BacMap

Definition	Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession	NC_009524
Length	2,978,976

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The map label for this gene is rhlB [H]

Identifier: 148652579

GI number: 148652579

Start: 919998

End: 921149

Strand: Direct

Name: rhlB [H]

Synonym: PsycPRwf_0770

Alternate gene names: 148652579

Gene position: 919998-921149 (Clockwise)

Preceding gene: 148652578

Following gene: 148652588

Centisome position: 30.88

GC content: 44.97

Gene sequence:

>1152_bases
ATGGATGAGTTTATTACCTTTGCTGATTTGTCCTTAAGTGACAGTATCTTACGCTCAGTCAATGACTTAGGTTTTACCGA
GTTGACCGGTATCCAAGCGCAGATTTTACCGCATACGTTAGCTGGGCAAGATGCCATTGGTCAGGCACAAACCGGAACAG
GTAAGACAGCCACTTTTTTAATTACTATTATTGAGGCATTACTAAAGCGCCCATTTGCAGATGATGAAATGCGTTATATT
GGCGAGCCAAGAGCGCTGATTTTGGCACCCACTCGAGAGTTGGCCAATCAGATCTATGACGATGCCATTGCCTTGACTAA
ACACACCAGCTTACACAGTGTGTGCGTGATGGGTGGGATTGATTATGATAAGCAGATTGCCGCGCTAGATAAAAGCTATA
CCGATATTTTGATTGCCACCCCCGGGCGCTTGATTGACTTAATTTACAAAGGCCATGTGTTTTTAGATCGTATTGAAGCC
TTTGTCTTAGATGAAGCCGATCGTATGCTAGATATGGGTTTTATTCCAGATATTAAGCGTTTGATGCGTTATATGCCGCC
CAACACCGATCGTCAAAGCCTGCTGTTTTCGGCCACCTTTAACCAAGATGTGATGAATCTAGCCTATCAATGGCTTATGA
ATCCGGTGTTCGTAGAGATTGAGCCTGAGCATAAGACCAGTGATTTGGTTGAGCAGCATTTTTATCTGTTGACCGAAGCC
GATAAACATCAAGCATTGATCCAGATTTTGGCGCAGCCTGAGACAAAAAAGGTGATCGTATTTGCCAATCGCAAGGATCA
GGTAAAACGCTTATATACCAAGTTAAGCGCGGATCATAATGTGGTGATGCTCTCAGGTGATGTGGATCAAGCCAAGCGTG
AGCGTTACTTGGATAAATTTAAAAATGGCAATGCTAAGGTACTTGTGGCGACTGATGTGGCGGGACGTGGCATTCATGTT
GATGACATCAGCCATGTGGTCAATTACACCTTACCGGATCAGCCCGATGATTATGTACATCGCATCGGCCGTACTGGGCG
GGCCGGCCAAAAAGGTATCAGTATTAGCTTTGTTAGTGAAGATGATGCCTTTAACCTGCCGGCCATTGAAGCGCATTTAG
ACCGCCACTTAAAACTTGAGCAGTGGGGCTAA

Upstream 100 bases:

>100_bases
TAGGATTAGGATTAGGATTAGGATTAGGATGGGCAATAATTGGGTCAATAGCCTATAATAGATAAAGATAATATTAACCC
ACAAAGATTAAGGAAGTTTA

Downstream 100 bases:

>100_bases
GCTTCTAAGTCAAGGTGTTTAAATTAAGGCTGGGTTGATGATGAGGTTGACTCAGCTGGCGGATGTTGGTGCTTGCTCAT
ATCTGTCATGTCTGCCATAT

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MDEFITFADLSLSDSILRSVNDLGFTELTGIQAQILPHTLAGQDAIGQAQTGTGKTATFLITIIEALLKRPFADDEMRYI
GEPRALILAPTRELANQIYDDAIALTKHTSLHSVCVMGGIDYDKQIAALDKSYTDILIATPGRLIDLIYKGHVFLDRIEA
FVLDEADRMLDMGFIPDIKRLMRYMPPNTDRQSLLFSATFNQDVMNLAYQWLMNPVFVEIEPEHKTSDLVEQHFYLLTEA
DKHQALIQILAQPETKKVIVFANRKDQVKRLYTKLSADHNVVMLSGDVDQAKRERYLDKFKNGNAKVLVATDVAGRGIHV
DDISHVVNYTLPDQPDDYVHRIGRTGRAGQKGISISFVSEDDAFNLPAIEAHLDRHLKLEQWG

Sequences:

>Translated_383_residues
MDEFITFADLSLSDSILRSVNDLGFTELTGIQAQILPHTLAGQDAIGQAQTGTGKTATFLITIIEALLKRPFADDEMRYI
GEPRALILAPTRELANQIYDDAIALTKHTSLHSVCVMGGIDYDKQIAALDKSYTDILIATPGRLIDLIYKGHVFLDRIEA
FVLDEADRMLDMGFIPDIKRLMRYMPPNTDRQSLLFSATFNQDVMNLAYQWLMNPVFVEIEPEHKTSDLVEQHFYLLTEA
DKHQALIQILAQPETKKVIVFANRKDQVKRLYTKLSADHNVVMLSGDVDQAKRERYLDKFKNGNAKVLVATDVAGRGIHV
DDISHVVNYTLPDQPDDYVHRIGRTGRAGQKGISISFVSEDDAFNLPAIEAHLDRHLKLEQWG
>Mature_383_residues
MDEFITFADLSLSDSILRSVNDLGFTELTGIQAQILPHTLAGQDAIGQAQTGTGKTATFLITIIEALLKRPFADDEMRYI
GEPRALILAPTRELANQIYDDAIALTKHTSLHSVCVMGGIDYDKQIAALDKSYTDILIATPGRLIDLIYKGHVFLDRIEA
FVLDEADRMLDMGFIPDIKRLMRYMPPNTDRQSLLFSATFNQDVMNLAYQWLMNPVFVEIEPEHKTSDLVEQHFYLLTEA
DKHQALIQILAQPETKKVIVFANRKDQVKRLYTKLSADHNVVMLSGDVDQAKRERYLDKFKNGNAKVLVATDVAGRGIHV
DDISHVVNYTLPDQPDDYVHRIGRTGRAGQKGISISFVSEDDAFNLPAIEAHLDRHLKLEQWG

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=39.686684073107, Blast_Score=259, Evalue=2e-69,
Organism=Homo sapiens, GI262118318, Length=384, Percent_Identity=36.71875, Blast_Score=251, Evalue=5e-67,
Organism=Homo sapiens, GI262231852, Length=384, Percent_Identity=36.71875, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI216548263, Length=384, Percent_Identity=36.71875, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI13518015, Length=384, Percent_Identity=36.71875, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI222352149, Length=368, Percent_Identity=40.4891304347826, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI41327773, Length=364, Percent_Identity=39.010989010989, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI224593278, Length=373, Percent_Identity=37.2654155495979, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI4758138, Length=367, Percent_Identity=37.0572207084469, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI148613856, Length=348, Percent_Identity=40.2298850574713, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI38201710, Length=348, Percent_Identity=40.2298850574713, Blast_Score=227, Evalue=1e-59,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=36.4130434782609, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=36.4130434782609, Blast_Score=226, Evalue=2e-59,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=36.4130434782609, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI7661920, Length=369, Percent_Identity=34.6883468834688, Blast_Score=224, Evalue=7e-59,
Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=35.9459459459459, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=35.9459459459459, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI20149629, Length=378, Percent_Identity=35.978835978836, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI45446747, Length=382, Percent_Identity=34.5549738219895, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI45446743, Length=382, Percent_Identity=34.5549738219895, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI21071032, Length=367, Percent_Identity=36.2397820163488, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI55749865, Length=370, Percent_Identity=35.9459459459459, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI164664518, Length=375, Percent_Identity=33.0666666666667, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI50659095, Length=375, Percent_Identity=34.6666666666667, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=35.5978260869565, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI41327776, Length=377, Percent_Identity=34.2175066312997, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI4503529, Length=376, Percent_Identity=34.3085106382979, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI13129006, Length=375, Percent_Identity=33.8666666666667, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI31542656, Length=381, Percent_Identity=32.8083989501312, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI8922886, Length=388, Percent_Identity=34.020618556701, Blast_Score=185, Evalue=8e-47,
Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=31.8302387267904, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=31.8302387267904, Blast_Score=182, Evalue=3e-46,
Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=35.5013550135501, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI21040371, Length=364, Percent_Identity=30.4945054945055, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI38327634, Length=357, Percent_Identity=33.6134453781513, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI6005743, Length=388, Percent_Identity=32.7319587628866, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI188035877, Length=367, Percent_Identity=33.7874659400545, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI4758112, Length=363, Percent_Identity=29.7520661157025, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI18375623, Length=363, Percent_Identity=29.7520661157025, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI13514831, Length=361, Percent_Identity=31.5789473684211, Blast_Score=173, Evalue=2e-43,
Organism=Homo sapiens, GI62241022, Length=371, Percent_Identity=32.8840970350404, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI41327779, Length=380, Percent_Identity=31.3157894736842, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=32.6647564469914, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI38569503, Length=372, Percent_Identity=31.7204301075269, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI38569505, Length=372, Percent_Identity=31.7204301075269, Blast_Score=161, Evalue=7e-40,
Organism=Homo sapiens, GI17505907, Length=419, Percent_Identity=29.1169451073986, Blast_Score=158, Evalue=1e-38,
Organism=Homo sapiens, GI9506931, Length=407, Percent_Identity=29.4840294840295, Blast_Score=149, Evalue=3e-36,
Organism=Homo sapiens, GI256223453, Length=371, Percent_Identity=28.0323450134771, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=28.7833827893175, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI256773275, Length=381, Percent_Identity=30.1837270341207, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI9966805, Length=324, Percent_Identity=29.6296296296296, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI154759257, Length=362, Percent_Identity=27.3480662983425, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=35.4545454545455, Blast_Score=115, Evalue=7e-26,
Organism=Escherichia coli, GI1790214, Length=377, Percent_Identity=46.1538461538462, Blast_Score=327, Evalue=7e-91,
Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=42.2459893048128, Blast_Score=285, Evalue=4e-78,
Organism=Escherichia coli, GI87082221, Length=373, Percent_Identity=38.8739946380697, Blast_Score=249, Evalue=2e-67,
Organism=Escherichia coli, GI1788930, Length=376, Percent_Identity=39.6276595744681, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1787605, Length=356, Percent_Identity=37.0786516853933, Blast_Score=221, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=3e-66,
Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=39.2370572207085, Blast_Score=248, Evalue=4e-66,
Organism=Caenorhabditis elegans, GI32565321, Length=384, Percent_Identity=37.7604166666667, Blast_Score=247, Evalue=9e-66,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=37.940379403794, Blast_Score=231, Evalue=6e-61,
Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=35.1351351351351, Blast_Score=230, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI17507877, Length=377, Percent_Identity=37.4005305039788, Blast_Score=229, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71995724, Length=369, Percent_Identity=34.6883468834688, Blast_Score=224, Evalue=7e-59,
Organism=Caenorhabditis elegans, GI17507121, Length=369, Percent_Identity=34.6883468834688, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI86570094, Length=359, Percent_Identity=37.883008356546, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI17555296, Length=374, Percent_Identity=35.5614973262032, Blast_Score=222, Evalue=3e-58,
Organism=Caenorhabditis elegans, GI17507879, Length=377, Percent_Identity=36.3395225464191, Blast_Score=219, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=364, Percent_Identity=36.5384615384615, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17507881, Length=386, Percent_Identity=35.2331606217617, Blast_Score=211, Evalue=6e-55,
Organism=Caenorhabditis elegans, GI115533224, Length=349, Percent_Identity=36.9627507163324, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI17510559, Length=404, Percent_Identity=34.1584158415842, Blast_Score=207, Evalue=8e-54,
Organism=Caenorhabditis elegans, GI17507945, Length=373, Percent_Identity=34.8525469168901, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17537549, Length=365, Percent_Identity=36.986301369863, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17509811, Length=365, Percent_Identity=35.0684931506849, Blast_Score=198, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=32.0855614973262, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=30.9192200557103, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=359, Percent_Identity=30.9192200557103, Blast_Score=187, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI17552114, Length=370, Percent_Identity=30.2702702702703, Blast_Score=186, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI193208216, Length=383, Percent_Identity=33.6814621409922, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI115532546, Length=383, Percent_Identity=32.6370757180157, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=33.0749354005168, Blast_Score=175, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI115532548, Length=383, Percent_Identity=32.6370757180157, Blast_Score=174, Evalue=5e-44,
Organism=Caenorhabditis elegans, GI17505370, Length=358, Percent_Identity=34.3575418994413, Blast_Score=174, Evalue=7e-44,
Organism=Caenorhabditis elegans, GI71990816, Length=376, Percent_Identity=31.9148936170213, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=33.2439678284182, Blast_Score=167, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI17553716, Length=366, Percent_Identity=28.9617486338798, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17536099, Length=404, Percent_Identity=31.1881188118812, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17536101, Length=404, Percent_Identity=31.1881188118812, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI17536103, Length=407, Percent_Identity=31.9410319410319, Blast_Score=151, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=26.2529832935561, Blast_Score=146, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17508543, Length=382, Percent_Identity=28.7958115183246, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI193206561, Length=365, Percent_Identity=27.6712328767123, Blast_Score=140, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI17556951, Length=354, Percent_Identity=26.8361581920904, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71982862, Length=219, Percent_Identity=31.0502283105023, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=27.190332326284, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=47.8260869565217, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71997889, Length=359, Percent_Identity=25.6267409470752, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25148205, Length=339, Percent_Identity=24.7787610619469, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17566630, Length=314, Percent_Identity=25.4777070063694, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17557982, Length=396, Percent_Identity=26.010101010101, Blast_Score=83, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325138, Length=371, Percent_Identity=37.7358490566038, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=38.5674931129477, Blast_Score=241, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6321360, Length=367, Percent_Identity=37.874659400545, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6324778, Length=370, Percent_Identity=36.2162162162162, Blast_Score=234, Evalue=2e-62,
Organism=Saccharomyces cerevisiae, GI6321856, Length=381, Percent_Identity=37.2703412073491, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=365, Percent_Identity=38.0821917808219, Blast_Score=222, Evalue=8e-59,
Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=32.7913279132791, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6323947, Length=365, Percent_Identity=37.5342465753425, Blast_Score=212, Evalue=9e-56,
Organism=Saccharomyces cerevisiae, GI6324620, Length=381, Percent_Identity=35.6955380577428, Blast_Score=204, Evalue=2e-53,
Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=34.7107438016529, Blast_Score=201, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6322912, Length=367, Percent_Identity=35.4223433242507, Blast_Score=199, Evalue=9e-52,
Organism=Saccharomyces cerevisiae, GI6322323, Length=367, Percent_Identity=35.4223433242507, Blast_Score=199, Evalue=9e-52,
Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=30.8943089430894, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320173, Length=413, Percent_Identity=32.2033898305085, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6322427, Length=372, Percent_Identity=35.2150537634409, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6320119, Length=375, Percent_Identity=30.9333333333333, Blast_Score=190, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6319714, Length=385, Percent_Identity=33.5064935064935, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6321963, Length=385, Percent_Identity=33.2467532467532, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=29.3478260869565, Blast_Score=162, Evalue=6e-41,
Organism=Saccharomyces cerevisiae, GI6319618, Length=430, Percent_Identity=29.0697674418605, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=384, Percent_Identity=31.5104166666667, Blast_Score=156, Evalue=5e-39,
Organism=Saccharomyces cerevisiae, GI6321267, Length=392, Percent_Identity=30.8673469387755, Blast_Score=149, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6323306, Length=419, Percent_Identity=26.2529832935561, Blast_Score=143, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6322876, Length=426, Percent_Identity=27.4647887323944, Blast_Score=114, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324366, Length=351, Percent_Identity=28.4900284900285, Blast_Score=112, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6321374, Length=382, Percent_Identity=27.4869109947644, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=37.434554973822, Blast_Score=244, Evalue=8e-65,
Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=39.2045454545455, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI17985987, Length=373, Percent_Identity=36.9973190348526, Blast_Score=235, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24642151, Length=363, Percent_Identity=38.5674931129477, Blast_Score=235, Evalue=3e-62,
Organism=Drosophila melanogaster, GI28574962, Length=369, Percent_Identity=37.940379403794, Blast_Score=234, Evalue=7e-62,
Organism=Drosophila melanogaster, GI21355075, Length=353, Percent_Identity=38.8101983002833, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=37.5, Blast_Score=224, Evalue=9e-59,
Organism=Drosophila melanogaster, GI24644487, Length=365, Percent_Identity=36.1643835616438, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI45551833, Length=365, Percent_Identity=36.1643835616438, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24644485, Length=365, Percent_Identity=36.1643835616438, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI281361218, Length=365, Percent_Identity=36.1643835616438, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24644481, Length=365, Percent_Identity=36.1643835616438, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=35.8490566037736, Blast_Score=221, Evalue=7e-58,
Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=35.8490566037736, Blast_Score=221, Evalue=7e-58,
Organism=Drosophila melanogaster, GI24662330, Length=376, Percent_Identity=35.3723404255319, Blast_Score=220, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=35.230352303523, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI21356161, Length=366, Percent_Identity=36.3387978142077, Blast_Score=214, Evalue=9e-56,
Organism=Drosophila melanogaster, GI24585582, Length=380, Percent_Identity=34.7368421052632, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI28575014, Length=382, Percent_Identity=34.5549738219895, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI17977678, Length=362, Percent_Identity=34.5303867403315, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=35.9673024523161, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=35.9673024523161, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=35.9673024523161, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=35.9673024523161, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI281365720, Length=324, Percent_Identity=37.6543209876543, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI21355559, Length=374, Percent_Identity=34.4919786096257, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI28571808, Length=355, Percent_Identity=33.2394366197183, Blast_Score=181, Evalue=6e-46,
Organism=Drosophila melanogaster, GI28571809, Length=355, Percent_Identity=33.2394366197183, Blast_Score=181, Evalue=6e-46,
Organism=Drosophila melanogaster, GI24583281, Length=373, Percent_Identity=31.0991957104558, Blast_Score=179, Evalue=2e-45,
Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=31.0991957104558, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI17136814, Length=388, Percent_Identity=32.7319587628866, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24581954, Length=374, Percent_Identity=31.0160427807487, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24581952, Length=374, Percent_Identity=31.0160427807487, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24581956, Length=374, Percent_Identity=31.0160427807487, Blast_Score=178, Evalue=6e-45,
Organism=Drosophila melanogaster, GI24666101, Length=376, Percent_Identity=32.9787234042553, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24642822, Length=398, Percent_Identity=30.4020100502513, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI20130173, Length=442, Percent_Identity=28.5067873303167, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI19920478, Length=362, Percent_Identity=31.4917127071823, Blast_Score=159, Evalue=2e-39,
Organism=Drosophila melanogaster, GI17647335, Length=369, Percent_Identity=31.7073170731707, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI24643725, Length=403, Percent_Identity=30.0248138957816, Blast_Score=148, Evalue=5e-36,
Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=29.483282674772, Blast_Score=134, Evalue=8e-32,
Organism=Drosophila melanogaster, GI17136666, Length=426, Percent_Identity=27.4647887323944, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI28571338, Length=251, Percent_Identity=30.6772908366534, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI18859659, Length=251, Percent_Identity=30.6772908366534, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24640164, Length=355, Percent_Identity=24.7887323943662, Blast_Score=105, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 43138; Mature: 43138

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEFITFADLSLSDSILRSVNDLGFTELTGIQAQILPHTLAGQDAIGQAQTGTGKTATFL
CCCEEEEECCCCCHHHHHHHHHCCCHHHCCCCCEECCHHHCCCCCCCCCCCCCCCHHHHH
ITIIEALLKRPFADDEMRYIGEPRALILAPTRELANQIYDDAIALTKHTSLHSVCVMGGI
HHHHHHHHHCCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHEEEECCC
DYDKQIAALDKSYTDILIATPGRLIDLIYKGHVFLDRIEAFVLDEADRMLDMGFIPDIKR
CCCHHHHHHCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LMRYMPPNTDRQSLLFSATFNQDVMNLAYQWLMNPVFVEIEPEHKTSDLVEQHFYLLTEA
HHHHCCCCCCHHHEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHEEEECC
DKHQALIQILAQPETKKVIVFANRKDQVKRLYTKLSADHNVVMLSGDVDQAKRERYLDKF
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
KNGNAKVLVATDVAGRGIHVDDISHVVNYTLPDQPDDYVHRIGRTGRAGQKGISISFVSE
CCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECC
DDAFNLPAIEAHLDRHLKLEQWG
CCCCCCCHHHHHHHCCCEECCCC
>Mature Secondary Structure
MDEFITFADLSLSDSILRSVNDLGFTELTGIQAQILPHTLAGQDAIGQAQTGTGKTATFL
CCCEEEEECCCCCHHHHHHHHHCCCHHHCCCCCEECCHHHCCCCCCCCCCCCCCCHHHHH
ITIIEALLKRPFADDEMRYIGEPRALILAPTRELANQIYDDAIALTKHTSLHSVCVMGGI
HHHHHHHHHCCCCCCHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCHHHEEEECCC
DYDKQIAALDKSYTDILIATPGRLIDLIYKGHVFLDRIEAFVLDEADRMLDMGFIPDIKR
CCCHHHHHHCCCCCEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LMRYMPPNTDRQSLLFSATFNQDVMNLAYQWLMNPVFVEIEPEHKTSDLVEQHFYLLTEA
HHHHCCCCCCHHHEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHEEEECC
DKHQALIQILAQPETKKVIVFANRKDQVKRLYTKLSADHNVVMLSGDVDQAKRERYLDKF
HHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHH
KNGNAKVLVATDVAGRGIHVDDISHVVNYTLPDQPDDYVHRIGRTGRAGQKGISISFVSE
CCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECC
DDAFNLPAIEAHLDRHLKLEQWG
CCCCCCCHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]