Definition Psychrobacter sp. PRwf-1 chromosome, complete genome.
Accession NC_009524
Length 2,978,976

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The map label for this gene is yedI [H]

Identifier: 148652290

GI number: 148652290

Start: 568093

End: 569010

Strand: Direct

Name: yedI [H]

Synonym: PsycPRwf_0478

Alternate gene names: 148652290

Gene position: 568093-569010 (Clockwise)

Preceding gene: 148652287

Following gene: 148652292

Centisome position: 19.07

GC content: 46.3

Gene sequence:

>918_bases
ATGGCAGGTGGTAGCTTACTAATGCTGCTCGATGATATTAGCGTGATTATGGATGATGTCTCGGTAATGACCAAAGTGGC
GGCCAAAAAGACCGTCGGCGTGCTGGGGGATGATCTTGCGCTAAATGCTGAGCAGGTAAGCGGGGTCAAGCCTAGCCGTG
AGCTCCCTGTGGTCTGGGCAGTAGCAAAAGGCTCCATGATAAATAAGTTTATCTTGGTACCTGCCGCGCTTCTTATCAGC
TACTTTGTGCCGTGGCTTATCACGCCTTTACTTATGGTGGGTGGCTTGTTCTTATGTTACGAGGGTGCCGAAAAGGTTAT
TCATAAATTTTGGCCAAAGCTGTTGCCCCATGATGAAGAGCAGCAGGCGCGCATCCATGCCAATGCAGATGACACTGTGG
ACTTGGTTGCGCTTGAGAAGCAGAAAGTAAAAGGTGCCATTCGAACTGATTTTATCTTATCGGCTGAAATTGTGGTGATT
GGCTTAGGGACGTTAAGTGCCGCCAATTTATTAGACAAAGCGATTGTGCTGTCTGTTCTAGCCATTGGGGTTACCATTGG
TATTTATGGCCTAGTGGCAGGTATTGTTAAGATTGATGACTTGGGGCTGCACATGATGCAAAGACCAGGTGCAAGTAAGA
TAACCCAAAAAATCGGTGAATTCTTATTGTCAGCGGCTCCCAAGCTTATGAAGTTTTTGACCATCGTAGGCACTATTGCC
ATGTTCTTAGTCGGTGGTGGCATCATCGTACATGGTATCGGTTATCTACACCATGCGGTAGAGGACATTGCACACTTATC
TGGTGTATTTGAAGGGTTATCTACCAATCTATTAAATGGTGCCATAGGTTTTGTCATTGGGGTGGTGCTGTTATTTATAT
TAACTGCCATCTCAAAAATGCGCGGTGACGCCCACTAA

Upstream 100 bases:

>100_bases
GTAAGGCGCGTTAGAGGCTTTTATGAGCTTTATGGCTGAGTAAGTAGAGGCAATAAGGATTTAAATACATCATAACATAG
GTAATAACTAAGGAGATTTT

Downstream 100 bases:

>100_bases
GATTATCATCAAGACGCCAGCTCTAAACCAAAAACAAGACTCAACAAAAAGGCCACTTAATTTATTAAGTGGCCTTTTTG
TTATTAGGATGATGAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MAGGSLLMLLDDISVIMDDVSVMTKVAAKKTVGVLGDDLALNAEQVSGVKPSRELPVVWAVAKGSMINKFILVPAALLIS
YFVPWLITPLLMVGGLFLCYEGAEKVIHKFWPKLLPHDEEQQARIHANADDTVDLVALEKQKVKGAIRTDFILSAEIVVI
GLGTLSAANLLDKAIVLSVLAIGVTIGIYGLVAGIVKIDDLGLHMMQRPGASKITQKIGEFLLSAAPKLMKFLTIVGTIA
MFLVGGGIIVHGIGYLHHAVEDIAHLSGVFEGLSTNLLNGAIGFVIGVVLLFILTAISKMRGDAH

Sequences:

>Translated_305_residues
MAGGSLLMLLDDISVIMDDVSVMTKVAAKKTVGVLGDDLALNAEQVSGVKPSRELPVVWAVAKGSMINKFILVPAALLIS
YFVPWLITPLLMVGGLFLCYEGAEKVIHKFWPKLLPHDEEQQARIHANADDTVDLVALEKQKVKGAIRTDFILSAEIVVI
GLGTLSAANLLDKAIVLSVLAIGVTIGIYGLVAGIVKIDDLGLHMMQRPGASKITQKIGEFLLSAAPKLMKFLTIVGTIA
MFLVGGGIIVHGIGYLHHAVEDIAHLSGVFEGLSTNLLNGAIGFVIGVVLLFILTAISKMRGDAH
>Mature_304_residues
AGGSLLMLLDDISVIMDDVSVMTKVAAKKTVGVLGDDLALNAEQVSGVKPSRELPVVWAVAKGSMINKFILVPAALLISY
FVPWLITPLLMVGGLFLCYEGAEKVIHKFWPKLLPHDEEQQARIHANADDTVDLVALEKQKVKGAIRTDFILSAEIVVIG
LGTLSAANLLDKAIVLSVLAIGVTIGIYGLVAGIVKIDDLGLHMMQRPGASKITQKIGEFLLSAAPKLMKFLTIVGTIAM
FLVGGGIIVHGIGYLHHAVEDIAHLSGVFEGLSTNLLNGAIGFVIGVVLLFILTAISKMRGDAH

Specific function: Unknown

COG id: COG2354

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788268, Length=307, Percent_Identity=57.6547231270358, Blast_Score=322, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008526 [H]

Pfam domain/function: PF05661 DUF808 [H]

EC number: NA

Molecular weight: Translated: 32387; Mature: 32256

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGSLLMLLDDISVIMDDVSVMTKVAAKKTVGVLGDDLALNAEQVSGVKPSRELPVVWA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEE
VAKGSMINKFILVPAALLISYFVPWLITPLLMVGGLFLCYEGAEKVIHKFWPKLLPHDEE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QQARIHANADDTVDLVALEKQKVKGAIRTDFILSAEIVVIGLGTLSAANLLDKAIVLSVL
CHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHEECCEEEEECCHHHHHHHHHHHHHHHHH
AIGVTIGIYGLVAGIVKIDDLGLHMMQRPGASKITQKIGEFLLSAAPKLMKFLTIVGTIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFLVGGGIIVHGIGYLHHAVEDIAHLSGVFEGLSTNLLNGAIGFVIGVVLLFILTAISKM
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGDAH
CCCCC
>Mature Secondary Structure 
AGGSLLMLLDDISVIMDDVSVMTKVAAKKTVGVLGDDLALNAEQVSGVKPSRELPVVWA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEE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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]