| Definition | Methanobrevibacter smithii ATCC 35061 chromosome, complete genome. |
|---|---|
| Accession | NC_009515 |
| Length | 1,853,160 |
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The map label for this gene is 148643547
Identifier: 148643547
GI number: 148643547
Start: 1511086
End: 1511589
Strand: Reverse
Name: 148643547
Synonym: Msm_1487
Alternate gene names: NA
Gene position: 1511589-1511086 (Counterclockwise)
Preceding gene: 148643548
Following gene: 148643541
Centisome position: 81.57
GC content: 31.35
Gene sequence:
>504_bases ATGAGTGATACTATGAATAAAAAATATTTAATTATAATTTTATTAATACCTTTAATCATGTCTGCTGTATACGGACATGG AGTTGATGTAACTGCTGATACAATGGTTATCGCAGATGAAACAAACGGACAGTTAGCTAAAGACATAGCTGATTCAAACG GAATGAATATCAGTGTTTATAAATTTACTTCACAGGCTGATGTGGAACATATTTTAGAACACAGTGTAAACAACACAAAC AAACGCATACTAATGATAGCTTATCAGGACAGCGGAAATGAATTTTTAAAGAAACATTCAGAAGTATCTGATAGGGTTAT TGTAGTTGACGACGTTAACAATGATACAATAGAAGACGGATTAAATAAAATAATGAATGCACCAACACAAAATGAAGAGT CTCAAAGTTCATTTGCTGTGCCGTTATTCATTGGATTAATAATAGGTATTCTTATTGGTGCACCAATTGGAGTGCTTTTA ATGAAAAGAAAAAATAAGGAATAA
Upstream 100 bases:
>100_bases TTGCTCCCATTTTATTTATTTATATCAATAATTGAAGGAGCTGCAAATGTGGTTATTATAAGTGCAATTAAAACTATGAA ACCTGAAATAATGGAGATTA
Downstream 100 bases:
>100_bases AAATTCCTTTAACTCCTTTTTTTAAAAAATAAAGTATAACTTAAAAAAGTCAATATATAAAAAGCTAATTTTCTAATTTT AATAAAAAAAGTAAATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MSDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVYKFTSQADVEHILEHSVNNTN KRILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDGLNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLL MKRKNKE
Sequences:
>Translated_167_residues MSDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVYKFTSQADVEHILEHSVNNTN KRILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDGLNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLL MKRKNKE >Mature_166_residues SDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVYKFTSQADVEHILEHSVNNTNK RILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDGLNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLLM KRKNKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18391; Mature: 18260
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVY CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE KFTSQADVEHILEHSVNNTNKRILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDG EECCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHH LNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLLMKRKNKE HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC >Mature Secondary Structure SDTMNKKYLIIILLIPLIMSAVYGHGVDVTADTMVIADETNGQLAKDIADSNGMNISVY CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEEE KFTSQADVEHILEHSVNNTNKRILMIAYQDSGNEFLKKHSEVSDRVIVVDDVNNDTIEDG EECCHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHH LNKIMNAPTQNEESQSSFAVPLFIGLIIGILIGAPIGVLLMKRKNKE HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA