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The map label for this gene is rpiA [H]

Identifier: 148652588

GI number: 148652588

Start: 928487

End: 929146

Strand: Direct

Name: rpiA [H]

Synonym: PsycPRwf_0779

Alternate gene names: 148652588

Gene position: 928487-929146 (Clockwise)

Preceding gene: 148652579

Following gene: 148652589

Centisome position: 31.17

GC content: 46.67

Gene sequence:

>660_bases
ATGAGTCAGCAACTTAAGCTTAAACAAGAGGTCGCAAAAGCGGCATTGGCTTATATCGATGATGGTATGATTTTGGGTGT
GGGCACAGGCAGTACGGTCAACTGCTTAATTGAGCTTTTGCCTCAGGTCAACCTAAAAGGCGCTGTGGCAAGCTCACAGG
TGACCCAAGATAAGCTTGAAGCGCTTGGCATTGAAGTTATGGACTTAAACTATGTGGGCGAGCTTGACCTGTATATCGAT
GGCGCAGATGAGGTCAATCCAAACCTGCAACTGATCAAAGGCGGTGGCGGCGCTTTAACTCGCGAAAAAATTGTAGCCGC
CGCTTCAAAACAATTCATTTGTTTAGTAGATGAAAGCAAATGGGTGACACAGTTAGGGCGAGAGTTTCCGGTACCGATTG
AGGTGTTGCCCCAAGCGCGCTCTTATGTGGCACGCCAATTGGTTAAAATGGGCGGTGAGCCTGTGTACCGTGAAGACTTC
ATTACCGATTACGGCAATGTAATTTTGGATACTTATAATCTAGACATCACGAGTGCCAGTGAGTTTGAAGCGCGTTTGAA
CAATATTGTGGGCGTGGTATGTAACGGTATCTTTGCGGCCAATCAAGCTGATAAGCTGCTAATTGCCAAATCAACAGGTG
TTGAGACGTTACAGCGCTAA

Upstream 100 bases:

>100_bases
GAGGGTAAAAGTGGCGAAAATACGGGGCAGATTTGATATTATGGCAGCTGATTATTTTCGACATAATATCTTCTTTACTT
CATAAACAAAAAGGGCAGTT

Downstream 100 bases:

>100_bases
TATAAATTGGCTACAGACAGCCAGGCTATTTGTGGTTAAATATAAGGGTGAAGTCAGCATACTGGCTTTACCCTGTTTTT
TTTGCTCGCACAAGGAAGTC

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSQQLKLKQEVAKAALAYIDDGMILGVGTGSTVNCLIELLPQVNLKGAVASSQVTQDKLEALGIEVMDLNYVGELDLYID
GADEVNPNLQLIKGGGGALTREKIVAAASKQFICLVDESKWVTQLGREFPVPIEVLPQARSYVARQLVKMGGEPVYREDF
ITDYGNVILDTYNLDITSASEFEARLNNIVGVVCNGIFAANQADKLLIAKSTGVETLQR

Sequences:

>Translated_219_residues
MSQQLKLKQEVAKAALAYIDDGMILGVGTGSTVNCLIELLPQVNLKGAVASSQVTQDKLEALGIEVMDLNYVGELDLYID
GADEVNPNLQLIKGGGGALTREKIVAAASKQFICLVDESKWVTQLGREFPVPIEVLPQARSYVARQLVKMGGEPVYREDF
ITDYGNVILDTYNLDITSASEFEARLNNIVGVVCNGIFAANQADKLLIAKSTGVETLQR
>Mature_218_residues
SQQLKLKQEVAKAALAYIDDGMILGVGTGSTVNCLIELLPQVNLKGAVASSQVTQDKLEALGIEVMDLNYVGELDLYIDG
ADEVNPNLQLIKGGGGALTREKIVAAASKQFICLVDESKWVTQLGREFPVPIEVLPQARSYVARQLVKMGGEPVYREDFI
TDYGNVILDTYNLDITSASEFEARLNNIVGVVCNGIFAANQADKLLIAKSTGVETLQR

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=229, Percent_Identity=35.3711790393013, Blast_Score=102, Evalue=3e-22,
Organism=Escherichia coli, GI1789280, Length=218, Percent_Identity=50.9174311926605, Blast_Score=213, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI17551758, Length=228, Percent_Identity=37.719298245614, Blast_Score=112, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6324669, Length=244, Percent_Identity=32.3770491803279, Blast_Score=83, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281364072, Length=224, Percent_Identity=33.4821428571429, Blast_Score=84, Evalue=6e-17,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 23693; Mature: 23561

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQLKLKQEVAKAALAYIDDGMILGVGTGSTVNCLIELLPQVNLKGAVASSQVTQDKLE
CCCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALGIEVMDLNYVGELDLYIDGADEVNPNLQLIKGGGGALTREKIVAAASKQFICLVDESK
HHCEEEEEECEECEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCH
WVTQLGREFPVPIEVLPQARSYVARQLVKMGGEPVYREDFITDYGNVILDTYNLDITSAS
HHHHHCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCCCHH
EFEARLNNIVGVVCNGIFAANQADKLLIAKSTGVETLQR
HHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCHHHHCC
>Mature Secondary Structure 
SQQLKLKQEVAKAALAYIDDGMILGVGTGSTVNCLIELLPQVNLKGAVASSQVTQDKLE
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ALGIEVMDLNYVGELDLYIDGADEVNPNLQLIKGGGGALTREKIVAAASKQFICLVDESK
HHCEEEEEECEECEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEECCH
WVTQLGREFPVPIEVLPQARSYVARQLVKMGGEPVYREDFITDYGNVILDTYNLDITSAS
HHHHHCCCCCCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCCCCCHH
EFEARLNNIVGVVCNGIFAANQADKLLIAKSTGVETLQR
HHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA