Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is fepD [C]

Identifier: 148652553

GI number: 148652553

Start: 887311

End: 888348

Strand: Direct

Name: fepD [C]

Synonym: PsycPRwf_0744

Alternate gene names: 148652553

Gene position: 887311-888348 (Clockwise)

Preceding gene: 148652552

Following gene: 148652554

Centisome position: 29.79

GC content: 48.17

Gene sequence:

>1038_bases
ATGACCCAAATAATGAGCAAACACATCATTCGTGAGCAACGACGAATAGAGAACAAGCGCCGTATGGTATTGTTGGTGTT
TGCGATAGCGTGTCTTGTGGGACTGGTTTTGGATGTGATGACTGGTCCTTCGATGCTGCCTGTAAGGGATGTGATTGAGG
CTTTATTACGCTTAAGCGGTGTCGAGGATACCACGCATACCATTATCTATGATTTGCGTCTGCCCATTGCTTTGATGGCA
TTATTGGTTGGTGCCTCACTTGGGGCGGGCGGCGCTGAAATGCAAACCTTATTAAATAACCCGATGGCCAGCCCTTATAC
ATTGGGGTTGGCAGCCGCCGCAGGGTTTGGCGCGTCATTGGTGATTGCCTTTGGCGGCTTTGGGTTGCCTTTGCAATATG
CGGTGCCGATCGGGGCATTCGCCATGACCATGCTGGCCTCAGCAGTACTGTTCTTATTCGCCTCTTTAAAGCAATTTGCC
GCCGCTACTTTGATTTTGGTGGGTATTGCACTTTTGTTTATTTTTCAATCGCTATTATCCTTGGTGCAATTTATCGCATC
CCCTGAAGTCTCCCAACAAATTCTATTTTGGCTCTTTGGTAACCTCAACAAAGCCACCTGGACCAACCTTGCCGTGGTTG
CTGTGGTCAGTACGGTGTGTATTACCTTACTTATGCGAGATGGTTGGCAATTAACCGCGCTACGTCTGGGCGAAGAAAGA
GCAGCGGCACTTGGTGTCAACTTAACAAGGCTGCGGATCAGAACCCTTATTTTGGTGGCTATGATGACCGCAACGGCGAT
TAGTTTTGTCGGGGTTATTGGGTTTATTGGCTTGGTTGCCCCGCATGTGGCCCGTCTCTTGGTTGGTGAGGATCAACGCT
ATTTTTTACCCGCGACCATGCTGGCGGGAGCCGCTTTTTTATCATTTTCATCGGTGTTGTCTAAAGTCATTATTCCTGGG
GCATTATTCCCTGTGGGTATTGTGACCTCTTTTGTGGGCGTGCCTTTTTTATTTTGGATTATTTGGAGTAAACGATGA

Upstream 100 bases:

>100_bases
TTAATTGCGAACCCTTCTCATTACTATTATAATCCTCAGTCCAATTATCAAGTGAATAACTAGGGTTGTTTCATACTGCT
CTAACCCTGTGGATTATTAA

Downstream 100 bases:

>100_bases
GACAAGCTATTCGTGCCACATTGGCAGCAGCAGTATTAATGGCAACGATGAACTCACAAGCTGAAGTTAAGACCATTCAT
GATGTGTTAGGGCGTGATGT

Product: transport system permease

Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MTQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSGVEDTTHTIIYDLRLPIALMA
LLVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASLVIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFA
AATLILVGIALLFIFQSLLSLVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEER
AAALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATMLAGAAFLSFSSVLSKVIIPG
ALFPVGIVTSFVGVPFLFWIIWSKR

Sequences:

>Translated_345_residues
MTQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSGVEDTTHTIIYDLRLPIALMA
LLVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASLVIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFA
AATLILVGIALLFIFQSLLSLVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEER
AAALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATMLAGAAFLSFSSVLSKVIIPG
ALFPVGIVTSFVGVPFLFWIIWSKR
>Mature_344_residues
TQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSGVEDTTHTIIYDLRLPIALMAL
LVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASLVIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFAA
ATLILVGIALLFIFQSLLSLVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEERA
AALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATMLAGAAFLSFSSVLSKVIIPGA
LFPVGIVTSFVGVPFLFWIIWSKR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786805, Length=317, Percent_Identity=36.5930599369085, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1790741, Length=311, Percent_Identity=33.4405144694534, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1790740, Length=279, Percent_Identity=32.9749103942652, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788004, Length=277, Percent_Identity=31.4079422382672, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1786804, Length=328, Percent_Identity=30.4878048780488, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786347, Length=350, Percent_Identity=30.2857142857143, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 37066; Mature: 36935

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
VEDTTHTIIYDLRLPIALMALLVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH
VIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFAAATLILVGIALLFIFQSLLS
HHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEER
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHH
AAALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH
LAGAAFLSFSSVLSKVIIPGALFPVGIVTSFVGVPFLFWIIWSKR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQIMSKHIIREQRRIENKRRMVLLVFAIACLVGLVLDVMTGPSMLPVRDVIEALLRLSG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
VEDTTHTIIYDLRLPIALMALLVGASLGAGGAEMQTLLNNPMASPYTLGLAAAAGFGASL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH
VIAFGGFGLPLQYAVPIGAFAMTMLASAVLFLFASLKQFAAATLILVGIALLFIFQSLLS
HHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVQFIASPEVSQQILFWLFGNLNKATWTNLAVVAVVSTVCITLLMRDGWQLTALRLGEER
HHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCHHH
AAALGVNLTRLRIRTLILVAMMTATAISFVGVIGFIGLVAPHVARLLVGEDQRYFLPATM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH
LAGAAFLSFSSVLSKVIIPGALFPVGIVTSFVGVPFLFWIIWSKR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]

Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]