Click here to switch to the map view.

The map label for this gene is 148643300

Identifier: 148643300

GI number: 148643300

Start: 1244199

End: 1244936

Strand: Reverse

Name: 148643300

Synonym: Msm_1240

Alternate gene names: NA

Gene position: 1244936-1244199 (Counterclockwise)

Preceding gene: 148643301

Following gene: 148643296

Centisome position: 67.18

GC content: 31.03

Gene sequence:

>738_bases
ATGGCTAAAAAATCAACAGGTTTAGGTAAAGGATTAGATTCTTTAATTCCTGATTTTTATGATGAGGATTTTGACAGTAA
TTCTGCAGTATCTTTAGAAGACATGTTAGGTGAAGATGAAAAACAGGAAGAATCTAACGAGGATGTTGTAGAAAATGTTG
ATGAAGATAATTATTCTAATGAAGAAATTGTAGAAGAAACTTCTGAAAATGATGAATCTAGCGAGAAAATTGTGGAGAAA
ATTTCTGAAAATGAAGAGTCCAGTGATAAAATTGTAGAAGATACAAAATCTTTTGATGATGATACTTGTGAAGAAGAGGA
ATCTAGTGAAGATATTGTAGATGATGAAAATATTCAAGAAAATATTGTAGAAGAAGATGAATCTAGTGAAAACCAACAAA
TAGATACTGTGGAAGATGATACTGATGAGGATATCAACCAAGAGGAAGCTGAAAATATTGAAACATCATCCGAAGACTTA
CCTGGCAGTGAAAGTGATGAAGAAAGCATACAAGATCAAAAAGAACAGGAAAAAATTTTAGAGAATGTGGCTGAAGTTAA
AGAGATTGTTGATAAAAATCCAAGAATAACTTTATGGTCTTCACAATCTGCAGCAGTATTCAGGTATTTAAGAAAAACAG
AACCTGAATTCAGTATTAGTAAAGAAGCTTCAGTTTTAATTGATGAAGCGGTTTCTAAAAAATATCCTGAGATTTGGGAA
TTATTCGAAGATATCTAA

Upstream 100 bases:

>100_bases
TTATGGTAAACCTTGTTTAATTTATGATTCTGAAAGTACAGGTACAAAAGCTTATCTAAGTTTAGCTAAAGAAATTATAG
AACGTGATGGAGGTAATTAG

Downstream 100 bases:

>100_bases
ACTAGGCTGATATTCTCCATCTAATTTAATGTATTTTTCAGCCCTATTTACAGCTATTCCCAATCTTTTTAACTCTTCTT
TTTTTGTAAACTTATATCTT

Product: AAA ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MAKKSTGLGKGLDSLIPDFYDEDFDSNSAVSLEDMLGEDEKQEESNEDVVENVDEDNYSNEEIVEETSENDESSEKIVEK
ISENEESSDKIVEDTKSFDDDTCEEEESSEDIVDDENIQENIVEEDESSENQQIDTVEDDTDEDINQEEAENIETSSEDL
PGSESDEESIQDQKEQEKILENVAEVKEIVDKNPRITLWSSQSAAVFRYLRKTEPEFSISKEASVLIDEAVSKKYPEIWE
LFEDI

Sequences:

>Translated_245_residues
MAKKSTGLGKGLDSLIPDFYDEDFDSNSAVSLEDMLGEDEKQEESNEDVVENVDEDNYSNEEIVEETSENDESSEKIVEK
ISENEESSDKIVEDTKSFDDDTCEEEESSEDIVDDENIQENIVEEDESSENQQIDTVEDDTDEDINQEEAENIETSSEDL
PGSESDEESIQDQKEQEKILENVAEVKEIVDKNPRITLWSSQSAAVFRYLRKTEPEFSISKEASVLIDEAVSKKYPEIWE
LFEDI
>Mature_244_residues
AKKSTGLGKGLDSLIPDFYDEDFDSNSAVSLEDMLGEDEKQEESNEDVVENVDEDNYSNEEIVEETSENDESSEKIVEKI
SENEESSDKIVEDTKSFDDDTCEEEESSEDIVDDENIQENIVEEDESSENQQIDTVEDDTDEDINQEEAENIETSSEDLP
GSESDEESIQDQKEQEKILENVAEVKEIVDKNPRITLWSSQSAAVFRYLRKTEPEFSISKEASVLIDEAVSKKYPEIWEL
FEDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27944; Mature: 27813

Theoretical pI: Translated: 3.50; Mature: 3.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKSTGLGKGLDSLIPDFYDEDFDSNSAVSLEDMLGEDEKQEESNEDVVENVDEDNYSN
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCHHHHHHCCCCCCCC
EEIVEETSENDESSEKIVEKISENEESSDKIVEDTKSFDDDTCEEEESSEDIVDDENIQE
HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHH
NIVEEDESSENQQIDTVEDDTDEDINQEEAENIETSSEDLPGSESDEESIQDQKEQEKIL
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ENVAEVKEIVDKNPRITLWSSQSAAVFRYLRKTEPEFSISKEASVLIDEAVSKKYPEIWE
HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
LFEDI
HHHCC
>Mature Secondary Structure 
AKKSTGLGKGLDSLIPDFYDEDFDSNSAVSLEDMLGEDEKQEESNEDVVENVDEDNYSN
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHCCHHHHHHCCCCCCCC
EEIVEETSENDESSEKIVEKISENEESSDKIVEDTKSFDDDTCEEEESSEDIVDDENIQE
HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHH
NIVEEDESSENQQIDTVEDDTDEDINQEEAENIETSSEDLPGSESDEESIQDQKEQEKIL
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
ENVAEVKEIVDKNPRITLWSSQSAAVFRYLRKTEPEFSISKEASVLIDEAVSKKYPEIWE
HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHH
LFEDI
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA