| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is catD [H]
Identifier: 148652589
GI number: 148652589
Start: 929253
End: 930083
Strand: Direct
Name: catD [H]
Synonym: PsycPRwf_0780
Alternate gene names: 148652589
Gene position: 929253-930083 (Clockwise)
Preceding gene: 148652588
Following gene: 148652596
Centisome position: 31.19
GC content: 46.93
Gene sequence:
>831_bases ATGCCTTACATTACCCTTAACAACGCCCATATCTATTACGAAGACAGTGCCCCCAATGAAAGCCGCTTTGAGCCGCAGTA TCGCAAGCCGGTGATGCTTTTTGCTCATGGTCTGCTGTGGGGCACACCGTTATTTGATAAACAAGTGGCTTATTTTCAAT CAAAGTACCGCTGCATTGCTTTTGATTTTCGAGGTCAAGGTCAATCAGAGGTAACCAAAGATGGCTATGATATGGATAGC CTAGCGGATGATGCCATTGCTTTGCTAGAGGCATTAGACATTGATAAGTGCCATTTTATTGGGCTATCAATGGGCGGCTT CGTTGGCCAGAGGGTGGCAATCAGACGCCCAGATTTACTCAAATCTTTGATATTACTTGAGACCTCAGCTGATGCTGAAG ACCCCAAAAAGGCGGTCAGCTACAATAAGCTAATGCGCGCCATCTCTTGGCTTGGTATCAGACGAGTCAGCAAAAAGGTT ATGCCCATCATGTTTGGTAAAACTTTTTTGTCAGATCGCACGCGCCGCGAAGAGTATCAGTTGTGGCTAAGTCACCTAAA TAGCAACAGCAAAAAAGGGGCGATACACGCCACACGCGGGGTGATACAGCGTGAGGAGGTATTGTCAAAGCTTGGTGATA TAACAACGCCCACGCTGATATTGGTTGGTGATGAAGATGTCGCCACCCCTTATGATAAGGCGCAGCGCATCCACTTTGCT ATTCAAGGCTCAAAACTTGCCGTCATTCAACGAGCAGGGCATACCTCAACGGTAGAAGAGCCTGAGCAGGTCAACCACAA TATTGAGTGGTTTTTAAGCCTGCTGGATTAA
Upstream 100 bases:
>100_bases TTGGCTACAGACAGCCAGGCTATTTGTGGTTAAATATAAGGGTGAAGTCAGCATACTGGCTTTACCCTGTTTTTTTTGCT CGCACAAGGAAGTCGTTACC
Downstream 100 bases:
>100_bases GGCAGTTGTCTTTATTGACCAAAACGAGCGTCAGTCATGTGACGCTGGCCTAGTTAAGCTTTATTTTATCTTTAAGCAAA AATTCCATTAAGGCTTTTTG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MPYITLNNAHIYYEDSAPNESRFEPQYRKPVMLFAHGLLWGTPLFDKQVAYFQSKYRCIAFDFRGQGQSEVTKDGYDMDS LADDAIALLEALDIDKCHFIGLSMGGFVGQRVAIRRPDLLKSLILLETSADAEDPKKAVSYNKLMRAISWLGIRRVSKKV MPIMFGKTFLSDRTRREEYQLWLSHLNSNSKKGAIHATRGVIQREEVLSKLGDITTPTLILVGDEDVATPYDKAQRIHFA IQGSKLAVIQRAGHTSTVEEPEQVNHNIEWFLSLLD
Sequences:
>Translated_276_residues MPYITLNNAHIYYEDSAPNESRFEPQYRKPVMLFAHGLLWGTPLFDKQVAYFQSKYRCIAFDFRGQGQSEVTKDGYDMDS LADDAIALLEALDIDKCHFIGLSMGGFVGQRVAIRRPDLLKSLILLETSADAEDPKKAVSYNKLMRAISWLGIRRVSKKV MPIMFGKTFLSDRTRREEYQLWLSHLNSNSKKGAIHATRGVIQREEVLSKLGDITTPTLILVGDEDVATPYDKAQRIHFA IQGSKLAVIQRAGHTSTVEEPEQVNHNIEWFLSLLD >Mature_275_residues PYITLNNAHIYYEDSAPNESRFEPQYRKPVMLFAHGLLWGTPLFDKQVAYFQSKYRCIAFDFRGQGQSEVTKDGYDMDSL ADDAIALLEALDIDKCHFIGLSMGGFVGQRVAIRRPDLLKSLILLETSADAEDPKKAVSYNKLMRAISWLGIRRVSKKVM PIMFGKTFLSDRTRREEYQLWLSHLNSNSKKGAIHATRGVIQREEVLSKLGDITTPTLILVGDEDVATPYDKAQRIHFAI QGSKLAVIQRAGHTSTVEEPEQVNHNIEWFLSLLD
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 31338; Mature: 31207
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYITLNNAHIYYEDSAPNESRFEPQYRKPVMLFAHGLLWGTPLFDKQVAYFQSKYRCIA CCEEEECCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEEE FDFRGQGQSEVTKDGYDMDSLADDAIALLEALDIDKCHFIGLSMGGFVGQRVAIRRPDLL EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHCEEEECCHHHH KSLILLETSADAEDPKKAVSYNKLMRAISWLGIRRVSKKVMPIMFGKTFLSDRTRREEYQ HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLSHLNSNSKKGAIHATRGVIQREEVLSKLGDITTPTLILVGDEDVATPYDKAQRIHFA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCEEEEE IQGSKLAVIQRAGHTSTVEEPEQVNHNIEWFLSLLD EECCEEEEEEECCCCCCCCCHHHHCCCHHHHHEECC >Mature Secondary Structure PYITLNNAHIYYEDSAPNESRFEPQYRKPVMLFAHGLLWGTPLFDKQVAYFQSKYRCIA CEEEECCCEEEECCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCCEEEE FDFRGQGQSEVTKDGYDMDSLADDAIALLEALDIDKCHFIGLSMGGFVGQRVAIRRPDLL EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHCEEEECCHHHH KSLILLETSADAEDPKKAVSYNKLMRAISWLGIRRVSKKVMPIMFGKTFLSDRTRREEYQ HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWLSHLNSNSKKGAIHATRGVIQREEVLSKLGDITTPTLILVGDEDVATPYDKAQRIHFA HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCEEEEE IQGSKLAVIQRAGHTSTVEEPEQVNHNIEWFLSLLD EECCEEEEEEECCCCCCCCCHHHHCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]