| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is fepD [C]
Identifier: 148652553
GI number: 148652553
Start: 887311
End: 888348
Strand: Direct
Name: fepD [C]
Synonym: PsycPRwf_0744
Alternate gene names: 148652553
Gene position: 887311-888348 (Clockwise)
Preceding gene: 148652552
Following gene: 148652554
Centisome position: 29.79
GC content: 48.17
Gene sequence:
>1038_bases ATGACCCAAATAATGAGCAAACACATCATTCGTGAGCAACGACGAATAGAGAACAAGCGCCGTATGGTATTGTTGGTGTT TGCGATAGCGTGTCTTGTGGGACTGGTTTTGGATGTGATGACTGGTCCTTCGATGCTGCCTGTAAGGGATGTGATTGAGG CTTTATTACGCTTAAGCGGTGTCGAGGATACCACGCATACCATTATCTATGATTTGCGTCTGCCCATTGCTTTGATGGCA TTATTGGTTGGTGCCTCACTTGGGGCGGGCGGCGCTGAAATGCAAACCTTATTAAATAACCCGATGGCCAGCCCTTATAC ATTGGGGTTGGCAGCCGCCGCAGGGTTTGGCGCGTCATTGGTGATTGCCTTTGGCGGCTTTGGGTTGCCTTTGCAATATG CGGTGCCGATCGGGGCATTCGCCATGACCATGCTGGCCTCAGCAGTACTGTTCTTATTCGCCTCTTTAAAGCAATTTGCC GCCGCTACTTTGATTTTGGTGGGTATTGCACTTTTGTTTATTTTTCAATCGCTATTATCCTTGGTGCAATTTATCGCATC CCCTGAAGTCTCCCAACAAATTCTATTTTGGCTCTTTGGTAACCTCAACAAAGCCACCTGGACCAACCTTGCCGTGGTTG CTGTGGTCAGTACGGTGTGTATTACCTTACTTATGCGAGATGGTTGGCAATTAACCGCGCTACGTCTGGGCGAAGAAAGA GCAGCGGCACTTGGTGTCAACTTAACAAGGCTGCGGATCAGAACCCTTATTTTGGTGGCTATGATGACCGCAACGGCGAT TAGTTTTGTCGGGGTTATTGGGTTTATTGGCTTGGTTGCCCCGCATGTGGCCCGTCTCTTGGTTGGTGAGGATCAACGCT ATTTTTTACCCGCGACCATGCTGGCGGGAGCCGCTTTTTTATCATTTTCATCGGTGTTGTCTAAAGTCATTATTCCTGGG GCATTATTCCCTGTGGGTATTGTGACCTCTTTTGTGGGCGTGCCTTTTTTATTTTGGATTATTTGGAGTAAACGATGA
Upstream 100 bases:
>100_bases TTAATTGCGAACCCTTCTCATTACTATTATAATCCTCAGTCCAATTATCAAGTGAATAACTAGGGTTGTTTCATACTGCT CTAACCCTGTGGATTATTAA
Downstream 100 bases:
>100_bases GACAAGCTATTCGTGCCACATTGGCAGCAGCAGTATTAATGGCAACGATGAACTCACAAGCTGAAGTTAAGACCATTCAT GATGTGTTAGGGCGTGATGT
Product: transport system permease
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MTQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSGVEDTTHTIIYDLRLPIALMA LLVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASLVIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFA AATLILVGIALLFIFQSLLSLVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEER AAALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATMLAGAAFLSFSSVLSKVIIPG ALFPVGIVTSFVGVPFLFWIIWSKR
Sequences:
>Translated_345_residues MTQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSGVEDTTHTIIYDLRLPIALMA LLVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASLVIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFA AATLILVGIALLFIFQSLLSLVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEER AAALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATMLAGAAFLSFSSVLSKVIIPG ALFPVGIVTSFVGVPFLFWIIWSKR >Mature_344_residues TQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSGVEDTTHTIIYDLRLPIALMAL LVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASLVIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFAA ATLILVGIALLFIFQSLLSLVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEERA AALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATMLAGAAFLSFSSVLSKVIIPGA LFPVGIVTSFVGVPFLFWIIWSKR
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=317, Percent_Identity=36.5930599369085, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1790741, Length=311, Percent_Identity=33.4405144694534, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1790740, Length=279, Percent_Identity=32.9749103942652, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1788004, Length=277, Percent_Identity=31.4079422382672, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786804, Length=328, Percent_Identity=30.4878048780488, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786347, Length=350, Percent_Identity=30.2857142857143, Blast_Score=96, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 37066; Mature: 36935
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC VEDTTHTIIYDLRLPIALMALLVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH VIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFAAATLILVGIALLFIFQSLLS HHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEER HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHH AAALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATM HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH LAGAAFLSFSSVLSKVIIPGALFPVGIVTSFVGVPFLFWIIWSKR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC VEDTTHTIIYDLRLPIALMALLVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH VIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFAAATLILVGIALLFIFQSLLS HHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEER HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHH AAALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATM HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH LAGAAFLSFSSVLSKVIIPGALFPVGIVTSFVGVPFLFWIIWSKR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]