQSALISSQQNDSKHPLVSQVSRNINAAFSWADVPDKLTDIDDPDMGKSDYQKALIKK QERLAELLRARANSEGKGGRQGKSAAKNHHVVFAFEGMDAAGKGGAIKRLVALLDPREYQIYNISAPNQMELQHPYLWRF WRRMPEFAPNLKEERLSRVAIFDRTWYGRVLVERIEGFASEAAWQRAYEEINRMERDLVDKGTIVIKYWLAIDKQEQLDR FEDRKDTPHKQFKLTEDDWRNRDKWHEYVQAAADMLARTNTKHAPWHVVATNDKRTARLAVLDHAIAQLEKVIKT
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 64348; Mature: 64217
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQNQIDAKEIRIDADPLSTFHMDEETLRLELVKAQYALRETRQQGQATGLLVLVNGME CCCCCCCCHHHEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCE LSGKGAAVTQLRQWVDPRLLNVEANIGTLPSEYEPLWQAHVAKLPRHGNITAYFGNWYAD ECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECHHHHH LMEGVLQKMKQDKNKSQHNELADWEAYLRGQLQVLSEFETDLINNHTKLLKCWFHIDERT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LKSRLKDNKADPEWLYHMDWQDKKRVKQFNDIAKIILSQQSDWVIIDGSDPEEGGDKHDK HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCH KSHKDLGYSEAASLQFCHEVLHATQSALISSQQNDSKHPLVSQVSRNINAAFSWADVPDK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCHH LTDIDDPDMGKSDYQKALIKKQERLAELLRARANSEGKGGRQGKSAAKNHHVVFAFEGMD HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEECCCC AAGKGGAIKRLVALLDPREYQIYNISAPNQMELQHPYLWRFWRRMPEFAPNLKEERLSRV CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH AIFDRTWYGRVLVERIEGFASEAAWQRAYEEINRMERDLVDKGTIVIKYWLAIDKQEQLD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH RFEDRKDTPHKQFKLTEDDWRNRDKWHEYVQAAADMLARTNTKHAPWHVVATNDKRTARL HHHHCCCCCCHHEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH AVLDHAIAQLEKVIKT HHHHHHHHHHHHHHCC >Mature Secondary Structure AKQNQIDAKEIRIDADPLSTFHMDEETLRLELVKAQYALRETRQQGQATGLLVLVNGME CCCCCCCHHHEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCE LSGKGAAVTQLRQWVDPRLLNVEANIGTLPSEYEPLWQAHVAKLPRHGNITAYFGNWYAD ECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECHHHHH LMEGVLQKMKQDKNKSQHNELADWEAYLRGQLQVLSEFETDLINNHTKLLKCWFHIDERT HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LKSRLKDNKADPEWLYHMDWQDKKRVKQFNDIAKIILSQQSDWVIIDGSDPEEGGDKHDK HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCH KSHKDLGYSEAASLQFCHEVLHATQSALISSQQNDSKHPLVSQVSRNINAAFSWADVPDK HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEECCCCCHH LTDIDDPDMGKSDYQKALIKKQERLAELLRARANSEGKGGRQGKSAAKNHHVVFAFEGMD HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCEEEEECCCC AAGKGGAIKRLVALLDPREYQIYNISAPNQMELQHPYLWRFWRRMPEFAPNLKEERLSRV CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHH AIFDRTWYGRVLVERIEGFASEAAWQRAYEEINRMERDLVDKGTIVIKYWLAIDKQEQLD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH RFEDRKDTPHKQFKLTEDDWRNRDKWHEYVQAAADMLARTNTKHAPWHVVATNDKRTARL HHHHCCCCCCHHEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHH AVLDHAIAQLEKVIKT HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]