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The map label for this gene is nudF [H]

Identifier: 148643415

GI number: 148643415

Start: 1379546

End: 1379968

Strand: Reverse

Name: nudF [H]

Synonym: Msm_1355

Alternate gene names: 148643415

Gene position: 1379968-1379546 (Counterclockwise)

Preceding gene: 148643416

Following gene: 148643414

Centisome position: 74.47

GC content: 32.15

Gene sequence:

>423_bases
ATGGGAGATTATAAAATTCCTTCATTAACCACAGACATTTTTATTTTTGATGAAAACACTGATTTTATTCTTATTAAACG
AAAAAATGATCCATTTAAAAATCATTGGGCTCTTCCAGGAGGCTTTGTAGAATATGGTGAAACTGTAGAAACAGCAGCTA
TTCGTGAAGCTAAAGAAGAAACAAACATTGATGTAGAACTGTTAGATTTAGTTAATGTTTACTCAAAACCTGATAGAGAC
CCTCGTGGGCACACAATAACCGTAGCTTATATAGCCAAAGGAAATATGGATAATAAAAAAGCAGATAGTGATGCCTGTGA
AATAGGTATTTTTTCCCAAAAAGATTTGGTCAACATCGAACTTGCTTTCGACCATGCAAAAATTATTAACGATTGTTTAA
ATGCCGTTTCAAGTAAATTTTAA

Upstream 100 bases:

>100_bases
AGCAGCTAGCCAACTTAAAGATGATGCTGCAGACTTTAAAAAACTTATTGAAGAAACTTTATAACTTCAATAAAAACTTA
TTTTATTTTGAGGGGATATG

Downstream 100 bases:

>100_bases
TGTTAAAAAATAGTAAAAATATAAATAACTTGAGAATATAATTTAAAATGTTATAAAAGTTTTGATAAGAAAAAATTATA
TAAGGGGTTAAAAAATATGG

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MGDYKIPSLTTDIFIFDENTDFILIKRKNDPFKNHWALPGGFVEYGETVETAAIREAKEETNIDVELLDLVNVYSKPDRD
PRGHTITVAYIAKGNMDNKKADSDACEIGIFSQKDLVNIELAFDHAKIINDCLNAVSSKF

Sequences:

>Translated_140_residues
MGDYKIPSLTTDIFIFDENTDFILIKRKNDPFKNHWALPGGFVEYGETVETAAIREAKEETNIDVELLDLVNVYSKPDRD
PRGHTITVAYIAKGNMDNKKADSDACEIGIFSQKDLVNIELAFDHAKIINDCLNAVSSKF
>Mature_139_residues
GDYKIPSLTTDIFIFDENTDFILIKRKNDPFKNHWALPGGFVEYGETVETAAIREAKEETNIDVELLDLVNVYSKPDRDP
RGHTITVAYIAKGNMDNKKADSDACEIGIFSQKDLVNIELAFDHAKIINDCLNAVSSKF

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 15758; Mature: 15627

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDYKIPSLTTDIFIFDENTDFILIKRKNDPFKNHWALPGGFVEYGETVETAAIREAKEE
CCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH
TNIDVELLDLVNVYSKPDRDPRGHTITVAYIAKGNMDNKKADSDACEIGIFSQKDLVNIE
CCCCEEHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEE
LAFDHAKIINDCLNAVSSKF
EECCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDYKIPSLTTDIFIFDENTDFILIKRKNDPFKNHWALPGGFVEYGETVETAAIREAKEE
CCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHH
TNIDVELLDLVNVYSKPDRDPRGHTITVAYIAKGNMDNKKADSDACEIGIFSQKDLVNIE
CCCCEEHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEE
LAFDHAKIINDCLNAVSSKF
EECCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]