| Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009524 |
| Length | 2,978,976 |
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The map label for this gene is 148652375
Identifier: 148652375
GI number: 148652375
Start: 675528
End: 676490
Strand: Direct
Name: 148652375
Synonym: PsycPRwf_0563
Alternate gene names: NA
Gene position: 675528-676490 (Clockwise)
Preceding gene: 148652372
Following gene: 148652379
Centisome position: 22.68
GC content: 45.9
Gene sequence:
>963_bases ATGATAAAAATAAAGGATGCGGGCCAATTACCGGCCATAGGATTGGTCATTGGGTGCGTCATTTTTGGACTAGGCAGTCT AATTGTGGCTCATGTGGATGTGGGCGGCTATGCCATGGCCTTTTGGCGATTGGCCATATCCGGAATAGTGTTTACCTTAT TGGCCGCTGTGTTCGGTCAAAAAATGCCAGTCGACAAAGGCAGTCAAGCCAATAAAAAAGCATTTATATTTGCGCTGCTG TCGGGGGTGTTTTTAGGGTTTGATTTGGCACTGTGGCACGAAAGCATTTATGCAGTGGGCCCAGGCATATCAACCTTATT AAATAGCTTACAGATTTTCTTTTTAGCAGCGCTTGGGTTTTTGTTATTTAAAGAGCGTCAAACCATAATTCAGCTCATCA GCCTCATCATTGCGCTGGCAGGCGTCGTGTTTATTGCTAGCCCTGAGTTTGCCAATAACAATCATGCCGCTTACGGGTTT ATCACCGGCATCGTCTCAGCGGCTATGTTAGCGGCCTCAATGACTTTTATCCGCTTAACTCATCAAAACGCGCCCACACC GATTTTTATCTTGATGCAGCGTATTAGTATTGGCGGCAGTCTGGCAATGCTTATCCCCATGTTTTTATTTGATGCTGGCA AAATACTGCCCAACTCTTTGGCGGAGATAGGCTGGATATTGATATATGGAACGGTGATGCAGTGCTTGGCATGGGGACTT ATCGCCTACTCAATCCCTAAGCTGTCTTTGGCATTAACCGGACTGCTGCTGCTGACAGAGCCTGTGGCTGCGTTATTTAT TGATTACTTTTGGTTAGATAAGCCAATCAATACCATCCAATGGACGGGAGCTGCCCTGACCATGTTTGCCATTTATTTAG GATCATTAAAGCCCAAGCCCTTTAATGAGACACTCAAGCTGCGCCGCTATCGATTCTTTGCAAAGTTTTATCGGCGCCGT TAG
Upstream 100 bases:
>100_bases AACCCACTTTAAGCTTATTTTGCAACACATTTAAGTCTGGGAATTTTAGAAAAATATTGGCCCTAAGTGGCCGATAGATT TGAACGCGCTAGGTTGGTAT
Downstream 100 bases:
>100_bases TAGTCACATCAACCGTTAGAAGTTAAGTAAATAGCTATTCAGTTAGGACTGCCAAAAAAAAGCCGAGCTTTGACAGCTCG GCTTTTTTAACGGTAGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: DMT Superfamily Efflux Pump; Permease Of Drug/Metabolite Transporter Superfamily
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQKMPVDKGSQANKKAFIFALL SGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGFLLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGF ITGIVSAAMLAASMTFIRLTHQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKPFNETLKLRRYRFFAKFYRRR
Sequences:
>Translated_320_residues MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQKMPVDKGSQANKKAFIFALL SGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGFLLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGF ITGIVSAAMLAASMTFIRLTHQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKPFNETLKLRRYRFFAKFYRRR >Mature_320_residues MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQKMPVDKGSQANKKAFIFALL SGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGFLLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGF ITGIVSAAMLAASMTFIRLTHQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKPFNETLKLRRYRFFAKFYRRR
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35022; Mature: 35022
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQ CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KMPVDKGSQANKKAFIFALLSGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGFITGIVSAAMLAASMTFIRLT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE HQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHH IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECHHHHHHHHHHHHCCCCCC FNETLKLRRYRFFAKFYRRR CHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKIKDAGQLPAIGLVIGCVIFGLGSLIVAHVDVGGYAMAFWRLAISGIVFTLLAAVFGQ CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KMPVDKGSQANKKAFIFALLSGVFLGFDLALWHESIYAVGPGISTLLNSLQIFFLAALGF CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LLFKERQTIIQLISLIIALAGVVFIASPEFANNNHAAYGFITGIVSAAMLAASMTFIRLT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEE HQNAPTPIFILMQRISIGGSLAMLIPMFLFDAGKILPNSLAEIGWILIYGTVMQCLAWGL CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCHHHHHHHHHHHHHHHHHHHHHHHH IAYSIPKLSLALTGLLLLTEPVAALFIDYFWLDKPINTIQWTGAALTMFAIYLGSLKPKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECHHHHHHHHHHHHCCCCCC FNETLKLRRYRFFAKFYRRR CHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA